Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold10G05148 Striga asiatica HOM05D007452 ORTHO05D009375 1.2e-62 243.0 128 100.0
Migut.J01126 Erythranthe guttata HOM05D007452 ORTHO05D009375 5.8e-49 197.6 128 79.7
SalBow6G2888 Salvia bowleyana HOM05D007452 ORTHO05D009375 5.0e-48 194.5 128 78.9
MSTRG.19570 Avicennia marina HOM05D007452 ORTHO05D009375 3.2e-47 191.8 128 79.7
vmacro06236 Vaccinium macrocarpon HOM05D007452 ORTHO05D009375 8.7e-45 183.7 130 75.4
unitig_899.g15033 Utricularia gibba HOM05D007452 ORTHO05D009375 1.5e-44 183.0 130 76.2
Nitab4.5_0002165g0070 Nicotiana tabacum HOM05D007452 ORTHO05D009375 1.1e-42 176.8 130 73.8
Nitab4.5_0003331g0020 Nicotiana tabacum HOM05D007452 ORTHO05D009375 1.8e-42 176.0 129 73.6
Oeu002255.1 Olea europaea HOM05D007452 ORTHO05D009375 2.4e-42 175.6 132 74.2
Nitab4.5_0000066g0140 Nicotiana tabacum HOM05D007452 ORTHO05D009375 4.1e-42 174.9 130 72.3
PGSC0003DMG400023982 Solanum tuberosum HOM05D007452 ORTHO05D009375 6.9e-42 174.1 130 72.3
Cc06_g10100 Coffea canephora HOM05D007452 ORTHO05D009375 2.6e-41 172.2 130 70.0
RcHm_v2.0_Chr2g0091331 Rosa chinensis HOM05D007452 ORTHO05D009375 4.5e-41 171.4 122 72.1
Solyc11g006870.1 Solanum lycopersicum HOM05D007452 ORTHO05D009375 4.5e-41 171.4 130 70.0
Sopen11g002770 Solanum pennellii HOM05D007452 ORTHO05D009375 4.5e-41 171.4 130 70.0
CAN.G645.18 Capsicum annuum HOM05D007452 ORTHO05D009375 1.3e-40 169.9 131 71.0
MELO3C024705.2 Cucumis melo HOM05D007452 ORTHO05D009375 2.9e-40 168.7 124 72.6
COL.COLO4_34802 Corchorus olitorius HOM05D007452 ORTHO05D009375 6.5e-40 167.5 132 69.7
PGR102G0901 Punica granatum HOM05D007452 ORTHO05D009375 6.5e-40 167.5 137 69.3
FvH4_1g05720 Fragaria vesca HOM05D007452 ORTHO05D009375 1.1e-39 166.8 130 69.2
QL02p043240 Quercus lobata HOM05D007452 ORTHO05D009375 1.1e-39 166.8 123 72.4
QL02p044487 Quercus lobata HOM05D007452 ORTHO05D009375 1.1e-39 166.8 123 72.4
FAN28G0080 Fragaria x ananassa HOM05D007452 ORTHO05D009375 1.4e-39 166.4 130 68.5
FAN26G0145 Fragaria x ananassa HOM05D007452 ORTHO05D009375 1.9e-39 166.0 130 68.5
FAN26G2311 Fragaria x ananassa HOM05D007452 ORTHO05D009375 2.5e-39 165.6 130 67.7
Phvul.002G311100 Phaseolus vulgaris HOM05D007452 ORTHO05D009375 2.5e-39 165.6 130 66.9
Gohir.D06G063500 Gossypium hirsutum HOM05D007452 ORTHO05D009375 4.2e-39 164.9 132 67.4
FAN19G0597 Fragaria x ananassa HOM05D007452 ORTHO05D009375 5.5e-39 164.5 130 68.5
Glyma.08G035800 Glycine max HOM05D007452 ORTHO05D009375 7.2e-39 164.1 130 66.9
MD02G1057900 Malus domestica HOM05D007452 ORTHO05D009375 7.2e-39 164.1 134 64.9
MD15G1192300 Malus domestica HOM05D007452 ORTHO05D009375 7.2e-39 164.1 131 65.6
Rhsim03G0239200 Rhododendron simsii HOM05D007452 ORTHO05D009375 9.4e-39 163.7 116 74.1
Sed0023851 Sechium edule HOM05D007452 ORTHO05D009375 9.4e-39 163.7 123 70.7
Haze_25788 Corylus avellana HOM05D007452 ORTHO05D009375 1.2e-38 163.3 134 66.4
Prupe.7G224900 Prunus persica HOM05D007452 ORTHO05D009375 1.6e-38 162.9 134 65.7
PSO210G5570 Papaver somniferum HOM05D007452 ORTHO05D009375 3.6e-38 161.8 135 66.7
TWI34G0936 Tripterygium wilfordii HOM05D007452 ORTHO05D009375 3.6e-38 161.8 133 66.2
Thecc.09G105200 Theobroma cacao HOM05D007452 ORTHO05D009375 4.6e-38 161.4 131 67.9
HanXRQChr10g0318511 Helianthus annuus HOM05D007452 ORTHO05D009375 7.9e-38 160.6 132 66.7
TAR636G3481 Trochodendron aralioides HOM05D007452 ORTHO05D009375 7.9e-38 160.6 134 65.7
Lsat_1_v5_gn_5_147400 Lactuca sativa HOM05D007452 ORTHO05D009375 3.0e-37 158.7 132 66.7
Ca_17318_v3 Cicer arietinum L. HOM05D007452 ORTHO05D009375 5.1e-37 157.9 133 60.2
DCAR_012055 Daucus carota HOM05D007452 ORTHO05D009375 5.1e-37 157.9 124 64.5
Dinv41642 Davidia involucrata HOM05D007452 ORTHO05D009375 5.1e-37 157.9 122 68.0
Atru.chr7.1416 Acer truncatum HOM05D007452 ORTHO05D009375 1.5e-36 156.4 139 62.6
Medtr8g102920 Medicago truncatula HOM05D007452 ORTHO05D009375 2.0e-36 156.0 131 60.3
GSVIVG01015344001 Vitis vinifera HOM05D007452 ORTHO05D009375 2.0e-36 156.0 134 64.9
Ciclev10009852m.g Citrus clementina HOM05D007452 ORTHO05D009375 3.3e-36 155.2 132 64.4
ClCG06G008870 Citrullus lanatus HOM05D007452 ORTHO05D009375 4.3e-36 154.8 106 74.5
Nn2g11650 Nelumbo nucifera HOM05D007452 ORTHO05D009375 5.7e-36 154.5 134 62.7
Psat7g014560 Pisum sativum HOM05D007452 ORTHO05D009375 5.7e-36 154.5 133 57.9
Duzib187G0798 Durio zibethinus HOM05D007452 ORTHO05D009375 1.7e-35 152.9 118 70.3
Gorai.010G074100 Gossypium raimondii HOM05D007452 ORTHO05D009375 1.7e-35 152.9 120 67.5
HPP92_008140 Vanilla planifolia HOM05D007452 ORTHO05D009375 1.7e-35 152.9 128 62.5
Aqoxy7G01521 Aquilegia oxysepala HOM05D007452 ORTHO05D009375 2.8e-35 152.1 130 64.6
CARHR193330 Cardamine hirsuta HOM05D007452 ORTHO05D009375 2.8e-35 152.1 134 61.9
Peaxi162Scf00539g00066 Petunia axillaris HOM05D007452 ORTHO05D009375 2.8e-35 152.1 111 70.3
Eucgr.C01281 Eucalyptus grandis HOM05D007452 ORTHO05D009375 8.2e-35 150.6 121 69.4
Thhalv10014912m.g Eutrema salsugineum HOM05D007452 ORTHO05D009375 8.2e-35 150.6 134 61.9
Cfa003221 Carpinus fangiana HOM05D007452 ORTHO05D009375 1.4e-34 149.8 120 67.5
Ah.09g230860 Amaranthus hybridus HOM05D007452 ORTHO05D009375 1.8e-34 149.4 139 62.6
AT5G19570 Arabidopsis thaliana HOM05D007452 ORTHO05D009375 1.8e-34 149.4 135 60.0
Os05g0188300 Oryza sativa ssp. japonica HOM05D007452 ORTHO05D009375 2.4e-34 149.1 128 61.7
AUR62021449 Chenopodium quinoa HOM05D007452 ORTHO05D009375 3.1e-34 148.7 136 58.1
Carub.0006s1792 Capsella rubella HOM05D007452 ORTHO05D009375 4.1e-34 148.3 136 58.8
Gohir.A06G065000 Gossypium hirsutum HOM05D007452 ORTHO05D009375 9.1e-34 147.1 120 65.0
Potri.018G084400 Populus trichocarpa HOM05D007452 ORTHO05D009375 9.1e-34 147.1 136 59.6
BcaC03g13689 Brassica carinata HOM05D007452 ORTHO05D009375 1.5e-33 146.4 133 58.6
BNapus_Darmor_BZH_scaffold_38p02290 Brassica napus HOM05D007452 ORTHO05D009375 1.5e-33 146.4 133 58.6
Zm00001eb089090 Zea mays HOM05D007452 ORTHO05D009375 1.5e-33 146.4 122 63.9
Sabra18G0072700 Salix brachista HOM05D007452 ORTHO05D009375 2.0e-33 146.0 134 60.4
AL6G31080 Arabidopsis lyrata HOM05D007452 ORTHO05D009375 3.4e-33 145.2 136 58.1
THA.LOC104799068 Tarenaya hassleriana HOM05D007452 ORTHO05D009375 4.5e-33 144.8 132 61.4
THA.LOC104808980 Tarenaya hassleriana HOM05D007452 ORTHO05D009375 4.5e-33 144.8 132 61.4
BraA02t05518Z Brassica rapa HOM05D007452 ORTHO05D009375 7.7e-33 144.1 137 56.2
Glyma.05G228800 Glycine max HOM05D007452 ORTHO05D009375 7.7e-33 144.1 117 65.0
A02p05660 Brassica napus HOM05D007452 ORTHO05D009375 1.3e-32 143.3 138 55.1
Lalb_Chr05g0223071 Lupinus albus HOM05D007452 ORTHO05D009375 6.5e-32 141.0 122 59.0
Aa31LG5G13720 Aethionema arabicum HOM05D007452 ORTHO05D009375 8.5e-32 140.6 117 63.2
BcaB05g23392 Brassica carinata HOM05D007452 ORTHO05D009375 1.1e-31 140.2 137 53.3
CiPaw.04G161200 Carya illinoinensis HOM05D007452 ORTHO05D009375 1.9e-31 139.4 127 60.6
ATR0315G055 Amborella trichopoda HOM05D007452 ORTHO05D009375 3.2e-31 138.7 127 58.3
Sopen08g027980 Solanum pennellii HOM05D007452 ORTHO05D009375 3.2e-31 138.7 127 63.0
MBI04_g14927_MAGBIO Magnolia biondii HOM05D007452 ORTHO05D009375 5.5e-31 137.9 115 60.9
CDE02G1573 Ceratophyllum demersum HOM05D007452 ORTHO05D009375 2.1e-30 136.0 131 58.8
Sc08g0007740 Simmondsia chinensis HOM05D007452 ORTHO05D009375 3.6e-30 135.2 135 58.5
CSS0004194 Camellia sinensis var. sinensis HOM05D007452 ORTHO05D009375 4.7e-30 134.8 124 60.5
BolC2t06971H Brassica oleracea HOM05D007452 ORTHO05D009375 1.0e-29 133.7 127 57.5
Manes.03G024500 Manihot esculenta HOM05D007452 ORTHO05D009375 1.4e-29 133.3 121 58.7
CsaV3_1G020810 Cucumis sativus L. HOM05D007452 ORTHO05D009375 3.9e-29 131.7 96 71.9
HanXRQChr03g0087651 Helianthus annuus HOM05D007452 ORTHO05D009375 4.4e-28 128.3 118 61.0
SEGI_20837 Sequoiadendron giganteum HOM05D007452 ORTHO05D009375 1.2e-25 120.2 134 50.7
EL10Ac8g18425 Beta vulgaris HOM05D007452 ORTHO05D009375 1.5e-25 119.8 110 58.2
CiPaw.08G085300 Carya illinoinensis HOM05D007452 ORTHO05D009375 1.9e-23 112.8 119 57.1
Cfa001992 Carpinus fangiana HOM05D007452 ORTHO05D009375 5.2e-21 104.8 95 58.9
HanXRQChr02g0047631 Helianthus annuus HOM05D007452 ORTHO05D009375 6.7e-21 104.4 110 56.4
Pp3c5_13600 Physcomitrium patens HOM05D007452 ORTHO05D009375 6.7e-21 104.4 128 45.3
SMO119G0523 Selaginella moellendorffii HOM05D007452 ORTHO05D009375 8.2e-19 97.4 124 47.6
Mapoly0005s0019 Marchantia polymorpha HOM05D007452 ORTHO05D009375 7.7e-17 90.9 130 39.2
AagrBONN_evm.TU.Sc2ySwM_117.3226 Anthoceros agrestis HOM05D007452 ORTHO05D009375 2.3e-13 79.3 127 42.5
MBI12_g37480_MAGBIO Magnolia biondii HOM05D007452 ORTHO05D009375 1.3e-08 63.5 51 66.7
MBI05_g24448_MAGBIO Magnolia biondii HOM05D007452 ORTHO05D009375 8.0e-06 54.3 70 48.6


User provided reference genes

Program Settings