Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold109G31149 Striga asiatica HOM05D006612 ORTHO05D009014 9.5e-181 636.7 323 100.0
SGA_v2.0_scaffold181G39686 Striga asiatica HOM05D006612 ORTHO05D009014 1.4e-128 463.4 408 63.7
SGA_v2.0_scaffold90G27630 Striga asiatica HOM05D006612 ORTHO05D009014 7.1e-59 231.9 238 45.8
SGA_v2.0_scaffold33G13376 Striga asiatica HOM05D006612 ORTHO05D009014 4.6e-58 229.2 130 86.2
Cc07_g18580 Coffea canephora HOM05D006612 ORTHO05D009014 2.5e-40 170.2 394 32.7
SGA_v2.0_scaffold67G22672 Striga asiatica HOM05D006612 ORTHO05D009014 4.3e-40 169.5 365 31.5
SGA_v2.0_scaffold37G14810 Striga asiatica HOM05D006612 ORTHO05D009014 1.7e-36 157.5 388 28.6
SGA_v2.0_scaffold289G47248 Striga asiatica HOM05D006612 ORTHO05D009014 1.9e-35 154.1 310 29.0
SGA_v2.0_scaffold30G12440 Striga asiatica HOM05D006612 ORTHO05D009014 1.8e-33 147.5 264 34.1
SGA_v2.0_scaffold10G05328 Striga asiatica HOM05D006612 ORTHO05D009014 2.3e-33 147.1 293 30.7
Lsat_1_v5_gn_1_29400 Lactuca sativa HOM05D006612 ORTHO05D009014 3.0e-33 146.7 236 34.3
SGA_v2.0_scaffold20G09078 Striga asiatica HOM05D006612 ORTHO05D009014 6.7e-33 145.6 246 33.7
SGA_v2.0_scaffold35G14178 Striga asiatica HOM05D006612 ORTHO05D009014 1.5e-32 144.4 250 34.4
SGA_v2.0_scaffold10G05367 Striga asiatica HOM05D006612 ORTHO05D009014 4.3e-32 142.9 260 29.6
SGA_v2.0_scaffold19G08816 Striga asiatica HOM05D006612 ORTHO05D009014 5.6e-32 142.5 310 31.3
SGA_v2.0_scaffold478G52233 Striga asiatica HOM05D006612 ORTHO05D009014 9.6e-32 141.7 311 27.3
Lsat_1_v5_gn_7_34501 Lactuca sativa HOM05D006612 ORTHO05D009014 1.3e-31 141.4 324 28.1
SGA_v2.0_scaffold121G33153 Striga asiatica HOM05D006612 ORTHO05D009014 6.2e-31 139.0 331 32.6
SGA_v2.0_scaffold33G13377 Striga asiatica HOM05D006612 ORTHO05D009014 1.4e-30 137.9 76 89.5
SGA_v2.0_scaffold1G00633 Striga asiatica HOM05D006612 ORTHO05D009014 1.8e-30 137.5 210 35.7
SGA_v2.0_scaffold346G49531 Striga asiatica HOM05D006612 ORTHO05D009014 3.1e-30 136.7 404 27.7
SGA_v2.0_scaffold319G48529 Striga asiatica HOM05D006612 ORTHO05D009014 1.7e-28 131.0 165 40.0
SGA_v2.0_scaffold141G35579 Striga asiatica HOM05D006612 ORTHO05D009014 8.4e-28 128.6 173 38.7
SGA_v2.0_scaffold511G52629 Striga asiatica HOM05D006612 ORTHO05D009014 8.4e-28 128.6 327 32.7
SGA_v2.0_scaffold187G40262 Striga asiatica HOM05D006612 ORTHO05D009014 4.6e-26 122.9 308 28.6
SGA_v2.0_scaffold106G30692 Striga asiatica HOM05D006612 ORTHO05D009014 3.0e-25 120.2 93 60.2
Cc04_g13910 Coffea canephora HOM05D006612 ORTHO05D009014 8.7e-25 118.6 218 37.2
SGA_v2.0_scaffold1973G54063 Striga asiatica HOM05D006612 ORTHO05D009014 1.5e-24 117.9 168 33.9
SGA_v2.0_scaffold83G26370 Striga asiatica HOM05D006612 ORTHO05D009014 4.3e-24 116.3 236 31.4
SGA_v2.0_scaffold263G45988 Striga asiatica HOM05D006612 ORTHO05D009014 9.6e-24 115.2 347 26.8
SGA_v2.0_scaffold87G27099 Striga asiatica HOM05D031284 ORTHO05D009014 1.6e-23 114.4 155 34.2
SGA_v2.0_scaffold3G01561 Striga asiatica HOM05D006612 ORTHO05D009014 2.1e-23 114.0 234 30.3
SGA_v2.0_scaffold169G38616 Striga asiatica HOM05D006612 ORTHO05D009014 9.0e-22 108.6 236 30.9
ECA246G2421 Erigeron canadensis HOM05D000096 ORTHO05D000045 8.4e-20 102.1 241 27.8
SGA_v2.0_scaffold1G00207 Striga asiatica HOM05D006612 ORTHO05D009014 1.9e-19 100.9 139 36.0
Lsat_1_v5_gn_2_22101 Lactuca sativa HOM05D006612 ORTHO05D009014 3.5e-18 96.7 218 27.5
SGA_v2.0_scaffold2648G54169 Striga asiatica HOM05D006612 ORTHO05D009014 6.0e-18 95.9 315 24.4
SGA_v2.0_scaffold46G17404 Striga asiatica HOM05D006612 ORTHO05D009014 2.3e-17 94.0 211 28.0
SGA_v2.0_scaffold14G06973 Striga asiatica HOM05D006612 ORTHO05D009014 3.9e-17 93.2 235 30.2
Cc08_g02920 Coffea canephora HOM05D006612 ORTHO05D009014 6.7e-17 92.4 124 36.3
SGA_v2.0_scaffold154G37090 Striga asiatica HOM05D006612 ORTHO05D009014 6.7e-17 92.4 239 29.7
SGA_v2.0_scaffold188G40334 Striga asiatica HOM05D006612 ORTHO05D009014 2.5e-16 90.5 208 24.5
SGA_v2.0_scaffold27G11559 Striga asiatica HOM05D006612 ORTHO05D009014 5.7e-16 89.4 206 31.1
SGA_v2.0_scaffold15G07247 Striga asiatica HOM05D006612 ORTHO05D009014 1.6e-15 87.8 302 24.2
Cc02_g03800 Coffea canephora HOM05D006612 ORTHO05D009014 6.3e-15 85.9 165 27.9
SGA_v2.0_scaffold122G33346 Striga asiatica HOM05D031284 ORTHO05D009014 1.4e-14 84.7 92 38.0
SGA_v2.0_scaffold123G33418 Striga asiatica HOM05D006612 ORTHO05D009014 1.4e-14 84.7 305 25.9
Cc09_g02230 Coffea canephora HOM05D006612 ORTHO05D009014 2.4e-14 84.0 239 26.8
SGA_v2.0_scaffold705G53488 Striga asiatica HOM05D006612 ORTHO05D009014 5.3e-14 82.8 238 23.5
Cc07_g15780 Coffea canephora HOM05D006612 ORTHO05D009014 9.0e-14 82.0 69 50.7
Cc11_g04420 Coffea canephora HOM05D006612 ORTHO05D009014 2.6e-13 80.5 110 37.3
SGA_v2.0_scaffold52G19153 Striga asiatica HOM05D006612 ORTHO05D009014 2.2e-12 77.4 240 22.9
SGA_v2.0_scaffold53G19313 Striga asiatica HOM05D021043 ORTHO05D009014 2.9e-12 77.0 102 41.2
Oeu027742.1 Olea europaea HOM05D008860 ORTHO05D010619 3.8e-12 76.6 349 22.9
SGA_v2.0_scaffold32G13336 Striga asiatica HOM05D021043 ORTHO05D009014 3.8e-12 76.6 102 41.2
SGA_v2.0_scaffold618G53217 Striga asiatica HOM05D021043 ORTHO05D009014 3.8e-12 76.6 120 32.5
SGA_v2.0_scaffold24G10704 Striga asiatica HOM05D021043 ORTHO05D009014 5.0e-12 76.3 102 41.2
SGA_v2.0_scaffold213G42222 Striga asiatica HOM05D006612 ORTHO05D009014 1.1e-11 75.1 227 26.0
Cc08_g06650 Coffea canephora HOM05D006612 ORTHO05D009014 2.5e-11 73.9 136 31.6
Cc11_g04430 Coffea canephora HOM05D006612 ORTHO05D009014 5.5e-11 72.8 75 45.3
SGA_v2.0_scaffold158G37500 Striga asiatica HOM05D006612 ORTHO05D009014 7.2e-11 72.4 115 35.7
SGA_v2.0_scaffold19G08855 Striga asiatica HOM05D006612 ORTHO05D009014 1.2e-10 71.6 68 45.6
SGA_v2.0_scaffold144G35921 Striga asiatica HOM05D006612 ORTHO05D009014 2.1e-10 70.9 69 40.6
SGA_v2.0_scaffold146G36211 Striga asiatica HOM05D006612 ORTHO05D009014 2.1e-10 70.9 76 39.5
SGA_v2.0_scaffold1G00025 Striga asiatica HOM05D006612 ORTHO05D009014 6.1e-10 69.3 69 39.1
Cc09_g02240 Coffea canephora HOM05D006612 ORTHO05D009014 2.3e-09 67.4 69 37.7
SGA_v2.0_scaffold4G02280 Striga asiatica HOM05D021043 ORTHO05D009014 3.9e-09 66.6 102 37.3
Nitab4.5_0028843g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 5.1e-09 66.2 240 24.6
Lsat_1_v5_gn_8_167080 Lactuca sativa HOM05D006612 ORTHO05D009014 6.7e-09 65.9 70 42.9
SGA_v2.0_scaffold135G34887 Striga asiatica HOM05D006612 ORTHO05D009014 1.9e-08 64.3 183 30.6
SGA_v2.0_scaffold41G15809 Striga asiatica HOM05D006612 ORTHO05D009014 2.2e-07 60.8 172 27.9
Cc00_g13000 Coffea canephora HOM05D006612 ORTHO05D009014 2.8e-07 60.5 69 44.9
Peaxi162Scf00519g00002 Petunia axillaris HOM05D002261 ORTHO05D002334 2.8e-07 60.5 244 26.2
Cc10_g10270 Coffea canephora HOM05D017605 ORTHO05D009014 3.7e-07 60.1 242 24.8
PGSC0003DMG400017712 Solanum tuberosum HOM05D002261 ORTHO05D002334 3.7e-07 60.1 201 23.9
Nitab4.5_0003673g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 6.3e-07 59.3 262 23.3
SGA_v2.0_scaffold144G35923 Striga asiatica HOM05D006612 ORTHO05D009014 6.9e-06 55.8 159 26.4
Actinidia03272 Actinidia chinensis HOM05D006612 ORTHO05D010619 9.1e-06 55.5 150 23.3


User provided reference genes

Program Settings