Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold109G31082 Striga asiatica HOM05D006399 ORTHO05D007988 1.2e-149 533.1 260 100.0
SGA_v2.0_scaffold157G37365 Striga asiatica HOM05D006399 ORTHO05D007988 1.9e-14 84.0 96 58.3
Os01g0667550 Oryza sativa ssp. japonica HOM05D059606 ORTHO05D050142 1.1e-12 78.2 88 40.9
Migut.L01261 Erythranthe guttata HOM05D006399 ORTHO05D007988 9.8e-11 71.6 118 38.1
Sabra08G0067200 Salix brachista HOM05D006399 ORTHO05D007988 1.1e-09 68.2 46 65.2
MSTRG.719 Avicennia marina HOM05D006399 ORTHO05D007988 1.4e-09 67.8 44 68.2
Dinv07949 Davidia involucrata HOM05D006399 ORTHO05D007988 1.4e-09 67.8 77 46.8
Dinv34130 Davidia involucrata HOM05D006399 ORTHO05D007988 1.4e-09 67.8 77 46.8
CSS0033869 Camellia sinensis var. sinensis HOM05D006399 ORTHO05D007988 4.1e-09 66.2 66 47.0
Dinv34129 Davidia involucrata HOM05D006399 ORTHO05D007988 4.1e-09 66.2 79 45.6
Lj2g0004295 Lotus japonicus HOM05D006399 ORTHO05D007988 9.2e-09 65.1 81 42.0
Potri.008G089800 Populus trichocarpa HOM05D006399 ORTHO05D007988 9.2e-09 65.1 69 50.7
Actinidia17748 Actinidia chinensis HOM05D006399 ORTHO05D007988 1.2e-08 64.7 45 62.2
Cfa008945 Carpinus fangiana HOM05D006399 ORTHO05D007988 1.2e-08 64.7 46 63.0
unitig_699.g19915 Utricularia gibba HOM05D006399 ORTHO05D007988 1.2e-08 64.7 115 36.5
QL03p069077 Quercus lobata HOM05D006399 ORTHO05D007988 1.6e-08 64.3 46 60.9
QL93p1999_0143 Quercus lobata HOM05D006399 ORTHO05D007988 1.6e-08 64.3 46 60.9
ATR0564G327 Amborella trichopoda HOM05D006399 ORTHO05D007988 2.1e-08 63.9 63 46.0
Lalb_Chr04g0255911 Lupinus albus HOM05D006399 ORTHO05D007988 2.7e-08 63.5 99 40.4
PSO210G1214 Papaver somniferum HOM05D006399 ORTHO05D007988 2.7e-08 63.5 41 65.9
CSS0044828 Camellia sinensis var. sinensis HOM05D006399 ORTHO05D007988 3.5e-08 63.2 89 42.7
Manes.01G033900 Manihot esculenta HOM05D006399 ORTHO05D007988 3.5e-08 63.2 46 60.9
GSVIVG01005154001 Vitis vinifera HOM05D006399 ORTHO05D007988 3.5e-08 63.2 59 50.8
Haze_11971 Corylus avellana HOM05D006399 ORTHO05D007988 4.6e-08 62.8 46 60.9
Eucgr.G02484 Eucalyptus grandis HOM05D006399 ORTHO05D007988 4.6e-08 62.8 46 58.7
FAN07G1460 Fragaria x ananassa HOM05D006399 ORTHO05D007988 4.6e-08 62.8 45 62.2
FAN22G2397 Fragaria x ananassa HOM05D006399 ORTHO05D007988 4.6e-08 62.8 45 62.2
GSVIVG01005153001 Vitis vinifera HOM05D006399 ORTHO05D007988 4.6e-08 62.8 38 65.8
Cfa008944 Carpinus fangiana HOM05D006399 ORTHO05D007988 6.0e-08 62.4 40 65.0
CiPaw.06G087600 Carya illinoinensis HOM05D006399 ORTHO05D007988 6.0e-08 62.4 46 58.7
Cc00_g16610 Coffea canephora HOM05D006399 ORTHO05D007988 6.0e-08 62.4 59 54.2
COL.COLO4_27992 Corchorus olitorius HOM05D006399 ORTHO05D007988 6.0e-08 62.4 140 34.3
Haze_11970 Corylus avellana HOM05D006399 ORTHO05D007988 6.0e-08 62.4 40 65.0
Eucgr.B03205 Eucalyptus grandis HOM05D006399 ORTHO05D007988 6.0e-08 62.4 99 39.4
Psat2g116280 Pisum sativum HOM05D006399 ORTHO05D007988 6.0e-08 62.4 41 65.9
CiPaw.05G130800 Carya illinoinensis HOM05D006399 ORTHO05D007988 7.8e-08 62.0 99 35.4
Oeu005762.1 Olea europaea HOM05D006399 ORTHO05D007988 7.8e-08 62.0 112 36.6
DCAR_007171 Daucus carota HOM05D006399 ORTHO05D007988 1.0e-07 61.6 79 44.3
Glyma.02G110300 Glycine max HOM05D006399 ORTHO05D007988 1.0e-07 61.6 38 65.8
Gorai.013G088500 Gossypium raimondii HOM05D006399 ORTHO05D007988 1.0e-07 61.6 73 49.3
Lsat_1_v5_gn_3_51980 Lactuca sativa HOM05D006399 ORTHO05D007988 1.3e-07 61.2 45 57.8
Nitab4.5_0004661g0030 Nicotiana tabacum HOM05D006399 ORTHO05D007988 1.3e-07 61.2 47 55.3
RcHm_v2.0_Chr4g0439361 Rosa chinensis HOM05D006399 ORTHO05D007988 1.3e-07 61.2 46 60.9
FvH4_4g30990 Fragaria vesca HOM05D006399 ORTHO05D007988 1.7e-07 60.8 46 60.9
FAN07G2088 Fragaria x ananassa HOM05D006399 ORTHO05D007988 1.7e-07 60.8 46 60.9
FAN12G2051 Fragaria x ananassa HOM05D006399 ORTHO05D007988 1.7e-07 60.8 46 60.9
Nitab4.5_0000145g0020 Nicotiana tabacum HOM05D006399 ORTHO05D007988 1.7e-07 60.8 47 55.3
Rhsim12G0079500 Rhododendron simsii HOM05D006399 ORTHO05D007988 1.7e-07 60.8 79 44.3
Atru.chr11.1740 Acer truncatum HOM05D006399 ORTHO05D007988 2.3e-07 60.5 40 62.5
Actinidia31971 Actinidia chinensis HOM05D006399 ORTHO05D007988 2.3e-07 60.5 45 55.6
Glyma.01G052300 Glycine max HOM05D006399 ORTHO05D007988 2.3e-07 60.5 38 63.2
Phvul.003G046500 Phaseolus vulgaris HOM05D006399 ORTHO05D007988 2.3e-07 60.5 38 63.2
QL12p039367 Quercus lobata HOM05D006399 ORTHO05D007988 2.3e-07 60.5 62 48.4
VMungo1215G0113 Vigna mungo HOM05D006399 ORTHO05D007988 2.3e-07 60.5 38 63.2
CiPaw.05G130700 Carya illinoinensis HOM05D006399 ORTHO05D007988 3.0e-07 60.1 72 47.2
CDE06G2322 Ceratophyllum demersum HOM05D006399 ORTHO05D007988 3.0e-07 60.1 65 46.2
Medtr5g042100 Medicago truncatula HOM05D006399 ORTHO05D007988 3.0e-07 60.1 41 65.9
PGR102G0590 Punica granatum HOM05D006399 ORTHO05D007988 3.0e-07 60.1 59 49.2
Duzib248G1019 Durio zibethinus HOM05D006399 ORTHO05D007988 3.9e-07 59.7 39 66.7
FAN22G0994 Fragaria x ananassa HOM05D006399 ORTHO05D007988 3.9e-07 59.7 69 49.3
RcHm_v2.0_Chr4g0439341 Rosa chinensis HOM05D006399 ORTHO05D007988 3.9e-07 59.7 45 57.8
Sp1g22040 Schrenkiella parvula HOM05D006399 ORTHO05D007988 3.9e-07 59.7 75 45.3
PGR102G2002 Punica granatum HOM05D006399 ORTHO05D007988 5.0e-07 59.3 41 63.4
FAN12G0639 Fragaria x ananassa HOM05D006399 ORTHO05D007988 6.6e-07 58.9 38 63.2
Gohir.D13G077400 Gossypium hirsutum HOM05D006399 ORTHO05D007988 6.6e-07 58.9 79 44.3
Prupe.1G278300 Prunus persica HOM05D006399 ORTHO05D007988 6.6e-07 58.9 75 44.0
Sopen05g003560 Solanum pennellii HOM05D006399 ORTHO05D007988 6.6e-07 58.9 41 58.5
Thecc.02G341500 Theobroma cacao HOM05D006399 ORTHO05D007988 6.6e-07 58.9 129 38.8
MD16G1068900 Malus domestica HOM05D006399 ORTHO05D007988 8.6e-07 58.5 74 41.9
TPR.G34705 Trifolium pratense HOM05D006399 ORTHO05D007988 1.1e-06 58.2 40 65.0
HanXRQChr15g0476901 Helianthus annuus HOM05D006399 ORTHO05D007988 1.5e-06 57.8 78 38.5
TAR622G1196 Trochodendron aralioides HOM05D006399 ORTHO05D007988 1.5e-06 57.8 89 39.3
Solyc05g007680.1 Solanum lycopersicum HOM05D006399 ORTHO05D007988 1.9e-06 57.4 78 41.0
PGSC0003DMG400018440 Solanum tuberosum HOM05D006399 ORTHO05D007988 1.9e-06 57.4 41 58.5
CAN.G1335.8 Capsicum annuum HOM05D006399 ORTHO05D007988 2.5e-06 57.0 49 53.1
Ca_04827_v3 Cicer arietinum L. HOM05D006399 ORTHO05D007988 2.5e-06 57.0 42 64.3
Peaxi162Scf00222g00816 Petunia axillaris HOM05D006399 ORTHO05D007988 2.5e-06 57.0 94 35.1
Ciclev10032022m.g Citrus clementina HOM05D006399 ORTHO05D007988 3.3e-06 56.6 85 40.0
FvH4_4g30980 Fragaria vesca HOM05D006399 ORTHO05D007988 3.3e-06 56.6 71 45.1
Atru.chr11.1742 Acer truncatum HOM05D006399 ORTHO05D007988 4.3e-06 56.2 46 54.3
BraA09t39516Z Brassica rapa HOM05D006399 ORTHO05D007988 4.3e-06 56.2 94 39.4
ECA246G3166 Erigeron canadensis HOM05D006399 ORTHO05D007988 5.6e-06 55.8 37 56.8
Ah.02g129470 Amaranthus hybridus HOM05D006399 ORTHO05D007988 7.3e-06 55.5 75 40.0
EL10Ac6g13248 Beta vulgaris HOM05D006399 ORTHO05D007988 7.3e-06 55.5 68 42.6
Cpa.g.sc1.57 Carica papaya HOM05D006399 ORTHO05D007988 9.5e-06 55.1 79 40.5


User provided reference genes

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