Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold10G05105 Striga asiatica HOM05D006303 ORTHO05D008007 1.1e-100 370.5 204 100.0
SalBow5G2627 Salvia bowleyana HOM05D006303 ORTHO05D008007 6.6e-37 158.7 222 51.4
SalBow5G4234 Salvia bowleyana HOM05D006303 ORTHO05D008007 1.9e-36 157.1 226 50.4
MSTRG.24747 Avicennia marina HOM05D006303 ORTHO05D008007 3.3e-36 156.4 183 54.1
QL06p003344 Quercus lobata HOM05D006303 ORTHO05D008007 1.7e-32 144.1 229 51.5
Peaxi162Scf00437g00041 Petunia axillaris HOM05D006303 ORTHO05D008007 6.4e-32 142.1 234 45.3
MSTRG.4016 Avicennia marina HOM05D006303 ORTHO05D008007 3.2e-31 139.8 240 44.6
Ciclev10005353m.g Citrus clementina HOM05D006303 ORTHO05D008007 2.7e-30 136.7 228 50.4
Manes.15G026800 Manihot esculenta HOM05D006303 ORTHO05D008007 3.5e-30 136.3 228 46.5
Oeu034363.1 Olea europaea HOM05D006303 ORTHO05D008007 3.5e-30 136.3 210 45.7
Migut.G00317 Erythranthe guttata HOM05D006303 ORTHO05D008007 6.0e-30 135.6 222 48.2
Sed0009344 Sechium edule HOM05D006303 ORTHO05D008007 7.8e-30 135.2 219 42.9
Solyc09g075750.1 Solanum lycopersicum HOM05D006303 ORTHO05D008007 7.8e-30 135.2 210 46.2
Cfa015618 Carpinus fangiana HOM05D006303 ORTHO05D008007 1.3e-29 134.4 218 48.6
Sopen09g030560 Solanum pennellii HOM05D006303 ORTHO05D008007 2.3e-29 133.7 219 44.3
CiPaw.01G163800 Carya illinoinensis HOM05D006303 ORTHO05D008007 3.0e-29 133.3 200 50.5
Haze_00877 Corylus avellana HOM05D006303 ORTHO05D008007 6.6e-29 132.1 217 48.8
Duzib212G0816 Durio zibethinus HOM05D006303 ORTHO05D008007 6.6e-29 132.1 241 41.1
TWI53G0528 Tripterygium wilfordii HOM05D006303 ORTHO05D008007 6.6e-29 132.1 225 44.9
TWI09G0488 Tripterygium wilfordii HOM05D006303 ORTHO05D008007 3.3e-28 129.8 225 45.3
Cc03_g03480 Coffea canephora HOM05D006303 ORTHO05D008007 5.6e-28 129.0 248 41.9
Ah.04g154500 Amaranthus hybridus HOM05D006303 ORTHO05D008007 1.6e-27 127.5 210 41.4
Hma1.2p1_0517F.1_g171030 Hydrangea macrophylla HOM05D006303 ORTHO05D008007 1.6e-27 127.5 228 46.5
COL.COLO4_06194 Corchorus olitorius HOM05D006303 ORTHO05D008007 2.1e-27 127.1 232 41.4
Dinv38426 Davidia involucrata HOM05D006303 ORTHO05D008007 2.1e-27 127.1 196 45.4
CiPaw.02G095400 Carya illinoinensis HOM05D006303 ORTHO05D008007 2.8e-27 126.7 205 45.4
Sabra10G0052900 Salix brachista HOM05D006303 ORTHO05D008007 2.8e-27 126.7 244 43.4
Gorai.006G237600 Gossypium raimondii HOM05D006303 ORTHO05D008007 6.2e-27 125.6 223 41.7
TAR365G0083 Trochodendron aralioides HOM05D006303 ORTHO05D008007 6.2e-27 125.6 202 46.5
Nitab4.5_0000260g0090 Nicotiana tabacum HOM05D006303 ORTHO05D008007 8.1e-27 125.2 226 43.4
Potri.010G090500 Populus trichocarpa HOM05D006303 ORTHO05D008007 1.1e-26 124.8 215 44.2
THA.LOC104802760 Tarenaya hassleriana HOM05D006303 ORTHO05D008007 1.1e-26 124.8 224 45.1
ClCG06G006020 Citrullus lanatus HOM05D006303 ORTHO05D008007 2.3e-26 123.6 226 39.8
FAN22G0434 Fragaria x ananassa HOM05D006303 ORTHO05D008007 2.3e-26 123.6 233 43.3
Lsat_1_v5_gn_5_148441 Lactuca sativa HOM05D006303 ORTHO05D008007 2.3e-26 123.6 214 45.8
Gohir.A09G214600 Gossypium hirsutum HOM05D006303 ORTHO05D008007 4.0e-26 122.9 223 41.7
Thecc.04G227500 Theobroma cacao HOM05D006303 ORTHO05D008007 4.0e-26 122.9 243 39.9
Manes.03G181100 Manihot esculenta HOM05D006303 ORTHO05D008007 5.2e-26 122.5 236 43.2
Duzib052G1015 Durio zibethinus HOM05D006303 ORTHO05D008007 6.8e-26 122.1 241 39.8
PGSC0003DMG400031852 Solanum tuberosum HOM05D006303 ORTHO05D008007 6.8e-26 122.1 220 45.0
Ca_24387_v3 Cicer arietinum L. HOM05D006303 ORTHO05D008007 8.9e-26 121.7 225 42.7
FvH4_4g15080 Fragaria vesca HOM05D006303 ORTHO05D008007 1.2e-25 121.3 233 42.9
HanXRQChr15g0466041 Helianthus annuus HOM05D006303 ORTHO05D008007 1.2e-25 121.3 210 46.2
Nn4g26265 Nelumbo nucifera HOM05D006303 ORTHO05D008007 1.5e-25 120.9 212 44.8
Gohir.D09G217100 Gossypium hirsutum HOM05D006303 ORTHO05D008007 2.0e-25 120.6 223 40.4
FAN12G1910 Fragaria x ananassa HOM05D006303 ORTHO05D008007 3.4e-25 119.8 233 42.5
Medtr5g005960 Medicago truncatula HOM05D006303 ORTHO05D008007 3.4e-25 119.8 222 42.8
FAN17G3084 Fragaria x ananassa HOM05D006303 ORTHO05D008007 4.4e-25 119.4 233 42.1
FAN07G1279 Fragaria x ananassa HOM05D006303 ORTHO05D008007 5.8e-25 119.0 233 41.6
Cpa.g.sc147.34 Carica papaya HOM05D006303 ORTHO05D008007 7.6e-25 118.6 210 43.8
SalBow2G0078 Salvia bowleyana HOM05D006303 ORTHO05D008007 7.6e-25 118.6 194 48.5
Nitab4.5_0007531g0010 Nicotiana tabacum HOM05D006303 ORTHO05D008007 9.9e-25 118.2 229 41.5
Atru.chr4.2516 Acer truncatum HOM05D006303 ORTHO05D008007 2.9e-24 116.7 230 46.5
Nn1g02244 Nelumbo nucifera HOM05D006303 ORTHO05D008007 2.9e-24 116.7 230 44.8
Lj1g0001361 Lotus japonicus HOM05D006303 ORTHO05D008007 3.7e-24 116.3 248 41.1
Glyma.11G004400 Glycine max HOM05D006303 ORTHO05D008007 1.9e-23 114.0 222 41.0
Dinv44508 Davidia involucrata HOM05D006303 ORTHO05D008007 2.4e-23 113.6 185 43.2
Psat4g211440 Pisum sativum HOM05D006303 ORTHO05D008007 4.1e-23 112.8 228 40.8
ECA234G3153 Erigeron canadensis HOM05D006303 ORTHO05D008007 5.4e-23 112.5 232 41.8
MELO3C014489.2 Cucumis melo HOM05D006303 ORTHO05D008007 7.1e-23 112.1 213 38.5
VMungo1215G3149 Vigna mungo HOM05D006303 ORTHO05D008007 7.1e-23 112.1 236 40.7
arahy.Tifrunner.gnm1.ann1.RSQ2PF Arachis hypogaea HOM05D006303 ORTHO05D008007 1.2e-22 111.3 239 38.5
DCAR_027185 Daucus carota HOM05D006303 ORTHO05D008007 2.1e-22 110.5 214 42.1
BcaNung03972 Brassica carinata HOM05D006303 ORTHO05D008007 3.5e-22 109.8 202 44.1
BolC9t53571H Brassica oleracea HOM05D006303 ORTHO05D008007 6.0e-22 109.0 194 45.4
CsaV3_6G038260 Cucumis sativus L. HOM05D006303 ORTHO05D008007 7.8e-22 108.6 197 39.6
CANSAT78G1152 Cannabis sativa HOM05D006303 ORTHO05D008007 1.3e-21 107.8 290 37.2
BcaC04g23610 Brassica carinata HOM05D006303 ORTHO05D008007 1.7e-21 107.5 194 45.9
PGR004G2192 Punica granatum HOM05D006303 ORTHO05D008007 1.7e-21 107.5 255 38.4
Aqoxy5G00502 Aquilegia oxysepala HOM05D006303 ORTHO05D008007 2.3e-21 107.1 198 42.9
Phvul.002G047200 Phaseolus vulgaris HOM05D006303 ORTHO05D008007 2.3e-21 107.1 172 45.3
A09p05910 Brassica napus HOM05D006303 ORTHO05D008007 3.0e-21 106.7 207 43.5
C09p06490 Brassica napus HOM05D006303 ORTHO05D008007 3.0e-21 106.7 194 44.8
BcaB04g19742 Brassica carinata HOM05D006303 ORTHO05D008007 3.9e-21 106.3 217 40.1
Sc13g0004270 Simmondsia chinensis HOM05D006303 ORTHO05D008007 3.9e-21 106.3 233 46.8
TPR.G37902 Trifolium pratense HOM05D006303 ORTHO05D008007 5.1e-21 105.9 238 46.2
Prupe.1G155600 Prunus persica HOM05D006303 ORTHO05D008007 6.6e-21 105.5 246 44.3
BraA09t36233Z Brassica rapa HOM05D006303 ORTHO05D008007 1.9e-20 104.0 187 44.9
A06p36730 Brassica napus HOM05D006303 ORTHO05D008007 2.5e-20 103.6 197 44.2
BraA06t26595Z Brassica rapa HOM05D006303 ORTHO05D008007 2.5e-20 103.6 197 44.2
MD13G1188500 Malus domestica HOM05D006303 ORTHO05D008007 2.5e-20 103.6 231 44.6
C07p41810 Brassica napus HOM05D006303 ORTHO05D008007 5.6e-20 102.4 202 42.1
AUR62038095 Chenopodium quinoa HOM05D006303 ORTHO05D008007 9.6e-20 101.7 162 41.4
Thhalv10004558m.g Eutrema salsugineum HOM05D006303 ORTHO05D008007 1.6e-19 100.9 191 42.9
Sp2g21520 Schrenkiella parvula HOM05D006303 ORTHO05D008007 1.6e-19 100.9 197 42.1
AL6G38240 Arabidopsis lyrata HOM05D006303 ORTHO05D008007 2.8e-19 100.1 157 45.9
BcaNung02811 Brassica carinata HOM05D006303 ORTHO05D008007 2.8e-19 100.1 202 41.6
BolC7t44712H Brassica oleracea HOM05D006303 ORTHO05D008007 2.8e-19 100.1 202 41.6
CARHR187140 Cardamine hirsuta HOM05D006303 ORTHO05D008007 2.8e-19 100.1 160 46.9
MD16G1188900 Malus domestica HOM05D006303 ORTHO05D008007 2.8e-19 100.1 221 44.3
SGA_v2.0_scaffold257G45734 Striga asiatica HOM05D006303 ORTHO05D008007 6.2e-19 99.0 227 39.2
Aqoxy2G03353 Aquilegia oxysepala HOM05D006303 ORTHO05D008007 8.1e-19 98.6 226 38.5
Carub.0006s2405 Capsella rubella HOM05D006303 ORTHO05D008007 1.8e-18 97.4 162 43.8
Rhsim04G0205200 Rhododendron simsii HOM05D006303 ORTHO05D008007 1.8e-18 97.4 164 44.5
Nn3g18018 Nelumbo nucifera HOM05D006303 ORTHO05D008007 6.8e-18 95.5 151 47.7
Oeu004490.1 Olea europaea HOM05D006303 ORTHO05D008007 8.9e-18 95.1 227 37.9
Lsat_1_v5_gn_7_65920 Lactuca sativa HOM05D006303 ORTHO05D008007 2.0e-17 94.0 173 45.1
AT5G26230 Arabidopsis thaliana HOM05D006303 ORTHO05D008007 3.4e-17 93.2 161 46.6
MBI17_g34761_MAGBIO Magnolia biondii HOM05D006303 ORTHO05D008007 3.4e-17 93.2 200 39.5
EL10As3g23363 Beta vulgaris HOM05D006303 ORTHO05D008007 4.4e-17 92.8 158 43.0
Nn2g13850 Nelumbo nucifera HOM05D006303 ORTHO05D008007 2.1e-14 84.0 216 35.2
Lj6C598T9 Lonicera japonica HOM05D006303 ORTHO05D008007 5.1e-13 79.3 86 59.3
PSO675G0548 Papaver somniferum HOM05D006303 ORTHO05D008007 5.1e-13 79.3 223 35.0
PSO135G0705 Papaver somniferum HOM05D006303 ORTHO05D008007 6.6e-13 79.0 170 40.0
PSO717G0040 Papaver somniferum HOM05D006303 ORTHO05D008007 8.7e-13 78.6 226 35.0
ClCG05G005270 Citrullus lanatus HOM05D006303 ORTHO05D008007 4.3e-12 76.3 207 34.3
arahy.Tifrunner.gnm1.ann1.KMTU0V Arachis hypogaea HOM05D006303 ORTHO05D008007 1.6e-11 74.3 203 41.4
arahy.Tifrunner.gnm1.ann1.S8XWMG Arachis hypogaea HOM05D006303 ORTHO05D008007 2.1e-11 73.9 204 41.2
Sed0019333 Sechium edule HOM05D006303 ORTHO05D008007 3.6e-11 73.2 152 38.8
GSVIVG01017928001 Vitis vinifera HOM05D006303 ORTHO05D008007 2.4e-10 70.5 82 58.5
Zm00001eb350820 Zea mays HOM05D006303 ORTHO05D008007 3.1e-10 70.1 228 36.4
AUR62038636 Chenopodium quinoa HOM05D006303 ORTHO05D008007 5.3e-10 69.3 78 51.3
Os05g0390600 Oryza sativa ssp. japonica HOM05D006303 ORTHO05D008007 5.3e-10 69.3 197 34.0
CsaV3_3G013490 Cucumis sativus L. HOM05D006303 ORTHO05D008007 6.9e-10 68.9 209 35.9
SEGI_38862 Sequoiadendron giganteum HOM05D006303 ORTHO05D008007 6.9e-10 68.9 146 39.0
ATR0626G102 Amborella trichopoda HOM05D006303 ORTHO05D008007 2.6e-09 67.0 135 42.2
MELO3C006546.2 Cucumis melo HOM05D006303 ORTHO05D008007 2.6e-09 67.0 209 33.0
PSO384G0046 Papaver somniferum HOM05D006303 ORTHO05D008007 7.6e-09 65.5 170 35.9
HPP92_003595 Vanilla planifolia HOM05D006303 ORTHO05D008007 5.4e-07 59.3 83 51.8
ATR0100G018 Amborella trichopoda HOM05D004504 ORTHO05D005324 7.9e-06 55.5 141 32.6


User provided reference genes

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