Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold10G05147 Striga asiatica HOM05D007504 ORTHO05D007629 2.0e-196 689.1 406 100.0
SalBow6G5451 Salvia bowleyana HOM05D007504 ORTHO05D007629 1.9e-21 107.8 398 31.2
Lalb_Chr21g0311381 Lupinus albus HOM05D007504 ORTHO05D007629 2.8e-20 104.0 448 26.6
Manes.08G105000 Manihot esculenta HOM05D007504 ORTHO05D007629 3.6e-20 103.6 429 28.9
CSS0023929 Camellia sinensis var. sinensis HOM05D007504 ORTHO05D007629 6.2e-20 102.8 510 25.9
Eucgr.H01377 Eucalyptus grandis HOM05D007504 ORTHO05D007629 3.1e-19 100.5 457 28.2
PGR031G1611 Punica granatum HOM05D007504 ORTHO05D007629 3.1e-19 100.5 462 26.4
Sabra19G0056400 Salix brachista HOM05D007504 ORTHO05D007629 1.5e-18 98.2 426 27.9
Hund21875 Selenicereus undatus HOM05D007504 ORTHO05D007629 2.0e-18 97.8 479 25.9
Migut.F01885 Erythranthe guttata HOM05D007504 ORTHO05D007629 5.8e-18 96.3 182 36.8
Nitab4.5_0000276g0060 Nicotiana tabacum HOM05D007504 ORTHO05D007629 2.9e-17 94.0 557 24.1
TWI14G0943 Tripterygium wilfordii HOM05D007504 ORTHO05D007629 2.9e-17 94.0 478 25.7
CsaV3_1G037800 Cucumis sativus L. HOM05D007504 ORTHO05D007629 8.4e-17 92.4 420 25.7
Nitab4.5_0000456g0090 Nicotiana tabacum HOM05D007504 ORTHO05D007629 1.4e-16 91.7 553 24.6
THA.LOC104823805 Tarenaya hassleriana HOM05D009566 ORTHO05D007629 1.9e-16 91.3 385 28.1
Cfa006286 Carpinus fangiana HOM05D007504 ORTHO05D007629 2.4e-16 90.9 445 25.8
Lsat_1_v5_gn_8_3001 Lactuca sativa HOM05D007504 ORTHO05D007629 4.2e-16 90.1 547 24.7
ClCG01G008930 Citrullus lanatus HOM05D007504 ORTHO05D007629 9.3e-16 89.0 435 25.5
Potri.019G052300 Populus trichocarpa HOM05D007504 ORTHO05D007629 2.1e-15 87.8 470 26.4
CiPaw.07G074500 Carya illinoinensis HOM05D007504 ORTHO05D007629 2.7e-15 87.4 466 25.5
GSVIVG01019149001 Vitis vinifera HOM05D007504 ORTHO05D007629 1.0e-14 85.5 103 46.6
Rhsim09G0131100 Rhododendron simsii HOM05D007504 ORTHO05D007629 1.8e-14 84.7 551 26.0
Duzib177G0136 Durio zibethinus HOM05D007504 ORTHO05D007629 2.3e-14 84.3 84 52.4
Thecc.05G204700 Theobroma cacao HOM05D007504 ORTHO05D007629 2.3e-14 84.3 85 52.9
TWI59G0549 Tripterygium wilfordii HOM05D007504 ORTHO05D007629 2.3e-14 84.3 476 25.8
FvH4_6g00830 Fragaria vesca HOM05D007504 ORTHO05D007629 6.7e-14 82.8 145 38.6
QL01p050471 Quercus lobata HOM05D007504 ORTHO05D007629 6.7e-14 82.8 70 55.7
EL10Ac4g09412 Beta vulgaris HOM05D007504 ORTHO05D007629 8.7e-14 82.4 177 35.0
FAN09G1848 Fragaria x ananassa HOM05D007504 ORTHO05D007629 8.7e-14 82.4 488 24.2
Gohir.A13G089900 Gossypium hirsutum HOM05D007504 ORTHO05D007629 8.7e-14 82.4 75 54.7
FAN14G3522 Fragaria x ananassa HOM05D007504 ORTHO05D007629 1.1e-13 82.0 145 38.6
Peaxi162Scf00994g00026 Petunia axillaris HOM05D007504 ORTHO05D007629 1.1e-13 82.0 68 57.4
Sed0012429 Sechium edule HOM05D007504 ORTHO05D007629 1.1e-13 82.0 396 26.8
MBI07_g00623_MAGBIO Magnolia biondii HOM05D007504 ORTHO05D007629 1.5e-13 81.6 114 42.1
Ca_09972_v3 Cicer arietinum L. HOM05D007504 ORTHO05D007629 1.9e-13 81.3 160 34.4
Lj7A601T114 Lonicera japonica HOM05D007504 ORTHO05D007629 1.9e-13 81.3 147 39.5
Oeu008540.1 Olea europaea HOM05D007504 ORTHO05D007629 1.9e-13 81.3 133 38.3
Cc09_g03320 Coffea canephora HOM05D007504 ORTHO05D007629 3.3e-13 80.5 507 24.1
MELO3C021807.2 Cucumis melo HOM05D007504 ORTHO05D007629 4.3e-13 80.1 431 25.1
Gohir.D13G093400 Gossypium hirsutum HOM05D007504 ORTHO05D007629 4.3e-13 80.1 172 36.6
Gorai.002G147900 Gossypium raimondii HOM05D007504 ORTHO05D007629 5.6e-13 79.7 172 36.6
Cpa.g.sc123.14 Carica papaya HOM05D007504 ORTHO05D007629 7.4e-13 79.3 70 55.7
DCAR_029902 Daucus carota HOM05D007504 ORTHO05D007629 7.4e-13 79.3 116 40.5
RcHm_v2.0_Chr3g0448301 Rosa chinensis HOM05D007504 ORTHO05D007629 7.4e-13 79.3 465 25.8
VMungo0720G1881 Vigna mungo HOM05D007504 ORTHO05D007629 7.4e-13 79.3 510 23.1
arahy.Tifrunner.gnm1.ann1.V3BTAU Arachis hypogaea HOM05D007504 ORTHO05D007629 1.6e-12 78.2 107 39.3
AUR62006721 Chenopodium quinoa HOM05D007504 ORTHO05D007629 1.6e-12 78.2 88 47.7
COL.COLO4_06844 Corchorus olitorius HOM05D007504 ORTHO05D007629 1.6e-12 78.2 179 33.0
arahy.Tifrunner.gnm1.ann1.DN7JE5 Arachis hypogaea HOM05D007504 ORTHO05D007629 2.8e-12 77.4 178 32.6
Sc09g0001640 Simmondsia chinensis HOM05D007504 ORTHO05D007629 2.8e-12 77.4 491 22.6
Psat6g051960 Pisum sativum HOM05D007504 ORTHO05D007629 6.2e-12 76.3 182 32.4
Aqoxy2G03947 Aquilegia oxysepala HOM05D007504 ORTHO05D007629 1.1e-11 75.5 527 23.9
ATR0609G092 Amborella trichopoda HOM05D007504 ORTHO05D007629 1.4e-11 75.1 74 54.1
Atru.chr12.1547 Acer truncatum HOM05D007504 ORTHO05D007629 1.8e-11 74.7 504 24.0
Ah.06g195770 Amaranthus hybridus HOM05D007504 ORTHO05D007629 1.8e-11 74.7 180 30.0
CDE05G0344 Ceratophyllum demersum HOM05D007504 ORTHO05D007629 1.8e-11 74.7 414 25.4
HanXRQChr05g0156881 Helianthus annuus HOM05D007504 ORTHO05D007629 2.4e-11 74.3 72 47.2
PGSC0003DMG400016931 Solanum tuberosum HOM05D007504 ORTHO05D007629 2.4e-11 74.3 551 24.0
CAN.G29.22 Capsicum annuum HOM05D007504 ORTHO05D007629 3.1e-11 73.9 566 24.6
TAR636G3585 Trochodendron aralioides HOM05D007504 ORTHO05D007629 3.1e-11 73.9 68 51.5
Glyma.20G219900 Glycine max HOM05D007504 ORTHO05D007629 4.0e-11 73.6 555 25.2
Solyc04g051280.4 Solanum lycopersicum HOM05D007504 ORTHO05D007629 5.3e-11 73.2 563 24.7
CSS0029071 Camellia sinensis var. sinensis HOM05D007504 ORTHO05D007629 9.0e-11 72.4 73 49.3
Dinv02913 Davidia involucrata HOM05D007504 ORTHO05D007629 9.0e-11 72.4 587 22.8
ECA233G2160 Erigeron canadensis HOM05D007504 ORTHO05D007629 9.0e-11 72.4 134 35.1
Medtr1g078420 Medicago truncatula HOM05D007504 ORTHO05D007629 1.5e-10 71.6 158 31.0
CDE05G2205 Ceratophyllum demersum HOM05D007504 ORTHO05D007629 2.6e-10 70.9 410 22.9
MD12G1258000 Malus domestica HOM05D007504 ORTHO05D007629 2.6e-10 70.9 561 22.3
Actinidia38910 Actinidia chinensis HOM05D007504 ORTHO05D007629 3.4e-10 70.5 581 25.1
BcaB05g24082 Brassica carinata HOM05D009566 ORTHO05D007629 3.4e-10 70.5 382 24.3
Phvul.010G077946 Phaseolus vulgaris HOM05D007504 ORTHO05D007629 3.4e-10 70.5 71 46.5
Sopen04g022690 Solanum pennellii HOM05D007504 ORTHO05D007629 3.4e-10 70.5 75 56.0
C04p43550 Brassica napus HOM05D009566 ORTHO05D007629 4.5e-10 70.1 154 33.8
Carub.0007s3177 Capsella rubella HOM05D009566 ORTHO05D007629 4.5e-10 70.1 102 40.2
AUR62000366 Chenopodium quinoa HOM05D007504 ORTHO05D007629 4.5e-10 70.1 159 34.0
BraA02t06358Z Brassica rapa HOM05D009566 ORTHO05D007629 5.8e-10 69.7 388 23.5
Ciclev10011923m.g Citrus clementina HOM05D007504 ORTHO05D007629 1.0e-09 68.9 161 34.2
PSO017G3378 Papaver somniferum HOM05D007504 ORTHO05D007629 1.0e-09 68.9 75 46.7
BcaC03g14675 Brassica carinata HOM05D009566 ORTHO05D007629 1.7e-09 68.2 390 24.9
A04p10080 Brassica napus HOM05D009566 ORTHO05D007629 1.7e-09 68.2 163 33.7
BraA04t16670Z Brassica rapa HOM05D009566 ORTHO05D007629 1.7e-09 68.2 166 31.9
Glyma.10G170100 Glycine max HOM05D007504 ORTHO05D007629 1.7e-09 68.2 128 35.9
BolC4t25935H Brassica oleracea HOM05D009566 ORTHO05D007629 2.9e-09 67.4 163 33.1
Haze_04521 Corylus avellana HOM05D007504 ORTHO05D007629 2.9e-09 67.4 499 22.8
Thhalv10005424m.g Eutrema salsugineum HOM05D009566 ORTHO05D007629 2.9e-09 67.4 396 26.5
Aa31LG2G2280 Aethionema arabicum HOM05D009566 ORTHO05D007629 3.8e-09 67.0 120 35.8
TPR.G14656 Trifolium pratense HOM05D007504 ORTHO05D007629 4.9e-09 66.6 281 25.3
CSS0043883 Camellia sinensis var. sinensis HOM05D007504 ORTHO05D007629 6.5e-09 66.2 90 46.7
Lj5g0006161 Lotus japonicus HOM05D007504 ORTHO05D007629 1.1e-08 65.5 596 22.7
Oeu014606.1 Olea europaea HOM05D007504 ORTHO05D007629 1.1e-08 65.5 93 43.0
CARHR216660 Cardamine hirsuta HOM05D009566 ORTHO05D007629 1.4e-08 65.1 391 23.3
BolC2t08254H Brassica oleracea HOM05D009566 ORTHO05D007629 1.9e-08 64.7 389 24.7
AL2G19730 Arabidopsis lyrata HOM05D009566 ORTHO05D007629 2.5e-08 64.3 403 25.3
SEGI_35581 Sequoiadendron giganteum HOM05D007504 ORTHO05D007629 2.5e-08 64.3 65 47.7
AT1G65090 Arabidopsis thaliana HOM05D009566 ORTHO05D007629 3.2e-08 63.9 402 26.6
Sp7g06100 Schrenkiella parvula HOM05D009566 ORTHO05D007629 4.2e-08 63.5 385 23.4
Nn1g08319 Nelumbo nucifera HOM05D007504 ORTHO05D007629 9.3e-08 62.4 46 63.0
TAR636G2263 Trochodendron aralioides HOM05D007504 ORTHO05D007629 9.3e-08 62.4 86 43.0
QL01p050434 Quercus lobata HOM05D007504 ORTHO05D007629 1.2e-07 62.0 226 27.4
BcaB06g27006 Brassica carinata HOM05D009566 ORTHO05D007629 1.6e-07 61.6 389 26.0
BcaC02g09508 Brassica carinata HOM05D009566 ORTHO05D007629 2.7e-07 60.8 395 24.8
MD04G1241000 Malus domestica HOM05D007504 ORTHO05D007629 2.7e-07 60.8 188 27.7
BcaB02g08045 Brassica carinata HOM05D009566 ORTHO05D007629 3.5e-07 60.5 160 30.0
AT5G36100 Arabidopsis thaliana HOM05D009566 ORTHO05D007629 4.6e-07 60.1 379 24.0
A02p13020 Brassica napus HOM05D009566 ORTHO05D007629 6.0e-07 59.7 383 24.5
HPP92_009958 Vanilla planifolia HOM05D007504 ORTHO05D007629 6.0e-07 59.7 472 22.7
C02p21140 Brassica napus HOM05D009566 ORTHO05D007629 7.9e-07 59.3 383 24.5
Prupe.6G358500 Prunus persica HOM05D007504 ORTHO05D007629 2.3e-06 57.8 59 52.5
Os12g0506700 Oryza sativa ssp. japonica HOM05D007504 ORTHO05D007629 5.1e-06 56.6 153 28.1
SHI33673 Sapria himalayana HOM05D007504 ORTHO05D000001 8.7e-06 55.8 56 50.0


User provided reference genes

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