Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold1097G53840 Striga asiatica HOM05D005956 ORTHO05D007197 1.1e-62 243.0 121 100.0
SGA_v2.0_scaffold69G23343 Striga asiatica HOM05D005956 ORTHO05D007197 3.8e-50 201.4 110 90.9
SGA_v2.0_scaffold115G32115 Striga asiatica HOM05D005956 ORTHO05D007197 2.5e-41 172.2 92 92.4
SGA_v2.0_scaffold7G04178 Striga asiatica HOM05D006000 ORTHO05D007749 5.2e-39 164.5 91 89.0
MD17G1161200 Malus domestica HOM05D005956 ORTHO05D007197 1.2e-32 143.3 114 57.0
Sabra07G0001300 Salix brachista HOM05D005956 ORTHO05D007197 4.7e-32 141.4 115 57.4
CiPaw.01G207000 Carya illinoinensis HOM05D005956 ORTHO05D007197 4.0e-31 138.3 116 56.9
RcHm_v2.0_Chr2g0149071 Rosa chinensis HOM05D005956 ORTHO05D007197 8.9e-31 137.1 111 56.8
Duzib192G0068 Durio zibethinus HOM05D005956 ORTHO05D007197 1.2e-30 136.7 111 57.7
FvH4_6g36600 Fragaria vesca HOM05D005956 ORTHO05D007197 1.2e-30 136.7 114 56.1
Prupe.3G025200 Prunus persica HOM05D005956 ORTHO05D007197 2.0e-30 136.0 110 56.4
Atru.chr1.2600 Acer truncatum HOM05D005956 ORTHO05D007197 2.6e-30 135.6 108 57.4
Potri.007G001800 Populus trichocarpa HOM05D005956 ORTHO05D007197 4.4e-30 134.8 111 59.5
Gohir.D06G117400 Gossypium hirsutum HOM05D005956 ORTHO05D007197 5.7e-30 134.4 100 60.0
Gorai.010G135000 Gossypium raimondii HOM05D005956 ORTHO05D007197 5.7e-30 134.4 100 60.0
unitig_578.g15928 Utricularia gibba HOM05D005956 ORTHO05D007197 5.7e-30 134.4 105 58.1
QL07p046118 Quercus lobata HOM05D005956 ORTHO05D007197 9.8e-30 133.7 108 59.3
Nitab4.5_0000499g0110 Nicotiana tabacum HOM05D005956 ORTHO05D007197 1.7e-29 132.9 110 59.1
PGR083G0114 Punica granatum HOM05D005956 ORTHO05D007197 4.9e-29 131.3 116 56.0
Hund05666 Selenicereus undatus HOM05D005956 ORTHO05D007197 4.9e-29 131.3 107 57.0
Cfa003426 Carpinus fangiana HOM05D005956 ORTHO05D007197 1.1e-28 130.2 112 55.4
CAN.G790.4 Capsicum annuum HOM05D005956 ORTHO05D007197 1.4e-28 129.8 104 60.6
CANSAT01G3224 Cannabis sativa HOM05D005956 ORTHO05D007197 3.2e-28 128.6 108 54.6
TWI12G1352 Tripterygium wilfordii HOM05D005956 ORTHO05D007197 9.2e-28 127.1 114 53.5
Actinidia24382 Actinidia chinensis HOM05D005956 ORTHO05D007197 1.2e-27 126.7 116 51.7
Actinidia21896 Actinidia chinensis HOM05D005956 ORTHO05D007197 2.7e-27 125.6 114 51.8
Manes.14G006900 Manihot esculenta HOM05D005956 ORTHO05D007197 2.7e-27 125.6 103 57.3
Ciclev10013933m.g Citrus clementina HOM05D005956 ORTHO05D007197 3.5e-27 125.2 102 56.9
Atru.chr1.2601 Acer truncatum HOM05D005956 ORTHO05D007197 4.6e-27 124.8 108 55.6
Sopen03g041770 Solanum pennellii HOM05D005956 ORTHO05D007197 5.9e-27 124.4 98 61.2
Migut.D02038 Erythranthe guttata HOM05D005956 ORTHO05D007197 1.0e-26 123.6 88 65.9
Nitab4.5_0005679g0030 Nicotiana tabacum HOM05D005956 ORTHO05D007197 1.3e-26 123.2 90 65.6
Sed0023146 Sechium edule HOM05D005956 ORTHO05D007197 3.3e-25 118.6 111 51.4
Eucgr.J03191 Eucalyptus grandis HOM05D005956 ORTHO05D007197 4.3e-25 118.2 105 56.2
AUR62000122 Chenopodium quinoa HOM05D005956 ORTHO05D007197 1.2e-24 116.7 107 46.7
AUR62019303 Chenopodium quinoa HOM05D005956 ORTHO05D007197 1.2e-24 116.7 107 46.7
MELO3C020528.2 Cucumis melo HOM05D005956 ORTHO05D007197 1.2e-24 116.7 114 49.1
PSO170G2336 Papaver somniferum HOM05D005956 ORTHO05D007197 4.7e-24 114.8 91 58.2
CSS0010876 Camellia sinensis var. sinensis HOM05D005956 ORTHO05D007197 6.2e-24 114.4 90 61.1
PGSC0003DMG400009194 Solanum tuberosum HOM05D005956 ORTHO05D007197 6.2e-24 114.4 92 60.9
ClCG03G000530 Citrullus lanatus HOM05D005956 ORTHO05D007197 8.0e-24 114.0 102 52.0
Thecc.06G054100 Theobroma cacao HOM05D005956 ORTHO05D007197 1.0e-23 113.6 85 61.2
VMungo1080G0145 Vigna mungo HOM05D005956 ORTHO05D007197 1.0e-23 113.6 110 47.3
Phvul.005G185600 Phaseolus vulgaris HOM05D005956 ORTHO05D007197 1.4e-23 113.2 101 49.5
HPP92_000245 Vanilla planifolia HOM05D005956 ORTHO05D007197 1.4e-23 113.2 103 49.5
Cc07_g21430 Coffea canephora HOM05D005956 ORTHO05D007197 1.8e-23 112.8 87 58.6
GSVIVG01029533001 Vitis vinifera HOM05D005956 ORTHO05D007197 6.8e-23 110.9 83 61.4
FAN09G1770 Fragaria x ananassa HOM05D005956 ORTHO05D007197 8.9e-23 110.5 94 53.2
CsaV3_1G036410 Cucumis sativus L. HOM05D005956 ORTHO05D007197 2.0e-22 109.4 106 50.9
TAR636G0827 Trochodendron aralioides HOM05D005956 ORTHO05D007197 2.0e-22 109.4 79 63.3
FAN02G1317 Fragaria x ananassa HOM05D005956 ORTHO05D007197 2.6e-22 109.0 94 53.2
FAN14G1696 Fragaria x ananassa HOM05D005956 ORTHO05D007197 2.6e-22 109.0 94 52.1
Rhsim08G0251500 Rhododendron simsii HOM05D005956 ORTHO05D007197 5.8e-22 107.8 88 59.1
arahy.Tifrunner.gnm1.ann1.XHCR8J Arachis hypogaea HOM05D005956 ORTHO05D007197 9.8e-22 107.1 110 45.5
Cpa.g.sc176.24 Carica papaya HOM05D005956 ORTHO05D007197 2.2e-21 105.9 91 48.4
vmacro18734 Vaccinium macrocarpon HOM05D005956 ORTHO05D007197 4.9e-21 104.8 83 59.0
arahy.Tifrunner.gnm1.ann1.03KM4I Arachis hypogaea HOM05D005956 ORTHO05D007197 6.4e-21 104.4 110 45.5
arahy.Tifrunner.gnm1.ann1.12WCBU Arachis hypogaea HOM05D005956 ORTHO05D007197 8.3e-21 104.0 110 43.6
Peaxi162Scf00038g02615 Petunia axillaris HOM05D005956 ORTHO05D007197 1.9e-20 102.8 87 54.0
PSO063G0021 Papaver somniferum HOM05D005956 ORTHO05D007197 3.2e-20 102.1 79 59.5
Carub.0002s2578 Capsella rubella HOM05D005956 ORTHO05D007197 1.2e-19 100.1 96 44.8
EL10Ac7g17213 Beta vulgaris HOM05D005956 ORTHO05D007197 7.8e-19 97.4 87 52.9
Nn2g12784 Nelumbo nucifera HOM05D005956 ORTHO05D007197 1.3e-18 96.7 118 45.8
Haze_16217 Corylus avellana HOM05D005956 ORTHO05D007197 5.0e-18 94.7 192 31.8
COL.COLO4_25126 Corchorus olitorius HOM05D005956 ORTHO05D007197 8.6e-18 94.0 82 48.8
ATR0626G219 Amborella trichopoda HOM05D005956 ORTHO05D007197 1.9e-17 92.8 82 51.2
BraA07t31918Z Brassica rapa HOM05D000309 ORTHO05D007197 2.5e-17 92.4 101 41.6
Lsat_1_v5_gn_4_106240 Lactuca sativa HOM05D005956 ORTHO05D007197 3.3e-17 92.0 84 53.6
LjContig00482g0022414 Lotus japonicus HOM05D005956 ORTHO05D007197 1.2e-16 90.1 101 41.6
Aa31LG4G2050 Aethionema arabicum HOM05D005956 ORTHO05D007197 2.1e-16 89.4 88 45.5
CDE02G2643 Ceratophyllum demersum HOM05D005956 ORTHO05D007197 2.1e-16 89.4 110 40.0
Dinv08767 Davidia involucrata HOM05D005956 ORTHO05D007197 3.6e-16 88.6 67 61.2
Glyma.15G000800 Glycine max HOM05D005956 ORTHO05D007197 1.4e-15 86.7 86 45.3
Medtr6g003960 Medicago truncatula HOM05D005956 ORTHO05D007197 1.8e-15 86.3 79 46.8
DCAR_030820 Daucus carota HOM05D005956 ORTHO05D007197 3.1e-15 85.5 76 47.4
Sc05g0006980 Simmondsia chinensis HOM05D005956 ORTHO05D007197 1.5e-14 83.2 81 46.9
Oeu039938.1 Olea europaea HOM05D005956 ORTHO05D007197 2.0e-14 82.8 73 50.7
TPR.G21350 Trifolium pratense HOM05D005956 ORTHO05D007197 7.5e-14 80.9 78 44.9
Solyc03g124040.3 Solanum lycopersicum HOM05D005956 ORTHO05D007197 2.2e-13 79.3 110 40.9
HanXRQChr15g0497231 Helianthus annuus HOM05D005956 ORTHO05D007197 2.9e-13 79.0 80 45.0
Psat5g306040 Pisum sativum HOM05D005956 ORTHO05D007197 8.3e-13 77.4 73 41.1
MBI16_g00686_MAGBIO Magnolia biondii HOM05D005956 ORTHO05D007197 1.1e-12 77.0 79 48.1
Lalb_Chr24g0392721 Lupinus albus HOM05D005956 ORTHO05D007197 1.4e-12 76.6 79 39.2
Ca_00996_v3 Cicer arietinum L. HOM05D005956 ORTHO05D007197 9.2e-12 73.9 68 44.1
Ah.05g168390 Amaranthus hybridus HOM05D005956 ORTHO05D007197 1.6e-11 73.2 79 44.3
FvH4_4g20560 Fragaria vesca HOM05D005956 ORTHO05D007197 3.5e-11 72.0 56 58.9
Zm00001eb000010 Zea mays HOM05D005956 ORTHO05D007197 6.0e-11 71.2 77 41.6
SalBow8G3086 Salvia bowleyana HOM05D005956 ORTHO05D007197 3.0e-10 68.9 52 61.5
Lj7A719T46 Lonicera japonica HOM05D005956 ORTHO05D007197 3.9e-10 68.6 55 63.6
THA.LOC104812335 Tarenaya hassleriana HOM05D005956 ORTHO05D007197 9.5e-09 63.9 54 50.0
MD09G1167200 Malus domestica HOM05D005956 ORTHO05D007197 2.8e-08 62.4 48 52.1
arahy.Tifrunner.gnm1.ann1.X8CU4B Arachis hypogaea HOM05D005956 ORTHO05D007197 3.6e-08 62.0 71 42.3
Hma1.2p1_1111F.1_g258470 Hydrangea macrophylla HOM05D005956 ORTHO05D007197 6.2e-08 61.2 49 59.2
Sp5g33970 Schrenkiella parvula HOM05D005956 ORTHO05D007197 1.1e-07 60.5 53 50.9
arahy.Tifrunner.gnm1.ann1.DBZ4H1 Arachis hypogaea HOM05D005956 ORTHO05D007197 1.4e-07 60.1 63 46.0
BcaB03g16055 Brassica carinata HOM05D005956 ORTHO05D007197 1.4e-07 60.1 53 49.1
MBI16_g37212_MAGBIO Magnolia biondii HOM05D005956 ORTHO05D007197 1.8e-07 59.7 43 62.8
C06p52830 Brassica napus HOM05D000309 ORTHO05D007197 4.0e-07 58.5 53 47.2
arahy.Tifrunner.gnm1.ann1.X81K0T Arachis hypogaea HOM05D005956 ORTHO05D007197 6.8e-07 57.8 56 48.2
BcaC08g47440 Brassica carinata HOM05D005956 ORTHO05D007197 8.9e-07 57.4 49 49.0
A07p44100 Brassica napus HOM05D000309 ORTHO05D007197 8.9e-07 57.4 53 45.3
BolC6t40300H Brassica oleracea HOM05D000163 ORTHO05D000219 8.9e-07 57.4 49 49.0
Hma1.2p1_1111F.1_g258480 Hydrangea macrophylla HOM05D005956 ORTHO05D007197 1.2e-06 57.0 40 65.0
Psat0s410g0120 Pisum sativum HOM05D005956 ORTHO05D007197 9.9e-06 53.9 42 59.5


User provided reference genes

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