Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold10G05141 Striga asiatica HOM05D005159 ORTHO05D006237 4.7e-176 621.3 365 100.0
SalBow1G7987 Salvia bowleyana HOM05D005159 ORTHO05D006237 4.3e-81 305.8 307 59.3
MSTRG.15424 Avicennia marina HOM05D005159 ORTHO05D006237 8.2e-80 301.6 372 53.5
Dinv33896 Davidia involucrata HOM05D005159 ORTHO05D006237 3.2e-68 263.1 162 82.1
Migut.K00872 Erythranthe guttata HOM05D005159 ORTHO05D006237 2.1e-67 260.4 174 78.7
Ciclev10012260m.g Citrus clementina HOM05D005159 ORTHO05D006237 6.7e-66 255.4 209 67.5
Peaxi162Scf00479g00439 Petunia axillaris HOM05D005159 ORTHO05D006237 1.3e-64 251.1 256 57.4
GSVIVG01036491001 Vitis vinifera HOM05D005159 ORTHO05D006237 3.7e-64 249.6 203 65.5
PGSC0003DMG400018775 Solanum tuberosum HOM05D005159 ORTHO05D006237 3.1e-63 246.5 165 73.9
Nitab4.5_0001982g0030 Nicotiana tabacum HOM05D005159 ORTHO05D006237 9.1e-63 245.0 369 45.8
Cpa.g.sc70.15 Carica papaya HOM05D005159 ORTHO05D006237 5.9e-62 242.3 253 55.7
Actinidia18107 Actinidia chinensis HOM05D005159 ORTHO05D006237 7.7e-62 241.9 182 71.4
unitig_61.g26382 Utricularia gibba HOM05D005159 ORTHO05D006237 2.9e-61 240.0 144 83.3
Oeu062202.1 Olea europaea HOM05D005159 ORTHO05D006237 3.8e-61 239.6 145 84.1
THA.LOC104805544 Tarenaya hassleriana HOM05D005159 ORTHO05D006237 1.5e-60 237.7 203 65.5
Sopen03g009860 Solanum pennellii HOM05D005159 ORTHO05D006237 5.5e-60 235.7 249 55.8
CDE01G0131 Ceratophyllum demersum HOM05D005159 ORTHO05D006237 7.2e-60 235.3 241 55.6
Cc08_g12050 Coffea canephora HOM05D005159 ORTHO05D006237 7.2e-60 235.3 162 74.1
Eucgr.I02096 Eucalyptus grandis HOM05D005159 ORTHO05D006237 9.4e-60 235.0 188 64.4
MBI15_g18197_MAGBIO Magnolia biondii HOM05D005159 ORTHO05D006237 1.6e-59 234.2 240 57.1
CsaV3_5G013180 Cucumis sativus L. HOM05D005159 ORTHO05D006237 4.7e-59 232.6 180 67.2
MELO3C020033.2 Cucumis melo HOM05D005159 ORTHO05D006237 6.1e-59 232.3 180 66.7
Prupe.3G244000 Prunus persica HOM05D005159 ORTHO05D006237 6.1e-59 232.3 259 54.8
Solyc03g046350.3 Solanum lycopersicum HOM05D005159 ORTHO05D006237 1.0e-58 231.5 249 55.0
PGSC0003DMG400010100 Solanum tuberosum HOM05D005159 ORTHO05D006237 1.4e-58 231.1 370 43.5
Solyc02g089600.3 Solanum lycopersicum HOM05D005159 ORTHO05D006237 4.0e-58 229.6 372 44.1
ClCG11G001130 Citrullus lanatus HOM05D005159 ORTHO05D006237 6.8e-58 228.8 194 63.9
Nn1g09575 Nelumbo nucifera HOM05D005159 ORTHO05D006237 1.2e-57 228.0 249 55.0
Duzib211G0079 Durio zibethinus HOM05D005159 ORTHO05D006237 1.5e-57 227.6 186 66.1
Lju237A1T66 Lonicera japonica HOM05D005159 ORTHO05D006237 2.6e-57 226.9 268 53.7
MBI15_g38433_MAGBIO Magnolia biondii HOM05D005159 ORTHO05D006237 3.4e-57 226.5 193 63.7
Sed0002827 Sechium edule HOM05D005159 ORTHO05D006237 3.4e-57 226.5 180 67.2
Sed0024356 Sechium edule HOM05D005159 ORTHO05D006237 4.4e-57 226.1 180 65.6
Peaxi162Scf01056g00019 Petunia axillaris HOM05D005159 ORTHO05D006237 5.7e-57 225.7 372 43.8
Nitab4.5_0006224g0050 Nicotiana tabacum HOM05D005159 ORTHO05D006237 9.8e-57 224.9 366 44.0
CAN.G497.25 Capsicum annuum HOM05D005159 ORTHO05D006237 1.7e-56 224.2 249 53.8
TWI32G0838 Tripterygium wilfordii HOM05D005159 ORTHO05D006237 1.7e-56 224.2 270 52.6
MD09G1079700 Malus domestica HOM05D005159 ORTHO05D006237 2.2e-56 223.8 153 74.5
arahy.Tifrunner.gnm1.ann1.MEN3PN Arachis hypogaea HOM05D005159 ORTHO05D006237 8.3e-56 221.9 220 59.5
Phvul.008G006700 Phaseolus vulgaris HOM05D005159 ORTHO05D006237 8.3e-56 221.9 249 53.8
Potri.004G106900 Populus trichocarpa HOM05D005159 ORTHO05D006237 8.3e-56 221.9 214 57.5
Hund27686 Selenicereus undatus HOM05D005159 ORTHO05D006237 1.4e-55 221.1 180 65.6
Hund27687 Selenicereus undatus HOM05D005159 ORTHO05D006237 1.4e-55 221.1 180 65.6
CANSAT21G0179 Cannabis sativa HOM05D005159 ORTHO05D006237 1.8e-55 220.7 376 42.8
Potri.017G108700 Populus trichocarpa HOM05D005159 ORTHO05D006237 2.4e-55 220.3 295 47.1
Sabra04G0075100 Salix brachista HOM05D005159 ORTHO05D006237 2.4e-55 220.3 244 52.0
Thecc.04G145900 Theobroma cacao HOM05D005159 ORTHO05D006237 2.4e-55 220.3 160 71.2
PGR004G1892 Punica granatum HOM05D005159 ORTHO05D006237 5.4e-55 219.2 184 60.9
Sc10g0001500 Simmondsia chinensis HOM05D005159 ORTHO05D006237 5.4e-55 219.2 243 53.1
MD17G1070200 Malus domestica HOM05D005159 ORTHO05D006237 9.1e-55 218.4 150 74.0
PSO017G6426 Papaver somniferum HOM05D005159 ORTHO05D006237 9.1e-55 218.4 150 70.7
DCAR_026285 Daucus carota HOM05D005159 ORTHO05D006237 2.0e-54 217.2 349 44.4
CiPaw.03G007500 Carya illinoinensis HOM05D005159 ORTHO05D006237 4.5e-54 216.1 290 46.2
Glyma.07G204700 Glycine max HOM05D005159 ORTHO05D006237 4.5e-54 216.1 248 55.2
Ca_13657_v3 Cicer arietinum L. HOM05D005159 ORTHO05D006237 1.7e-53 214.2 235 55.3
Medtr4g051625 Medicago truncatula HOM05D005159 ORTHO05D006237 1.7e-53 214.2 220 55.5
BcaC02g09665 Brassica carinata HOM05D005159 ORTHO05D006237 2.9e-53 213.4 150 71.3
C04p45340 Brassica napus HOM05D005159 ORTHO05D006237 2.9e-53 213.4 150 71.3
BolC4t26116H Brassica oleracea HOM05D005159 ORTHO05D006237 2.9e-53 213.4 150 71.3
BraA04t16828Z Brassica rapa HOM05D005159 ORTHO05D006237 2.9e-53 213.4 150 71.3
Aa31LG9G16930 Aethionema arabicum HOM05D005159 ORTHO05D006237 3.8e-53 213.0 246 53.7
A04p11610 Brassica napus HOM05D005159 ORTHO05D006237 8.5e-53 211.8 151 70.2
Gohir.A13G118100 Gossypium hirsutum HOM05D005159 ORTHO05D006237 1.1e-52 211.5 240 52.5
EL10Ac7g16490 Beta vulgaris HOM05D005159 ORTHO05D006237 1.5e-52 211.1 243 52.3
CDE02G0002 Ceratophyllum demersum HOM05D005159 ORTHO05D006237 1.9e-52 210.7 134 75.4
Actinidia36292 Actinidia chinensis HOM05D005159 ORTHO05D006237 3.2e-52 209.9 132 79.5
Ca_26327_v3 Cicer arietinum L. HOM05D005159 ORTHO05D006237 3.2e-52 209.9 217 54.4
Manes.01G106500 Manihot esculenta HOM05D005159 ORTHO05D006237 3.2e-52 209.9 244 52.5
TPR.G37714 Trifolium pratense HOM05D005159 ORTHO05D006237 9.4e-52 208.4 234 53.4
BcaB06g27239 Brassica carinata HOM05D005159 ORTHO05D006237 1.2e-51 208.0 255 49.4
Gohir.D13G121900 Gossypium hirsutum HOM05D005159 ORTHO05D006237 2.1e-51 207.2 240 51.7
Gorai.013G136600 Gossypium raimondii HOM05D005159 ORTHO05D006237 2.1e-51 207.2 240 51.7
PSO478G0642 Papaver somniferum HOM05D005159 ORTHO05D006237 2.7e-51 206.8 156 65.4
Sp7g03200 Schrenkiella parvula HOM05D005159 ORTHO05D006237 4.7e-51 206.1 242 51.7
AL7G51700 Arabidopsis lyrata HOM05D005159 ORTHO05D006237 1.8e-50 204.1 184 59.2
AUR62016605 Chenopodium quinoa HOM05D005159 ORTHO05D006237 1.8e-50 204.1 236 52.5
HanXRQChr03g0078031 Helianthus annuus HOM05D005159 ORTHO05D006237 1.8e-50 204.1 379 41.7
HPP92_015315 Vanilla planifolia HOM05D005159 ORTHO05D006237 2.3e-50 203.8 202 57.9
Glyma.13G171200 Glycine max HOM05D005159 ORTHO05D006237 3.0e-50 203.4 134 76.9
Carub.0007s3714 Capsella rubella HOM05D005159 ORTHO05D006237 1.2e-49 201.4 267 49.1
arahy.Tifrunner.gnm1.ann1.VE7QKQ Arachis hypogaea HOM05D005159 ORTHO05D006237 1.5e-49 201.1 254 52.8
CSS0013880 Camellia sinensis var. sinensis HOM05D005159 ORTHO05D006237 2.6e-49 200.3 155 65.2
ECA240G3626 Erigeron canadensis HOM05D005159 ORTHO05D006237 3.4e-49 199.9 251 49.8
Atru.chr11.1725 Acer truncatum HOM05D005159 ORTHO05D006237 4.4e-49 199.5 285 44.9
Aqoxy3G00614 Aquilegia oxysepala HOM05D005159 ORTHO05D006237 5.7e-49 199.1 185 59.5
AT5G38720 Arabidopsis thaliana HOM05D005159 ORTHO05D006237 5.7e-49 199.1 240 50.0
Medtr8g085800 Medicago truncatula HOM05D005159 ORTHO05D006237 7.5e-49 198.7 140 72.1
Thhalv10028147m.g Eutrema salsugineum HOM05D005159 ORTHO05D006237 9.8e-49 198.4 257 48.6
QL02p054338 Quercus lobata HOM05D005159 ORTHO05D006237 1.3e-48 198.0 250 47.6
Psat6g166480 Pisum sativum HOM05D005159 ORTHO05D006237 1.7e-48 197.6 167 62.9
CSS0007706 Camellia sinensis var. sinensis HOM05D005159 ORTHO05D006237 2.2e-48 197.2 157 63.7
CSS0044288 Camellia sinensis var. sinensis HOM05D005159 ORTHO05D006237 2.2e-48 197.2 157 63.7
C06p18340 Brassica napus HOM05D005159 ORTHO05D006237 6.3e-48 195.7 211 54.5
BolC6t37046H Brassica oleracea HOM05D005159 ORTHO05D006237 6.3e-48 195.7 211 54.5
Ah.08g217340 Amaranthus hybridus HOM05D005159 ORTHO05D006237 8.3e-48 195.3 251 51.0
Medtr1g090650 Medicago truncatula HOM05D005159 ORTHO05D006237 1.1e-47 194.9 188 58.0
TAR371G0967 Trochodendron aralioides HOM05D005159 ORTHO05D006237 1.8e-47 194.1 239 50.2
Ah.15g094970 Amaranthus hybridus HOM05D005159 ORTHO05D006237 5.4e-47 192.6 251 48.6
FAN02G2008 Fragaria x ananassa HOM05D005159 ORTHO05D006237 5.4e-47 192.6 142 70.4
Lsat_1_v5_gn_8_24161 Lactuca sativa HOM05D005159 ORTHO05D006237 1.2e-46 191.4 244 48.8
FvH4_6g45790 Fragaria vesca HOM05D005159 ORTHO05D006237 2.0e-46 190.7 247 49.4
FAN09G0042 Fragaria x ananassa HOM05D005159 ORTHO05D006237 2.0e-46 190.7 247 49.4
RcHm_v2.0_Chr2g0163971 Rosa chinensis HOM05D005159 ORTHO05D006237 2.7e-46 190.3 299 45.5
Phvul.001G061500 Phaseolus vulgaris HOM05D005159 ORTHO05D006237 5.9e-46 189.1 185 57.8
ATR0691G244 Amborella trichopoda HOM05D005159 ORTHO05D006237 7.7e-46 188.7 199 54.8
FAN05G5180 Fragaria x ananassa HOM05D005159 ORTHO05D006237 1.3e-45 188.0 165 63.0
Lalb_Chr18g0059201 Lupinus albus HOM05D005159 ORTHO05D006237 1.3e-45 188.0 354 40.1
VMungo1383G3720 Vigna mungo HOM05D005159 ORTHO05D006237 1.7e-45 187.6 248 52.0
Os02g0728700 Oryza sativa ssp. japonica HOM05D005159 ORTHO05D006237 2.3e-45 187.2 244 50.4
AUR62011452 Chenopodium quinoa HOM05D005159 ORTHO05D006237 2.9e-45 186.8 272 43.8
Psat7g186040 Pisum sativum HOM05D002527 ORTHO05D002865 2.9e-45 186.8 197 55.3
Sopen02g034320 Solanum pennellii HOM05D005159 ORTHO05D006237 1.5e-44 184.5 367 38.7
Lj6g0020881 Lotus japonicus HOM05D005159 ORTHO05D006237 1.9e-44 184.1 221 51.1
AUR62026768 Chenopodium quinoa HOM05D005159 ORTHO05D006237 2.8e-43 180.3 134 69.4
TAR629G0318 Trochodendron aralioides HOM05D005159 ORTHO05D006237 3.6e-43 179.9 137 64.2
Rhsim08G0081100 Rhododendron simsii HOM05D005159 ORTHO05D006237 8.0e-43 178.7 271 46.1
vmacro18090 Vaccinium macrocarpon HOM05D005159 ORTHO05D006237 1.2e-41 174.9 265 44.5
COL.COLO4_37042 Corchorus olitorius HOM05D005159 ORTHO05D006237 3.4e-41 173.3 163 57.7
Zm00001eb253420 Zea mays HOM05D005159 ORTHO05D006237 4.9e-40 169.5 244 46.3
Nn8g41096 Nelumbo nucifera HOM05D005159 ORTHO05D006237 1.1e-39 168.3 182 53.3
CSS0028445 Camellia sinensis var. sinensis HOM05D005159 ORTHO05D006237 2.4e-39 167.2 155 58.7
BcaC08g44401 Brassica carinata HOM05D005159 ORTHO05D006237 3.2e-39 166.8 136 65.4
SEGI_21798 Sequoiadendron giganteum HOM05D005159 ORTHO05D006237 1.2e-38 164.9 132 65.9
TPR.G28602 Trifolium pratense HOM05D005159 ORTHO05D006237 1.0e-37 161.8 187 50.8
Haze_14082 Corylus avellana HOM05D005159 ORTHO05D006237 8.6e-37 158.7 267 40.4
arahy.Tifrunner.gnm1.ann1.3J3UL0 Arachis hypogaea HOM05D005159 ORTHO05D006237 1.8e-34 151.0 132 62.1
CARHR291790 Cardamine hirsuta HOM05D005159 ORTHO05D006237 7.5e-33 145.6 144 58.3
Lj7A7T32 Lonicera japonica HOM05D005159 ORTHO05D006237 4.1e-31 139.8 194 47.4
TAR629G0746 Trochodendron aralioides HOM05D005159 ORTHO05D006237 9.2e-31 138.7 94 69.1
Pp3c10_24110 Physcomitrium patens HOM05D005159 ORTHO05D006237 2.0e-30 137.5 138 52.2
FAN14G1445 Fragaria x ananassa HOM05D005159 ORTHO05D006237 1.0e-29 135.2 102 71.6
Mapoly0058s0026 Marchantia polymorpha HOM05D005159 ORTHO05D006237 1.0e-29 135.2 132 53.0
SMO196G0176 Selaginella moellendorffii HOM05D005159 ORTHO05D006237 3.0e-29 133.7 164 48.2
AUR62013504 Chenopodium quinoa HOM05D000258 ORTHO05D006237 1.3e-24 118.2 90 65.6
Oeu062205.1 Olea europaea HOM05D005159 ORTHO05D006237 3.0e-21 107.1 92 60.9
SMO234G0023 Selaginella moellendorffii HOM05D005159 ORTHO05D006237 5.1e-21 106.3 117 49.6
CBR_g4867 Chara braunii HOM05D005159 ORTHO05D006237 4.7e-19 99.8 136 41.2
MCO13G254 Micromonas commoda HOM05D005159 ORTHO05D006237 4.9e-16 89.7 133 38.3
Medtr8g085830 Medicago truncatula HOM05D005159 ORTHO05D006237 3.5e-14 83.6 98 53.1
arahy.Tifrunner.gnm1.ann1.YDKP0V Arachis hypogaea HOM05D005159 ORTHO05D006237 6.6e-13 79.3 83 57.8
AagrBONN_evm.TU.Sc2ySwM_369.363 Anthoceros agrestis HOM05D005159 ORTHO05D006237 5.6e-12 76.3 220 33.6
CBR_g52693 Chara braunii HOM05D005159 ORTHO05D006237 5.2e-10 69.7 135 31.1
Cre01.g052200 Chlamydomonas reinhardtii HOM05D005159 ORTHO05D006237 5.2e-10 69.7 141 32.6
QL06p007211 Quercus lobata HOM05D005159 ORTHO05D006237 1.2e-09 68.6 57 59.6
Dinv34878 Davidia involucrata HOM05D005159 ORTHO05D006237 8.4e-08 62.4 94 45.7


User provided reference genes

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