Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold109G31132 Striga asiatica HOM05D006652 ORTHO05D008645 3.0e-279 964.5 488 100.0
SalBow7G3656 Salvia bowleyana HOM05D006652 ORTHO05D008645 2.5e-148 529.6 488 60.5
MSTRG.14312 Avicennia marina HOM05D006652 ORTHO05D008645 4.2e-148 528.9 485 60.4
Migut.H02157 Erythranthe guttata HOM05D006652 ORTHO05D008645 7.5e-145 518.1 442 63.1
Peaxi162Scf00241g00812 Petunia axillaris HOM05D006652 ORTHO05D008645 1.6e-139 500.4 444 59.7
CAN.G782.5 Capsicum annuum HOM05D006652 ORTHO05D008645 4.7e-139 498.8 450 59.8
Nitab4.5_0000822g0100 Nicotiana tabacum HOM05D006652 ORTHO05D008645 4.7e-139 498.8 452 58.8
Solyc10g008020.3 Solanum lycopersicum HOM05D006652 ORTHO05D008645 7.5e-137 491.5 440 60.2
Lj8C103T10 Lonicera japonica HOM05D006652 ORTHO05D008645 2.2e-136 490.0 463 59.0
unitig_21.g20276 Utricularia gibba HOM05D006652 ORTHO05D008645 2.8e-136 489.6 446 58.3
Sopen10g003890 Solanum pennellii HOM05D006652 ORTHO05D008645 3.7e-136 489.2 440 60.0
TAR629G0548 Trochodendron aralioides HOM05D006652 ORTHO05D008645 3.7e-136 489.2 444 58.3
Hma1.2p1_0166F.1_g073540 Hydrangea macrophylla HOM05D006652 ORTHO05D008645 4.8e-136 488.8 438 59.6
GSVIVG01020686001 Vitis vinifera HOM05D006652 ORTHO05D008645 1.4e-135 487.3 465 57.4
QL08p041412 Quercus lobata HOM05D006652 ORTHO05D008645 7.7e-134 481.5 439 58.8
CSS0047332 Camellia sinensis var. sinensis HOM05D006652 ORTHO05D008645 1.0e-133 481.1 436 59.2
Nitab4.5_0008146g0020 Nicotiana tabacum HOM05D006652 ORTHO05D008645 1.0e-133 481.1 445 58.9
vmacro09218 Vaccinium macrocarpon HOM05D006652 ORTHO05D008645 1.0e-133 481.1 486 55.3
Aqoxy4G00418 Aquilegia oxysepala HOM05D006652 ORTHO05D008645 1.7e-133 480.3 438 58.4
Sabra19G0100100 Salix brachista HOM05D006652 ORTHO05D008645 2.9e-133 479.6 463 56.2
Potri.019G089700 Populus trichocarpa HOM05D006652 ORTHO05D008645 5.0e-133 478.8 463 56.6
Nn1g04382 Nelumbo nucifera HOM05D006652 ORTHO05D008645 6.5e-133 478.4 467 55.5
Sabra19G0103300 Salix brachista HOM05D006652 ORTHO05D008645 1.1e-132 477.6 463 55.7
Lsat_1_v5_gn_8_140221 Lactuca sativa HOM05D006652 ORTHO05D008645 1.5e-132 477.2 442 58.8
Dinv08786 Davidia involucrata HOM05D006652 ORTHO05D008645 7.2e-132 474.9 489 54.8
Medtr4g079750 Medicago truncatula HOM05D006652 ORTHO05D008645 2.1e-131 473.4 439 57.2
HanXRQChr17g0558041 Helianthus annuus HOM05D006652 ORTHO05D008645 2.7e-131 473.0 480 54.4
Lj3g0009013 Lotus japonicus HOM05D006652 ORTHO05D008645 1.0e-130 471.1 444 57.0
Ca_18890_v3 Cicer arietinum L. HOM05D006652 ORTHO05D008645 2.3e-130 469.9 484 54.3
EL10Ac9g20915 Beta vulgaris HOM05D006652 ORTHO05D008645 4.0e-130 469.2 436 57.6
AUR62038922 Chenopodium quinoa HOM05D006652 ORTHO05D008645 5.2e-130 468.8 436 56.9
arahy.Tifrunner.gnm1.ann1.KP1SVS Arachis hypogaea HOM05D006652 ORTHO05D008645 7.5e-129 464.9 469 55.9
CiPaw.03G187000 Carya illinoinensis HOM05D006652 ORTHO05D008645 8.3e-128 461.5 475 54.3
arahy.Tifrunner.gnm1.ann1.5ZDL5Q Arachis hypogaea HOM05D006652 ORTHO05D008645 1.1e-127 461.1 452 56.6
Hund07829 Selenicereus undatus HOM05D006652 ORTHO05D008645 1.8e-127 460.3 483 53.6
Lalb_Chr19g0134921 Lupinus albus HOM05D006652 ORTHO05D008645 3.1e-127 459.5 477 53.0
Phvul.011G134400 Phaseolus vulgaris HOM05D006652 ORTHO05D008645 1.2e-126 457.6 473 53.7
Glyma.12G122700 Glycine max HOM05D006652 ORTHO05D008645 1.6e-126 457.2 460 53.9
ECA234G1589 Erigeron canadensis HOM05D006652 ORTHO05D008645 4.5e-126 455.7 440 55.7
Glyma.06G283400 Glycine max HOM05D006652 ORTHO05D008645 5.9e-126 455.3 460 53.9
Gohir.A10G153800 Gossypium hirsutum HOM05D006652 ORTHO05D008645 6.6e-125 451.8 440 55.9
VMungo1127G0176 Vigna mungo HOM05D006652 ORTHO05D008645 6.6e-125 451.8 436 55.3
PGSC0003DMG400010544 Solanum tuberosum HOM05D006652 ORTHO05D008645 8.6e-125 451.4 503 52.1
Gohir.D10G112300 Gossypium hirsutum HOM05D006652 ORTHO05D008645 1.9e-124 450.3 440 55.7
Gorai.011G124200 Gossypium raimondii HOM05D006652 ORTHO05D008645 1.9e-124 450.3 440 55.7
Atru.chr6.2810_Atru.chr6.2811 Acer truncatum HOM05D006652 ORTHO05D008645 3.3e-124 449.5 438 55.9
Os10g0181600 Oryza sativa ssp. japonica HOM05D006652 ORTHO05D008645 7.3e-124 448.4 452 53.8
Thecc.01G148700 Theobroma cacao HOM05D006652 ORTHO05D008645 1.6e-123 447.2 440 54.8
Ciclev10015734m.g Citrus clementina HOM05D006652 ORTHO05D008645 2.3e-122 443.4 438 55.7
ATR0661G163 Amborella trichopoda HOM05D006652 ORTHO05D008645 1.5e-121 440.7 463 51.2
Eucgr.K01102 Eucalyptus grandis HOM05D006652 ORTHO05D008645 2.6e-121 439.9 455 51.6
Glyma.06G283600 Glycine max HOM05D006652 ORTHO05D008645 4.4e-121 439.1 477 51.2
Zm00001eb223890 Zea mays HOM05D006652 ORTHO05D008645 5.7e-121 438.7 435 54.7
COL.COLO4_33547 Corchorus olitorius HOM05D006652 ORTHO05D008645 1.7e-120 437.2 436 54.6
CsaV3_6G018460 Cucumis sativus L. HOM05D006652 ORTHO05D008645 1.7e-117 427.2 464 51.1
Duzib187G0644 Durio zibethinus HOM05D006652 ORTHO05D008645 3.9e-117 426.0 448 52.2
PGR142G2816 Punica granatum HOM05D006652 ORTHO05D008645 1.9e-116 423.7 438 51.8
Cc05_g08190 Coffea canephora HOM05D006652 ORTHO05D008645 3.1e-114 416.4 404 55.4
MBI11_g14404_MAGBIO Magnolia biondii HOM05D006652 ORTHO05D008645 1.5e-113 414.1 464 52.2
Cc05_g08160 Coffea canephora HOM05D006652 ORTHO05D008645 2.2e-112 410.2 421 53.4
Actinidia39342 Actinidia chinensis HOM05D006652 ORTHO05D008645 1.9e-111 407.1 393 57.0
TWI59G0297 Tripterygium wilfordii HOM05D006652 ORTHO05D008645 5.8e-105 385.6 423 52.0
Psat7g166280 Pisum sativum HOM05D006652 ORTHO05D008645 2.4e-103 380.2 505 45.9
Rhsim04G0074100 Rhododendron simsii HOM05D006652 ORTHO05D008645 9.2e-103 378.3 444 49.8
Manes.13G137800 Manihot esculenta HOM05D006652 ORTHO05D008645 2.1e-102 377.1 386 52.3
AUR62038997 Chenopodium quinoa HOM05D006652 ORTHO05D008645 3.9e-101 372.9 448 48.7
Sed0018596 Sechium edule HOM05D006652 ORTHO05D008645 1.1e-95 354.8 393 48.9
Pp3c3_7460 Physcomitrium patens HOM05D006652 ORTHO05D008645 7.1e-95 352.1 438 44.5
SMO334G0043 Selaginella moellendorffii HOM05D006652 ORTHO05D008645 9.2e-95 351.7 443 44.5
CDE11G0921 Ceratophyllum demersum HOM05D006652 ORTHO05D008645 9.6e-92 341.7 381 49.1
Glyma.06G283500 Glycine max HOM05D006652 ORTHO05D008645 3.6e-91 339.7 406 47.5
Cc00_g35820 Coffea canephora HOM05D006652 ORTHO05D008645 2.1e-86 323.9 217 73.7
Mapoly0061s0036 Marchantia polymorpha HOM05D006652 ORTHO05D008645 3.3e-84 316.6 442 39.1
DCAR_013062 Daucus carota HOM05D006652 ORTHO05D008645 1.4e-82 311.2 444 45.0
MBI11_g19676_MAGBIO Magnolia biondii HOM05D006652 ORTHO05D008645 7.6e-81 305.4 188 77.1
TPR.G21861 Trifolium pratense HOM05D006652 ORTHO05D008645 9.6e-76 288.5 184 75.0
ClCG02G017930 Citrullus lanatus HOM05D006652 ORTHO05D008645 3.6e-75 286.6 438 41.6
Ca_18889_v3 Cicer arietinum L. HOM05D006652 ORTHO05D008645 1.8e-74 284.3 191 73.8
MELO3C019759.2 Cucumis melo HOM05D006652 ORTHO05D008645 3.3e-68 263.5 175 72.6
CBR_g20425 Chara braunii HOM05D006652 ORTHO05D008645 8.7e-61 238.8 456 33.1
Zm00001eb307930 Zea mays HOM05D006652 ORTHO05D008645 1.3e-59 235.0 172 64.5
MCO11G400 Micromonas commoda HOM05D006652 ORTHO05D008645 8.2e-59 232.3 431 34.1
AagrBONN_evm.TU.Sc2ySwM_228.444 Anthoceros agrestis HOM05D006652 ORTHO05D008645 5.3e-58 229.6 349 40.4
PRCOL_00002204 Prasinoderma coloniale HOM05D006652 ORTHO05D008645 4.5e-57 226.5 441 34.5
CBR_g20426 Chara braunii HOM05D006652 ORTHO05D008645 6.7e-53 212.6 442 34.4
Zm00001eb202810 Zea mays HOM05D006652 ORTHO05D008645 7.7e-49 199.1 412 35.0
PGR142G0648 Punica granatum HOM05D006652 ORTHO05D008645 1.0e-48 198.7 172 58.1
Zm00001eb155780 Zea mays HOM05D006652 ORTHO05D008645 1.9e-47 194.5 365 36.2
Haze_13351 Corylus avellana HOM05D006652 ORTHO05D008645 1.2e-46 191.8 120 75.8
Zm00001eb127120 Zea mays HOM05D006652 ORTHO05D008645 3.0e-45 187.2 368 35.3
Mapoly0285s0004 Marchantia polymorpha HOM05D006652 ORTHO05D008645 3.3e-44 183.7 336 34.5
Cre03.g200350 Chlamydomonas reinhardtii HOM05D006652 ORTHO05D008645 6.3e-43 179.5 465 28.8
Ca_18891_v3 Cicer arietinum L. HOM05D006652 ORTHO05D008645 1.9e-39 167.9 146 61.6
Haze_13350 Corylus avellana HOM05D006652 ORTHO05D008645 1.9e-39 167.9 92 88.0
SMO118G0546 Selaginella moellendorffii HOM05D006652 ORTHO05D008645 9.4e-39 165.6 421 28.5
Pp3c17_23540 Physcomitrium patens HOM05D006652 ORTHO05D008645 1.4e-37 161.8 421 27.3
CBR_g34298 Chara braunii HOM05D006652 ORTHO05D008645 6.3e-35 152.9 433 28.9
Mapoly0050s0024 Marchantia polymorpha HOM05D006652 ORTHO05D008645 1.4e-34 151.8 437 26.5
ECA234G0151 Erigeron canadensis HOM05D006652 ORTHO05D008645 3.1e-34 150.6 102 69.6
arahy.Tifrunner.gnm1.ann1.MYHL2J Arachis hypogaea HOM05D006652 ORTHO05D008645 7.7e-33 146.0 257 38.1
Cre06.g259401 Chlamydomonas reinhardtii HOM05D006652 ORTHO05D008645 7.7e-33 146.0 423 26.7
SEGI_35274 Sequoiadendron giganteum HOM05D006652 ORTHO05D008645 6.5e-32 142.9 422 26.1
AUR62024835 Chenopodium quinoa HOM05D006652 ORTHO05D008645 8.5e-32 142.5 141 56.0
MCO08G076 Micromonas commoda HOM05D006652 ORTHO05D008645 1.4e-26 125.2 434 25.1
TPR.G21859 Trifolium pratense HOM05D006652 ORTHO05D008645 9.1e-26 122.5 124 52.4
Zm00001eb272210 Zea mays HOM05D006652 ORTHO05D008645 9.1e-26 122.5 172 43.6
PRCOL_00006996 Prasinoderma coloniale HOM05D006652 ORTHO05D008645 3.6e-22 110.5 427 24.4
Glyma.12G122501 Glycine max HOM05D006652 ORTHO05D008645 2.4e-18 97.8 72 63.9
Cc05_g08180 Coffea canephora HOM05D006652 ORTHO05D008645 1.2e-17 95.5 54 83.3
Cc05_g08150 Coffea canephora HOM05D006652 ORTHO05D008645 5.9e-17 93.2 54 81.5
TPR.G21704 Trifolium pratense HOM05D006652 ORTHO05D008645 1.3e-16 92.0 244 29.9
AagrBONN_evm.TU.Sc2ySwM_117.2543 Anthoceros agrestis HOM05D006652 ORTHO05D008645 2.9e-16 90.9 299 26.1
Ah.07g202300 Amaranthus hybridus HOM05D006652 ORTHO05D008645 2.6e-12 77.8 44 79.5
Zm00001eb048070 Zea mays HOM05D001272 ORTHO05D001099 5.7e-12 76.6 58 69.0
Ah.08g222620 Amaranthus hybridus HOM05D006652 ORTHO05D008645 4.9e-11 73.6 53 64.2
Haze_13352 Corylus avellana HOM05D006652 ORTHO05D008645 3.5e-09 67.4 130 36.9


User provided reference genes

Program Settings