Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold109G31134 Striga asiatica HOM05D004790 ORTHO05D005678 2.5e-303 1044.6 526 100.0
Migut.H01089 Erythranthe guttata HOM05D004790 ORTHO05D005678 8.7e-200 700.7 529 67.7
MSTRG.12822 Avicennia marina HOM05D004790 ORTHO05D005678 2.5e-199 699.1 525 67.2
Oeu045846.1 Olea europaea HOM05D004790 ORTHO05D005678 1.2e-188 663.7 526 63.5
SalBow7G3762 Salvia bowleyana HOM05D004790 ORTHO05D005678 5.0e-187 658.3 549 61.2
Oeu029923.1 Olea europaea HOM05D004790 ORTHO05D005678 2.4e-181 639.4 530 62.3
Dinv23649 Davidia involucrata HOM05D004790 ORTHO05D005678 5.9e-172 608.2 534 58.8
CSS0024255 Camellia sinensis var. sinensis HOM05D004790 ORTHO05D005678 7.7e-172 607.8 549 57.6
CSS0033247 Camellia sinensis var. sinensis HOM05D004790 ORTHO05D005678 7.7e-172 607.8 549 57.6
unitig_26.g9948 Utricularia gibba HOM05D004790 ORTHO05D005678 2.5e-170 602.8 527 57.5
SalBow7G1856 Salvia bowleyana HOM05D004790 ORTHO05D005678 2.7e-169 599.4 469 64.6
vmacro12295 Vaccinium macrocarpon HOM05D004790 ORTHO05D005678 1.0e-168 597.4 552 56.5
Cc05_g07060 Coffea canephora HOM05D004790 ORTHO05D005678 1.4e-168 597.0 527 57.9
Actinidia09859 Actinidia chinensis HOM05D004790 ORTHO05D005678 4.0e-160 568.9 553 55.0
Actinidia11039 Actinidia chinensis HOM05D004790 ORTHO05D005678 2.0e-159 566.6 538 55.8
PGSC0003DMG400021668 Solanum tuberosum HOM05D004790 ORTHO05D005678 1.4e-157 560.5 531 56.3
Manes.13G147300 Manihot esculenta HOM05D004790 ORTHO05D005678 1.2e-156 557.4 528 55.1
Atru.chr6.3004 Acer truncatum HOM05D004790 ORTHO05D005678 4.5e-156 555.4 527 55.0
Lj1A724T21 Lonicera japonica HOM05D004790 ORTHO05D005678 1.7e-155 553.5 514 56.4
Nitab4.5_0007168g0010 Nicotiana tabacum HOM05D004790 ORTHO05D005678 2.9e-155 552.7 535 55.7
Peaxi162Scf00206g00710 Petunia axillaris HOM05D004790 ORTHO05D005678 3.8e-155 552.4 532 54.7
Nitab4.5_0000585g0100 Nicotiana tabacum HOM05D004790 ORTHO05D005678 1.5e-154 550.4 533 55.7
CAN.G1655.2 Capsicum annuum HOM05D004790 ORTHO05D005678 2.1e-153 546.6 531 54.8
Rhsim06G0143900 Rhododendron simsii HOM05D004790 ORTHO05D005678 3.6e-153 545.8 549 52.6
Gohir.D04G143900 Gossypium hirsutum HOM05D004790 ORTHO05D005678 3.0e-152 542.7 527 53.1
Gorai.012G129400 Gossypium raimondii HOM05D004790 ORTHO05D005678 3.0e-152 542.7 527 53.1
Hma1.2p1_0213F.1_g090370 Hydrangea macrophylla HOM05D004790 ORTHO05D005678 5.7e-151 538.5 554 52.2
Ciclev10014904m.g Citrus clementina HOM05D004790 ORTHO05D005678 1.7e-150 537.0 527 53.1
Gohir.A04G104200 Gossypium hirsutum HOM05D004790 ORTHO05D005678 2.2e-150 536.6 527 52.8
MD17G1241500 Malus domestica HOM05D004790 ORTHO05D005678 2.2e-150 536.6 527 54.5
Duzib248G1314 Durio zibethinus HOM05D004790 ORTHO05D005678 2.9e-150 536.2 525 51.8
Prupe.3G136400 Prunus persica HOM05D004790 ORTHO05D005678 6.4e-150 535.0 538 52.4
Sopen10g004250 Solanum pennellii HOM05D004790 ORTHO05D005678 2.4e-149 533.1 534 54.1
TWI36G0090 Tripterygium wilfordii HOM05D004790 ORTHO05D005678 3.2e-149 532.7 536 51.7
MD09G1249000 Malus domestica HOM05D004790 ORTHO05D005678 5.4e-149 531.9 527 53.3
Solyc10g008420.3 Solanum lycopersicum HOM05D004790 ORTHO05D005678 7.0e-149 531.6 534 54.1
Thecc.02G178300 Theobroma cacao HOM05D004790 ORTHO05D005678 7.0e-149 531.6 529 52.9
COL.COLO4_30176 Corchorus olitorius HOM05D004790 ORTHO05D005678 2.3e-147 526.6 525 52.8
MELO3C013614.2 Cucumis melo HOM05D004790 ORTHO05D005678 5.0e-147 525.4 527 52.4
CsaV3_6G012960 Cucumis sativus L. HOM05D004790 ORTHO05D005678 6.6e-147 525.0 527 52.4
Manes.12G090600 Manihot esculenta HOM05D004790 ORTHO05D005678 1.9e-146 523.5 527 52.0
FvH4_6g26160 Fragaria vesca HOM05D004790 ORTHO05D005678 4.7e-145 518.8 529 52.7
ClCG02G017590 Citrullus lanatus HOM05D004790 ORTHO05D005678 4.0e-144 515.8 539 50.1
Nn1g04055 Nelumbo nucifera HOM05D004790 ORTHO05D005678 4.0e-144 515.8 543 53.8
Eucgr.A01811 Eucalyptus grandis HOM05D004790 ORTHO05D005678 5.2e-144 515.4 531 51.6
FAN02G0059 Fragaria x ananassa HOM05D004790 ORTHO05D005678 1.5e-143 513.8 533 53.5
RcHm_v2.0_Chr2g0126141 Rosa chinensis HOM05D004790 ORTHO05D005678 3.4e-143 512.7 537 51.8
CiPaw.03G175600 Carya illinoinensis HOM05D004790 ORTHO05D005678 1.3e-142 510.8 530 50.8
DCAR_013003 Daucus carota HOM05D004790 ORTHO05D005678 1.7e-142 510.4 533 51.2
Sed0002654 Sechium edule HOM05D004790 ORTHO05D005678 6.4e-142 508.4 534 51.3
TAR627G0452 Trochodendron aralioides HOM05D004790 ORTHO05D005678 8.3e-142 508.1 531 50.1
Cpa.g.sc34.151 Carica papaya HOM05D004790 ORTHO05D005678 6.0e-140 501.9 527 49.5
Potri.013G133200 Populus trichocarpa HOM05D004790 ORTHO05D005678 1.3e-139 500.7 526 48.1
Cfa014604 Carpinus fangiana HOM05D004790 ORTHO05D005678 2.3e-139 500.0 526 50.6
PGR042G3525 Punica granatum HOM05D004790 ORTHO05D005678 5.0e-139 498.8 528 49.6
CANSAT11G0193 Cannabis sativa HOM05D004790 ORTHO05D005678 1.9e-138 496.9 546 50.2
QL08p038483 Quercus lobata HOM05D004790 ORTHO05D005678 4.3e-138 495.7 524 50.4
Sabra13G0113200 Salix brachista HOM05D004790 ORTHO05D005678 4.0e-136 489.2 526 47.3
Lsat_1_v5_gn_8_133340 Lactuca sativa HOM05D004790 ORTHO05D005678 5.8e-135 485.3 532 48.5
Hund01104 Selenicereus undatus HOM05D004790 ORTHO05D005678 2.2e-134 483.4 550 48.7
Haze_13149 Corylus avellana HOM05D004790 ORTHO05D005678 3.7e-134 482.6 518 50.8
Ah.01g015210 Amaranthus hybridus HOM05D004790 ORTHO05D005678 1.9e-133 480.3 543 47.1
HanXRQChr17g0553511 Helianthus annuus HOM05D004790 ORTHO05D005678 3.2e-133 479.6 529 49.9
Phvul.005G104500 Phaseolus vulgaris HOM05D004790 ORTHO05D005678 1.2e-132 477.6 528 48.7
Gorai.013G075500 Gossypium raimondii HOM05D004790 ORTHO05D005678 4.6e-132 475.7 525 49.5
VMungo1080G1693 Vigna mungo HOM05D004790 ORTHO05D005678 1.0e-131 474.6 523 48.9
Glyma.12G203700 Glycine max HOM05D004790 ORTHO05D005678 1.3e-131 474.2 527 49.5
Lsat_1_v5_gn_4_65660 Lactuca sativa HOM05D004790 ORTHO05D005678 5.1e-131 472.2 529 48.0
EL10Ac9g20754 Beta vulgaris HOM05D004790 ORTHO05D005678 1.9e-130 470.3 547 45.9
Sabra19G0112400 Salix brachista HOM05D004790 ORTHO05D005678 7.3e-130 468.4 531 46.7
Sabra19G0111100 Salix brachista HOM05D004790 ORTHO05D005678 4.7e-129 465.7 532 46.2
Glyma.13G298000 Glycine max HOM05D004790 ORTHO05D005678 8.1e-129 464.9 527 48.6
Sc12g0003010 Simmondsia chinensis HOM05D004790 ORTHO05D005678 1.3e-126 457.6 552 46.6
FAN05G3153 Fragaria x ananassa HOM05D004790 ORTHO05D005678 2.4e-125 453.4 476 52.3
MBI19_g19847_MAGBIO Magnolia biondii HOM05D004790 ORTHO05D005678 2.4e-125 453.4 558 43.5
Gohir.D13G066200 Gossypium hirsutum HOM05D004790 ORTHO05D005678 3.3e-122 443.0 524 47.5
AL7G24340 Arabidopsis lyrata HOM05D004790 ORTHO05D005678 5.6e-122 442.2 530 44.7
THA.LOC104804061 Tarenaya hassleriana HOM05D004790 ORTHO05D005678 5.6e-122 442.2 529 45.0
Thhalv10024944m.g Eutrema salsugineum HOM05D004790 ORTHO05D005678 1.4e-120 437.6 528 43.4
Lalb_Chr14g0366851 Lupinus albus HOM05D004790 ORTHO05D005678 1.4e-120 437.6 511 45.8
AT4G28260 Arabidopsis thaliana HOM05D004790 ORTHO05D005678 1.2e-119 434.5 529 44.2
Carub.0007s1250 Capsella rubella HOM05D004790 ORTHO05D005678 4.4e-119 432.6 533 43.5
CARHR235970 Cardamine hirsuta HOM05D004790 ORTHO05D005678 4.4e-119 432.6 529 43.5
A03p57970 Brassica napus HOM05D004790 ORTHO05D005678 2.2e-118 430.3 527 43.8
AUR62037353 Chenopodium quinoa HOM05D004790 ORTHO05D005678 2.2e-118 430.3 540 44.1
BraA03t14860Z Brassica rapa HOM05D004790 ORTHO05D005678 2.9e-118 429.9 527 43.8
Sp7g26220 Schrenkiella parvula HOM05D004790 ORTHO05D005678 4.9e-118 429.1 528 43.9
Lalb_Chr22g0356521 Lupinus albus HOM05D004790 ORTHO05D005678 1.1e-117 427.9 512 45.1
BolC7t46084H Brassica oleracea HOM05D004790 ORTHO05D005678 6.0e-116 422.2 528 43.8
A08p20170 Brassica napus HOM05D004790 ORTHO05D005678 1.3e-115 421.0 530 44.3
C08p10710 Brassica napus HOM05D004790 ORTHO05D005678 6.6e-115 418.7 528 43.4
BraA08t33977Z Brassica rapa HOM05D004790 ORTHO05D005678 6.6e-115 418.7 531 43.9
BcaC06g32632 Brassica carinata HOM05D004790 ORTHO05D005678 4.3e-114 416.0 521 44.0
C07p56090 Brassica napus HOM05D004790 ORTHO05D005678 5.6e-114 415.6 529 43.9
Lj3g0014290 Lotus japonicus HOM05D004790 ORTHO05D005678 9.6e-114 414.8 527 45.5
BolC8t48743H Brassica oleracea HOM05D004790 ORTHO05D005678 1.3e-113 414.5 528 43.4
BcaB03g12561 Brassica carinata HOM05D004790 ORTHO05D005678 1.6e-113 414.1 528 43.8
Aa31LG11G10330 Aethionema arabicum HOM05D004790 ORTHO05D005678 1.4e-112 411.0 527 44.0
SHI10412 Sapria himalayana HOM05D004790 ORTHO05D005678 6.9e-112 408.7 564 42.2
Medtr2g090285 Medicago truncatula HOM05D004790 ORTHO05D005678 1.5e-111 407.5 531 42.0
Ca_01506_v3 Cicer arietinum L. HOM05D004790 ORTHO05D005678 3.8e-110 402.9 534 41.0
Aqoxy1G02499 Aquilegia oxysepala HOM05D004790 ORTHO05D005678 4.2e-109 399.4 532 42.1
PSO675G6339 Papaver somniferum HOM05D004790 ORTHO05D005678 9.3e-109 398.3 540 42.8
Duzib052G0346 Durio zibethinus HOM05D004790 ORTHO05D005678 2.7e-108 396.7 525 42.7
ECA234G1653 Erigeron canadensis HOM05D004790 ORTHO05D005678 7.9e-108 395.2 487 44.6
PSO541G2110 Papaver somniferum HOM05D004790 ORTHO05D005678 1.1e-106 391.3 540 42.2
Hma1.2p1_3039F.1_g331970 Hydrangea macrophylla HOM05D004790 ORTHO05D005678 1.5e-106 391.0 512 42.4
Gohir.A13G055800 Gossypium hirsutum HOM05D004790 ORTHO05D005678 1.9e-106 390.6 526 43.3
TPR.G6443 Trifolium pratense HOM05D004790 ORTHO05D005678 1.1e-98 364.8 537 39.1
arahy.Tifrunner.gnm1.ann1.1EW4X0 Arachis hypogaea HOM05D004790 ORTHO05D005678 7.4e-98 362.1 534 39.5
arahy.Tifrunner.gnm1.ann1.DEE7JK Arachis hypogaea HOM05D004790 ORTHO05D005678 9.6e-98 361.7 536 39.9
Zm00001eb044390 Zea mays HOM05D004790 ORTHO05D005678 2.8e-97 360.1 518 41.7
Zm00001eb044450 Zea mays HOM05D004790 ORTHO05D005678 6.5e-94 349.0 505 41.0
Hma1.2p1_1201F.1_g266610 Hydrangea macrophylla HOM05D004790 ORTHO05D005678 9.3e-93 345.1 512 39.3
BcaC06g32633 Brassica carinata HOM05D004790 ORTHO05D005678 1.0e-91 341.7 421 44.9
GSVIVG01020532001 Vitis vinifera HOM05D004790 ORTHO05D005678 1.3e-91 341.3 530 40.9
Hma1.2p1_3039F.1_g331990 Hydrangea macrophylla HOM05D004790 ORTHO05D005678 4.1e-88 329.7 521 39.2
ATR0680G165 Amborella trichopoda HOM05D004790 ORTHO05D005678 1.2e-87 328.2 524 38.2
Hma1.2p1_1201F.1_g266630 Hydrangea macrophylla HOM05D004790 ORTHO05D005678 4.5e-87 326.2 521 39.2
CDE02G0639 Ceratophyllum demersum HOM05D004790 ORTHO05D005678 5.5e-85 319.3 551 37.0
Hma1.2p1_3039F.1_g331980 Hydrangea macrophylla HOM05D004790 ORTHO05D005678 2.2e-81 307.4 533 37.5
Os10g0500600 Oryza sativa ssp. japonica HOM05D004790 ORTHO05D005678 1.2e-79 301.6 469 38.0
Hma1.2p1_3039F.1_g332010 Hydrangea macrophylla HOM05D004790 ORTHO05D005678 2.5e-77 293.9 480 37.1
Hma1.2p1_1201F.1_g266650 Hydrangea macrophylla HOM05D004790 ORTHO05D005678 5.5e-77 292.7 480 36.5
Aa31LG11G14100 Aethionema arabicum HOM05D004790 ORTHO05D005678 2.4e-64 250.8 515 33.0
Hma1.2p1_1201F.1_g266640 Hydrangea macrophylla HOM05D004790 ORTHO05D005678 1.4e-56 224.9 478 33.3
Hma1.2p1_3039F.1_g332000 Hydrangea macrophylla HOM05D004790 ORTHO05D005678 1.4e-56 224.9 478 33.3
Hma1.2p1_1201F.1_g266660 Hydrangea macrophylla HOM05D004790 ORTHO05D005678 9.1e-56 222.2 384 38.0
Psat5g271320 Pisum sativum HOM05D004790 ORTHO05D005678 1.6e-55 221.5 527 28.5
HPP92_027303 Vanilla planifolia HOM05D004790 ORTHO05D005678 2.7e-47 194.1 289 43.3
Dinv26430 Davidia involucrata HOM05D004790 ORTHO05D005678 4.2e-45 186.8 309 37.9
AUR62042487 Chenopodium quinoa HOM05D004790 ORTHO05D005678 2.4e-40 171.0 172 49.4
Prupe.3G136600 Prunus persica HOM05D004790 ORTHO05D005678 3.5e-39 167.2 142 59.2
SEGI_40185 Sequoiadendron giganteum HOM05D004790 ORTHO05D005678 2.3e-38 164.5 475 29.1
Mapoly0001s0243 Marchantia polymorpha HOM05D004790 ORTHO05D005678 1.5e-37 161.8 519 28.5
FAN05G5699 Fragaria x ananassa HOM05D004790 ORTHO05D005678 1.9e-37 161.4 143 57.3
Pp3c8_24840 Physcomitrium patens HOM05D004790 ORTHO05D005678 3.6e-36 157.1 542 25.5
Pp3c23_21860 Physcomitrium patens HOM05D004790 ORTHO05D005678 4.7e-36 156.8 547 26.3
SEGI_15900 Sequoiadendron giganteum HOM05D004790 ORTHO05D005678 4.9e-33 146.7 410 29.0
SMO111G0050 Selaginella moellendorffii HOM05D004790 ORTHO05D005678 1.3e-25 122.1 455 25.3
Peaxi162Scf00132g00037 Petunia axillaris HOM05D004790 ORTHO05D005678 1.7e-25 121.7 453 23.6
Sabra13G0109400 Salix brachista HOM05D004790 ORTHO05D005678 5.2e-19 100.1 72 63.9
Hma1.2p1_0002F.1_g002210 Hydrangea macrophylla HOM05D004790 ORTHO05D005678 4.4e-18 97.1 299 29.4
Pp3c20_1230 Physcomitrium patens HOM05D004790 ORTHO05D005678 2.9e-17 94.4 395 25.1
TPR.G11082 Trifolium pratense HOM05D004790 ORTHO05D005678 2.9e-17 94.4 486 23.5
GSVIVG01029526001 Vitis vinifera HOM05D004790 ORTHO05D005678 4.6e-15 87.0 82 51.2
Sabra13G0113000 Salix brachista HOM05D004790 ORTHO05D005678 1.1e-13 82.4 107 38.3
AagrBONN_evm.TU.Sc2ySwM_228.2505 Anthoceros agrestis HOM05D004790 ORTHO05D005678 3.1e-11 74.3 148 29.7
FAN05G5117 Fragaria x ananassa HOM05D000001 ORTHO05D000424 4.0e-11 73.9 55 61.8
Hma1.2p1_0002F.1_g002220 Hydrangea macrophylla HOM05D004790 ORTHO05D005678 5.2e-11 73.6 82 43.9
Dinv07566 Davidia involucrata HOM05D004790 ORTHO05D005678 6.8e-11 73.2 187 27.8
Sabra13G0109000 Salix brachista HOM05D000001 ORTHO05D000424 2.6e-10 71.2 54 51.9
Dinv17315 Davidia involucrata HOM05D004790 ORTHO05D005678 2.2e-09 68.2 87 35.6
Psat2g052560 Pisum sativum HOM05D004790 ORTHO05D005678 4.1e-08 63.9 179 27.9
AagrBONN_evm.TU.Sc2ySwM_228.2348 Anthoceros agrestis HOM05D004790 ORTHO05D007542 3.5e-07 60.8 61 37.7


User provided reference genes

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