Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold109G31074 Striga asiatica HOM05D007419 ORTHO05D009327 0.0e+00 2145.5 1076 100.0
Migut.K00424 Erythranthe guttata HOM05D007419 ORTHO05D009327 0.0e+00 1247.3 1084 61.5
SalBow1G7934 Salvia bowleyana HOM05D007419 ORTHO05D009327 0.0e+00 1121.3 1154 54.2
PGSC0003DMG400030908 Solanum tuberosum HOM05D007419 ORTHO05D009327 1.4e-252 877.1 1117 45.5
QL09p047694 Quercus lobata HOM05D007419 ORTHO05D009327 1.5e-251 873.6 1125 45.0
Lj7A626G73 Lonicera japonica HOM05D007419 ORTHO05D009327 5.0e-250 868.6 1185 44.6
Cfa003423 Carpinus fangiana HOM05D007419 ORTHO05D009327 1.1e-249 867.5 1137 45.1
Sopen07g003800 Solanum pennellii HOM05D007419 ORTHO05D009327 1.4e-249 867.1 1111 44.7
Cc06_g08060 Coffea canephora HOM05D007419 ORTHO05D009327 3.2e-249 865.9 1125 45.1
Nitab4.5_0003393g0060 Nicotiana tabacum HOM05D007419 ORTHO05D009327 3.2e-249 865.9 1109 44.5
Peaxi162Scf00088g01333 Petunia axillaris HOM05D007419 ORTHO05D009327 2.1e-248 863.2 1102 44.4
TAR636G1395 Trochodendron aralioides HOM05D007419 ORTHO05D009327 4.1e-244 849.0 1144 44.8
Solyc07g007920.3 Solanum lycopersicum HOM05D007419 ORTHO05D009327 6.9e-244 848.2 1107 44.2
Haze_25509 Corylus avellana HOM05D007419 ORTHO05D009327 3.2e-241 839.3 1220 42.1
Potri.018G126300 Populus trichocarpa HOM05D007419 ORTHO05D009327 6.1e-240 835.1 1118 44.2
COL.COLO4_35160 Corchorus olitorius HOM05D007419 ORTHO05D009327 9.7e-238 827.8 1137 43.3
Gorai.013G235200 Gossypium raimondii HOM05D007419 ORTHO05D009327 3.7e-237 825.9 1128 44.2
DCAR_014901 Daucus carota HOM05D007419 ORTHO05D009327 4.5e-235 818.9 1144 43.3
Sabra18G0107200 Salix brachista HOM05D007419 ORTHO05D009327 2.1e-232 810.1 1118 43.8
Thecc.09G132300 Theobroma cacao HOM05D007419 ORTHO05D009327 1.4e-231 807.4 1136 43.1
Dinv41474 Davidia involucrata HOM05D003622 ORTHO05D004453 1.7e-229 800.4 1116 44.1
MD15G1166600 Malus domestica HOM05D007419 ORTHO05D009327 2.4e-228 796.6 1132 42.3
Glyma.17G111300 Glycine max HOM05D007419 ORTHO05D009327 5.0e-226 788.9 1124 41.5
Rhsim01G0061500 Rhododendron simsii HOM05D007419 ORTHO05D009327 7.2e-225 785.0 1232 41.2
Medtr4g115340 Medicago truncatula HOM05D007419 ORTHO05D009327 8.0e-224 781.6 1125 41.3
Phvul.003G168900 Phaseolus vulgaris HOM05D007419 ORTHO05D009327 2.0e-222 776.9 1119 40.5
HanXRQChr12g0356641 Helianthus annuus HOM05D007419 ORTHO05D009327 5.7e-222 775.4 1095 42.6
ECA234G0484 Erigeron canadensis HOM05D007419 ORTHO05D009327 2.2e-221 773.5 1088 42.4
Nitab4.5_0002008g0040 Nicotiana tabacum HOM05D007419 ORTHO05D009327 3.7e-221 772.7 1106 41.5
TPR.G24826 Trifolium pratense HOM05D007419 ORTHO05D009327 4.8e-221 772.3 1114 40.8
Lj4g0016099 Lotus japonicus HOM05D007419 ORTHO05D009327 6.3e-221 771.9 1127 41.1
FvH4_1g02590 Fragaria vesca HOM05D007419 ORTHO05D009327 1.8e-220 770.4 1121 42.0
arahy.Tifrunner.gnm1.ann1.XRJX6H Arachis hypogaea HOM05D007419 ORTHO05D009327 2.4e-220 770.0 1135 40.9
RcHm_v2.0_Chr2g0087621 Rosa chinensis HOM05D007419 ORTHO05D009327 2.4e-220 770.0 1124 41.9
FAN19G0754 Fragaria x ananassa HOM05D007419 ORTHO05D009327 3.1e-220 769.6 1114 42.3
Ca_06942_v3 Cicer arietinum L. HOM05D007419 ORTHO05D009327 2.7e-219 766.5 1114 41.2
Lsat_1_v5_gn_5_91781 Lactuca sativa HOM05D007419 ORTHO05D009327 1.3e-218 764.2 1104 41.7
VMungo1215G0197 Vigna mungo HOM05D007419 ORTHO05D009327 1.5e-217 760.8 1119 40.5
FAN26G2390 Fragaria x ananassa HOM05D007419 ORTHO05D009327 1.9e-217 760.4 1118 41.9
FAN28G1883 Fragaria x ananassa HOM05D007419 ORTHO05D009327 4.7e-216 755.7 1121 41.3
arahy.Tifrunner.gnm1.ann1.SLI0XQ Arachis hypogaea HOM05D007419 ORTHO05D009327 1.8e-215 753.8 1136 40.5
Sed0020697 Sechium edule HOM05D007419 ORTHO05D009327 1.5e-214 750.7 1107 40.8
CANSAT11G1590 Cannabis sativa HOM05D007419 ORTHO05D009327 3.7e-213 746.1 1137 40.2
Prupe.7G248700 Prunus persica HOM05D007419 ORTHO05D009327 1.1e-212 744.6 1137 40.5
Lalb_Chr13g0301571 Lupinus albus HOM05D007419 ORTHO05D009327 3.8e-210 736.1 1143 39.5
CAN.G1315.3 Capsicum annuum HOM05D007419 ORTHO05D009327 2.5e-209 733.4 982 42.9
Gohir.A13G200700 Gossypium hirsutum HOM05D007419 ORTHO05D009327 5.5e-209 732.3 1024 43.5
ClCG06G011500 Citrullus lanatus HOM05D007419 ORTHO05D009327 9.5e-209 731.5 1146 38.9
Aqoxy7G03635 Aquilegia oxysepala HOM05D007419 ORTHO05D009327 4.7e-208 729.2 1084 40.9
Atru.chr7.1950 Acer truncatum HOM05D007419 ORTHO05D009327 6.6e-202 708.8 965 44.1
MELO3C029461.2 Cucumis melo HOM05D007419 ORTHO05D009327 3.0e-199 699.9 1118 38.6
AUR62013308 Chenopodium quinoa HOM05D007419 ORTHO05D009327 7.5e-198 695.3 1137 38.4
Ah.09g224820 Amaranthus hybridus HOM05D007419 ORTHO05D009327 2.3e-191 673.7 1151 37.2
CsaV3_1G026730 Cucumis sativus L. HOM05D007419 ORTHO05D009327 9.2e-188 661.8 1138 37.7
Duzib168G0167 Durio zibethinus HOM05D007419 ORTHO05D009327 9.5e-185 651.7 1100 39.2
vmacro07721 Vaccinium macrocarpon HOM05D007419 ORTHO05D009327 2.7e-179 633.6 1005 39.5
GSVIVG01015591001 Vitis vinifera HOM05D007419 ORTHO05D009327 1.4e-175 621.3 838 43.3
Manes.06G047100 Manihot esculenta HOM05D007419 ORTHO05D009327 7.3e-161 572.4 806 43.4
Actinidia21952 Actinidia chinensis HOM05D007419 ORTHO05D009327 2.4e-156 557.4 833 42.0
TWI34G0413 Tripterygium wilfordii HOM05D007419 ORTHO05D009327 2.3e-154 550.8 940 38.6
Glyma.13G160200 Glycine max HOM05D007419 ORTHO05D009327 1.5e-153 548.1 1083 36.5
ATR0800G079 Amborella trichopoda HOM05D007419 ORTHO05D009327 5.8e-150 536.2 1018 35.2
Psat4g039120 Pisum sativum HOM05D007419 ORTHO05D009327 8.4e-149 532.3 678 42.9
Sc08g0006270 Simmondsia chinensis HOM05D007419 ORTHO05D009327 8.2e-144 515.8 878 37.6
SEGI_05905 Sequoiadendron giganteum HOM05D007419 ORTHO05D009327 1.6e-139 501.5 1103 32.7
QL09p047989 Quercus lobata HOM05D007419 ORTHO05D009327 3.0e-138 497.3 906 35.5
FAN23G1807 Fragaria x ananassa HOM05D007419 ORTHO05D009327 3.4e-134 483.8 1079 34.0
Eucgr.C01385 Eucalyptus grandis HOM05D007419 ORTHO05D009327 1.0e-133 482.3 857 36.8
Nn8g39549 Nelumbo nucifera HOM05D007419 ORTHO05D009327 5.5e-132 476.5 858 38.0
SEGI_33879 Sequoiadendron giganteum HOM05D007419 ORTHO05D009327 1.1e-129 468.8 1221 30.1
Gohir.D13G206200 Gossypium hirsutum HOM05D007419 ORTHO05D009327 2.0e-129 468.0 668 42.4
QL09p047847 Quercus lobata HOM05D007419 ORTHO05D009327 2.0e-121 441.4 1104 32.9
Os06g0173000 Oryza sativa ssp. japonica HOM05D007419 ORTHO05D009327 1.1e-111 409.1 1081 29.0
MBI15_g15110_MAGBIO Magnolia biondii HOM05D007419 ORTHO05D009327 1.3e-101 375.6 857 33.4
Hund26535 Selenicereus undatus HOM05D007419 ORTHO05D009327 3.0e-90 337.8 414 47.1
MD15G1167400 Malus domestica HOM05D007419 ORTHO05D009327 1.6e-86 325.5 298 56.0
AUR62011176 Chenopodium quinoa HOM05D007419 ORTHO05D009327 7.3e-76 290.0 309 52.1
Oeu012224.2 Olea europaea HOM05D007419 ORTHO05D009327 3.4e-73 281.2 419 42.0
Zm00001eb375320 Zea mays HOM05D007419 ORTHO05D009327 1.4e-71 275.8 938 26.2
CAN.G778.5 Capsicum annuum HOM05D007419 ORTHO05D009327 4.3e-68 264.2 206 61.7
GSVIVG01015592001 Vitis vinifera HOM05D007419 ORTHO05D009327 6.0e-62 243.8 266 51.5
Psat4g039080 Pisum sativum HOM05D007419 ORTHO05D009327 1.6e-59 235.7 313 44.4
Gohir.D13G206300 Gossypium hirsutum HOM05D007419 ORTHO05D009327 8.1e-59 233.4 258 48.8
SMO340G0190 Selaginella moellendorffii HOM05D007419 ORTHO05D009327 8.4e-56 223.4 1076 24.3
CSS0048092 Camellia sinensis var. sinensis HOM05D007419 ORTHO05D009327 2.3e-53 215.3 213 55.9
Actinidia21951 Actinidia chinensis HOM05D007419 ORTHO05D009327 1.4e-50 206.1 253 47.8
TWI34G1676 Tripterygium wilfordii HOM05D007419 ORTHO05D009327 5.8e-49 200.7 219 52.5
MSTRG.26436 Avicennia marina HOM05D007419 ORTHO05D009327 2.5e-44 185.3 161 62.7
SEGI_04675 Sequoiadendron giganteum HOM05D007419 ORTHO05D009327 7.3e-44 183.7 426 29.3
QL09p046488 Quercus lobata HOM05D007419 ORTHO05D009327 2.6e-41 175.3 155 58.7
QL09p046563 Quercus lobata HOM05D007419 ORTHO05D009327 2.6e-41 175.3 155 58.7
Oeu038257.1 Olea europaea HOM05D007419 ORTHO05D009327 3.8e-40 171.4 223 47.1
QL09p046495 Quercus lobata HOM05D007419 ORTHO05D009327 3.2e-39 168.3 403 31.3
QL09p046570 Quercus lobata HOM05D007419 ORTHO05D009327 3.5e-38 164.9 398 31.2
CBR_g6680 Chara braunii HOM05D007419 ORTHO05D009327 2.5e-31 142.1 284 32.0
EL10Ac8g18720 Beta vulgaris HOM05D007419 ORTHO05D009327 5.7e-28 131.0 162 43.8
SEGI_28656 Sequoiadendron giganteum HOM05D007419 ORTHO05D009327 1.0e-24 120.2 789 21.7
Eucgr.C01386 Eucalyptus grandis HOM05D007419 ORTHO05D009327 1.2e-22 113.2 156 42.9
MD08G1122800 Malus domestica HOM05D007419 ORTHO05D009327 7.9e-22 110.5 85 61.2
Dinv10908 Davidia involucrata HOM05D007419 ORTHO05D009327 1.2e-17 96.7 97 55.7
Nn8g39545 Nelumbo nucifera HOM05D007419 ORTHO05D009327 1.8e-13 82.8 92 50.0


User provided reference genes

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