Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold108G30986 Striga asiatica HOM05D000935 ORTHO05D404338 2.9e-176 621.7 297 100.0
SGA_v2.0_scaffold98G29310 Striga asiatica HOM05D000935 ORTHO05D001483 5.2e-08 62.8 37 81.1
Migut.N01365 Erythranthe guttata HOM05D000935 ORTHO05D001483 1.2e-07 61.6 37 78.4
MSTRG.16962 Avicennia marina HOM05D000935 ORTHO05D001483 1.5e-07 61.2 61 55.7
SGA_v2.0_scaffold80G25810 Striga asiatica HOM05D000935 ORTHO05D001483 1.5e-07 61.2 37 78.4
SalBow5G1375 Salvia bowleyana HOM05D000935 ORTHO05D001483 3.4e-07 60.1 35 80.0
SalBow5G1863 Salvia bowleyana HOM05D000935 ORTHO05D001483 3.4e-07 60.1 35 80.0
SalBow5G4144 Salvia bowleyana HOM05D000935 ORTHO05D001483 3.4e-07 60.1 35 80.0
SalBow5G4560 Salvia bowleyana HOM05D000935 ORTHO05D001483 3.4e-07 60.1 35 80.0
THA.LOC104807413 Tarenaya hassleriana HOM05D000935 ORTHO05D001483 4.4e-07 59.7 37 75.7
Prupe.8G182300 Prunus persica HOM05D000935 ORTHO05D001483 5.8e-07 59.3 37 73.0
Sed0004823 Sechium edule HOM05D000935 ORTHO05D001483 5.8e-07 59.3 37 73.0
Actinidia17145 Actinidia chinensis HOM05D000935 ORTHO05D001483 7.5e-07 58.9 37 73.0
Actinidia28756 Actinidia chinensis HOM05D000935 ORTHO05D001483 7.5e-07 58.9 37 73.0
RcHm_v2.0_Chr6g0281321 Rosa chinensis HOM05D000935 ORTHO05D001483 7.5e-07 58.9 37 73.0
arahy.Tifrunner.gnm1.ann1.6CC1CL Arachis hypogaea HOM05D000935 ORTHO05D001483 9.8e-07 58.5 37 73.0
arahy.Tifrunner.gnm1.ann1.JEQD5V Arachis hypogaea HOM05D000935 ORTHO05D001483 9.8e-07 58.5 37 73.0
Ca_06143_v3 Cicer arietinum L. HOM05D000935 ORTHO05D001483 9.8e-07 58.5 37 73.0
ClCG02G010770 Citrullus lanatus HOM05D000935 ORTHO05D001483 9.8e-07 58.5 37 73.0
MELO3C013480.2 Cucumis melo HOM05D000935 ORTHO05D001483 9.8e-07 58.5 37 73.0
CsaV3_6G009990 Cucumis sativus L. HOM05D000935 ORTHO05D001483 9.8e-07 58.5 37 73.0
Dinv24756 Davidia involucrata HOM05D000935 ORTHO05D001483 9.8e-07 58.5 37 73.0
Dinv28296 Davidia involucrata HOM05D000935 ORTHO05D001483 9.8e-07 58.5 37 73.0
FvH4_2g17051 Fragaria vesca HOM05D000935 ORTHO05D001483 9.8e-07 58.5 37 73.0
FvH4_2g17060 Fragaria vesca HOM05D000935 ORTHO05D001483 9.8e-07 58.5 37 73.0
FvH4_2g17080 Fragaria vesca HOM05D000935 ORTHO05D001483 9.8e-07 58.5 37 73.0
FvH4_2g17090 Fragaria vesca HOM05D000935 ORTHO05D001483 9.8e-07 58.5 37 73.0
FAN15G1161 Fragaria x ananassa HOM05D000935 ORTHO05D001483 9.8e-07 58.5 37 73.0
FAN15G2089 Fragaria x ananassa HOM05D000935 ORTHO05D001483 9.8e-07 58.5 37 73.0
FAN15G3458 Fragaria x ananassa HOM05D000935 ORTHO05D001483 9.8e-07 58.5 37 73.0
FAN15G3729 Fragaria x ananassa HOM05D000935 ORTHO05D001483 9.8e-07 58.5 37 73.0
FAN24G0339 Fragaria x ananassa HOM05D000935 ORTHO05D001483 9.8e-07 58.5 37 73.0
FAN24G1114 Fragaria x ananassa HOM05D000935 ORTHO05D001483 9.8e-07 58.5 37 73.0
FAN24G1608 Fragaria x ananassa HOM05D000935 ORTHO05D001483 9.8e-07 58.5 37 73.0
FAN24G2213 Fragaria x ananassa HOM05D000935 ORTHO05D001483 9.8e-07 58.5 37 73.0
FAN24G2864 Fragaria x ananassa HOM05D000935 ORTHO05D001483 9.8e-07 58.5 37 73.0
FAN24G3083 Fragaria x ananassa HOM05D000935 ORTHO05D001483 9.8e-07 58.5 37 73.0
FAN27G1332 Fragaria x ananassa HOM05D000935 ORTHO05D001483 9.8e-07 58.5 37 73.0
FAN27G2510 Fragaria x ananassa HOM05D000935 ORTHO05D200528 9.8e-07 58.5 37 73.0
FAN27G3228 Fragaria x ananassa HOM05D000935 ORTHO05D001483 9.8e-07 58.5 37 73.0
Glyma.02G273100 Glycine max HOM05D000935 ORTHO05D001483 9.8e-07 58.5 37 73.0
Lj9A409T90 Lonicera japonica HOM05D000935 ORTHO05D001483 9.8e-07 58.5 37 73.0
MD05G1143500 Malus domestica HOM05D000935 ORTHO05D001483 9.8e-07 58.5 37 73.0
MD10G1143400 Malus domestica HOM05D000935 ORTHO05D001483 9.8e-07 58.5 37 73.0
Medtr5g087550 Medicago truncatula HOM05D000935 ORTHO05D001483 9.8e-07 58.5 37 73.0
Phvul.008G208900 Phaseolus vulgaris HOM05D000935 ORTHO05D001483 9.8e-07 58.5 37 73.0
RcHm_v2.0_Chr6g0281271 Rosa chinensis HOM05D000935 ORTHO05D001483 9.8e-07 58.5 37 73.0
RcHm_v2.0_Chr6g0281291 Rosa chinensis HOM05D000935 ORTHO05D001483 9.8e-07 58.5 37 73.0
RcHm_v2.0_Chr6g0281471 Rosa chinensis HOM05D000935 ORTHO05D001483 9.8e-07 58.5 37 73.0
RcHm_v2.0_Chr6g0281491 Rosa chinensis HOM05D000935 ORTHO05D001483 9.8e-07 58.5 37 73.0
Sed0017118 Sechium edule HOM05D000935 ORTHO05D001483 9.8e-07 58.5 37 73.0
TPR.G11710 Trifolium pratense HOM05D000935 ORTHO05D001483 9.8e-07 58.5 37 73.0
MSTRG.24907 Avicennia marina HOM05D000935 ORTHO05D001483 1.3e-06 58.2 37 73.0
CSS0019352 Camellia sinensis var. sinensis HOM05D000015 ORTHO05D000249 1.3e-06 58.2 38 68.4
CSS0038672 Camellia sinensis var. sinensis HOM05D000015 ORTHO05D000249 1.3e-06 58.2 38 68.4
Migut.C00353 Erythranthe guttata HOM05D000935 ORTHO05D001483 1.3e-06 58.2 37 70.3
CSS0003181 Camellia sinensis var. sinensis HOM05D000015 ORTHO05D000249 1.7e-06 57.8 38 65.8
CSS0029663 Camellia sinensis var. sinensis HOM05D000935 ORTHO05D001483 1.7e-06 57.8 37 70.3
LjContig00564g0010978 Lotus japonicus HOM05D000935 ORTHO05D001483 1.7e-06 57.8 37 70.3
THA.LOC104819699 Tarenaya hassleriana HOM05D000935 ORTHO05D001483 1.7e-06 57.8 37 73.0
Atru.chr5.3582 Acer truncatum HOM05D000935 ORTHO05D001483 2.2e-06 57.4 37 73.0
Glyma.14G045900 Glycine max HOM05D000935 ORTHO05D001483 2.2e-06 57.4 37 73.0
Manes.05G128600 Manihot esculenta HOM05D000935 ORTHO05D001483 2.2e-06 57.4 37 70.3
Oeu006115.1 Olea europaea HOM05D000935 ORTHO05D001483 2.2e-06 57.4 37 73.0
Oeu050938.1 Olea europaea HOM05D000935 ORTHO05D001483 2.2e-06 57.4 37 73.0
Psat0s3155g0040 Pisum sativum HOM05D000935 ORTHO05D001483 2.2e-06 57.4 37 70.3
Potri.004G208500 Populus trichocarpa HOM05D000935 ORTHO05D001483 2.2e-06 57.4 37 70.3
Sabra09G0131700 Salix brachista HOM05D000935 ORTHO05D001483 2.2e-06 57.4 37 70.3
SalBow1G2325 Salvia bowleyana HOM05D000935 ORTHO05D001483 2.2e-06 57.4 37 73.0
SalBow6G2538 Salvia bowleyana HOM05D000935 ORTHO05D001483 2.2e-06 57.4 37 70.3
SalBow7G0019 Salvia bowleyana HOM05D000935 ORTHO05D001483 2.2e-06 57.4 37 70.3
VMungo0647G1192 Vigna mungo HOM05D000935 ORTHO05D001483 2.2e-06 57.4 37 70.3
Aqoxy5G00960 Aquilegia oxysepala HOM05D000935 ORTHO05D001483 2.9e-06 57.0 37 70.3
MSTRG.24519 Avicennia marina HOM05D000935 ORTHO05D001483 2.9e-06 57.0 37 70.3
CSS0013904 Camellia sinensis var. sinensis HOM05D000935 ORTHO05D001483 2.9e-06 57.0 37 70.3
CSS0045944 Camellia sinensis var. sinensis HOM05D000935 ORTHO05D001483 2.9e-06 57.0 37 70.3
CANSAT25G1179 Cannabis sativa HOM05D000935 ORTHO05D001483 2.9e-06 57.0 37 70.3
CAN.G801.39 Capsicum annuum HOM05D000935 ORTHO05D001483 2.9e-06 57.0 37 67.6
CiPaw.05G095300 Carya illinoinensis HOM05D000935 ORTHO05D001483 2.9e-06 57.0 37 70.3
CiPaw.06G113700 Carya illinoinensis HOM05D000935 ORTHO05D001483 2.9e-06 57.0 37 70.3
CiPaw.06G113800 Carya illinoinensis HOM05D000935 ORTHO05D001483 2.9e-06 57.0 37 70.3
Ciclev10000761m.g Citrus clementina HOM05D000935 ORTHO05D001483 2.9e-06 57.0 37 70.3
Haze_03642 Corylus avellana HOM05D000935 ORTHO05D001483 2.9e-06 57.0 37 70.3
ECA232G4060 Erigeron canadensis HOM05D000935 ORTHO05D001483 2.9e-06 57.0 37 70.3
HanXRQChr09g0241951 Helianthus annuus HOM05D000935 ORTHO05D001483 2.9e-06 57.0 37 70.3
HanXRQChr16g0532181 Helianthus annuus HOM05D000935 ORTHO05D001483 2.9e-06 57.0 37 70.3
Hma1.2p1_0085F.1_g044340 Hydrangea macrophylla HOM05D000935 ORTHO05D001483 2.9e-06 57.0 37 70.3
Lsat_1_v5_gn_9_48281 Lactuca sativa HOM05D000935 ORTHO05D001483 2.9e-06 57.0 37 70.3
MD00G1059700 Malus domestica HOM05D000935 ORTHO05D012535 2.9e-06 57.0 37 70.3
MD10G1268900 Malus domestica HOM05D000935 ORTHO05D012535 2.9e-06 57.0 37 70.3
MD16G1201100 Malus domestica HOM05D000935 ORTHO05D012535 2.9e-06 57.0 37 70.3
Oeu035865.1 Olea europaea HOM05D000935 ORTHO05D001483 2.9e-06 57.0 37 70.3
Oeu042504.1 Olea europaea HOM05D000935 ORTHO05D001483 2.9e-06 57.0 37 70.3
Oeu043405.1 Olea europaea HOM05D000935 ORTHO05D001483 2.9e-06 57.0 37 70.3
Peaxi162Scf01393g00015 Petunia axillaris HOM05D000935 ORTHO05D001483 2.9e-06 57.0 37 67.6
Rhsim11G0198700 Rhododendron simsii HOM05D000935 ORTHO05D001483 2.9e-06 57.0 37 70.3
Solyc03g032020.4 Solanum lycopersicum HOM05D000935 ORTHO05D001483 2.9e-06 57.0 37 67.6
Sopen03g005860 Solanum pennellii HOM05D000935 ORTHO05D001483 2.9e-06 57.0 37 67.6
Sopen03g005870 Solanum pennellii HOM05D000935 ORTHO05D001483 2.9e-06 57.0 37 67.6
PGSC0003DMG400018679 Solanum tuberosum HOM05D000935 ORTHO05D001483 2.9e-06 57.0 37 67.6
SGA_v2.0_scaffold220G42633 Striga asiatica HOM05D000935 ORTHO05D001483 2.9e-06 57.0 37 70.3
SGA_v2.0_scaffold26G11229 Striga asiatica HOM05D000935 ORTHO05D001483 2.9e-06 57.0 37 73.0
TAR625G1359 Trochodendron aralioides HOM05D000935 ORTHO05D001483 2.9e-06 57.0 37 70.3
unitig_578.g16096 Utricularia gibba HOM05D000935 ORTHO05D001483 2.9e-06 57.0 37 70.3
vmacro02346 Vaccinium macrocarpon HOM05D000935 ORTHO05D001483 2.9e-06 57.0 37 70.3
vmacro18478 Vaccinium macrocarpon HOM05D000935 ORTHO05D001483 2.9e-06 57.0 37 70.3
GSVIVG01013435001 Vitis vinifera HOM05D000935 ORTHO05D001483 2.9e-06 57.0 37 70.3
GSVIVG01023852001 Vitis vinifera HOM05D000935 ORTHO05D001483 2.9e-06 57.0 37 70.3
MSTRG.1006 Avicennia marina HOM05D000935 ORTHO05D001483 3.7e-06 56.6 37 70.3
Dinv05493 Davidia involucrata HOM05D000935 ORTHO05D001483 3.7e-06 56.6 61 50.8
FvH4_2g17100 Fragaria vesca HOM05D000935 ORTHO05D001483 3.7e-06 56.6 37 70.3
FAN15G0180 Fragaria x ananassa HOM05D000935 ORTHO05D001483 3.7e-06 56.6 37 70.3
FAN27G2607 Fragaria x ananassa HOM05D000935 ORTHO05D001483 3.7e-06 56.6 37 70.3
Glyma.20G058000 Glycine max HOM05D000935 ORTHO05D001483 3.7e-06 56.6 37 70.3
Lalb_Chr10g0105831 Lupinus albus HOM05D000935 ORTHO05D001483 3.7e-06 56.6 37 67.6
Nn5g31056 Nelumbo nucifera HOM05D000935 ORTHO05D001483 3.7e-06 56.6 37 67.6
Phvul.L004337 Phaseolus vulgaris HOM05D000935 ORTHO05D001483 3.7e-06 56.6 37 70.3
RcHm_v2.0_Chr6g0281521 Rosa chinensis HOM05D000935 ORTHO05D001483 3.7e-06 56.6 37 70.3
TAR628G0537 Trochodendron aralioides HOM05D000935 ORTHO05D001483 3.7e-06 56.6 37 70.3
VMungo0540G0363 Vigna mungo HOM05D000935 ORTHO05D001483 3.7e-06 56.6 37 70.3
Actinidia15527 Actinidia chinensis HOM05D000935 ORTHO05D001483 4.9e-06 56.2 37 67.6
Haze_01954 Corylus avellana HOM05D000935 ORTHO05D001483 4.9e-06 56.2 37 67.6
ECA246G4607 Erigeron canadensis HOM05D000935 ORTHO05D001483 4.9e-06 56.2 37 70.3
Gohir.A03G169600 Gossypium hirsutum HOM05D000935 ORTHO05D001483 4.9e-06 56.2 37 70.3
Gohir.A03G169700 Gossypium hirsutum HOM05D000935 ORTHO05D001483 4.9e-06 56.2 37 70.3
Gohir.D02G192700 Gossypium hirsutum HOM05D000935 ORTHO05D001483 4.9e-06 56.2 37 70.3
Gohir.D02G192800 Gossypium hirsutum HOM05D000935 ORTHO05D001483 4.9e-06 56.2 37 70.3
Gohir.D02G192900 Gossypium hirsutum HOM05D000935 ORTHO05D001483 4.9e-06 56.2 37 70.3
Gohir.D02G193000 Gossypium hirsutum HOM05D000935 ORTHO05D001483 4.9e-06 56.2 37 70.3
Gorai.005G215500 Gossypium raimondii HOM05D000935 ORTHO05D001483 4.9e-06 56.2 37 70.3
Gorai.005G215600 Gossypium raimondii HOM05D000935 ORTHO05D001483 4.9e-06 56.2 37 70.3
Gorai.005G215800 Gossypium raimondii HOM05D000935 ORTHO05D001483 4.9e-06 56.2 37 70.3
HanXRQChr15g0484121 Helianthus annuus HOM05D000935 ORTHO05D001483 4.9e-06 56.2 37 70.3
Hma1.2p1_0810F.1_g222020 Hydrangea macrophylla HOM05D000935 ORTHO05D001483 4.9e-06 56.2 37 67.6
Lsat_1_v5_gn_3_69080 Lactuca sativa HOM05D000935 ORTHO05D001483 4.9e-06 56.2 37 70.3
Manes.03G096600 Manihot esculenta HOM05D000935 ORTHO05D001483 4.9e-06 56.2 37 67.6
Manes.15G114100 Manihot esculenta HOM05D000935 ORTHO05D001483 4.9e-06 56.2 37 67.6
PGR102G3229 Punica granatum HOM05D000935 ORTHO05D001483 4.9e-06 56.2 37 67.6
Hund00102 Selenicereus undatus HOM05D000935 ORTHO05D001483 4.9e-06 56.2 37 70.3
Thecc.02G148300 Theobroma cacao HOM05D000935 ORTHO05D001483 4.9e-06 56.2 37 70.3
MSTRG.22080 Avicennia marina HOM05D000935 ORTHO05D001483 6.4e-06 55.8 37 67.6
CAN.G1428.11 Capsicum annuum HOM05D000935 ORTHO05D001483 6.4e-06 55.8 37 67.6
Manes.01G157500 Manihot esculenta HOM05D000935 ORTHO05D001483 6.4e-06 55.8 37 67.6
Nitab4.5_0000235g0130 Nicotiana tabacum HOM05D000935 ORTHO05D001483 6.4e-06 55.8 37 67.6
Nitab4.5_0000855g0140 Nicotiana tabacum HOM05D000935 ORTHO05D001483 6.4e-06 55.8 37 67.6
Nitab4.5_0004448g0010 Nicotiana tabacum HOM05D000935 ORTHO05D001483 6.4e-06 55.8 37 67.6
Nitab4.5_0004529g0010 Nicotiana tabacum HOM05D000935 ORTHO05D001483 6.4e-06 55.8 37 67.6
Oeu045751.1 Olea europaea HOM05D000935 ORTHO05D001483 6.4e-06 55.8 37 67.6
PSO017G7132 Papaver somniferum HOM05D000935 ORTHO05D001483 6.4e-06 55.8 37 67.6
PSO170G5113 Papaver somniferum HOM05D000935 ORTHO05D001483 6.4e-06 55.8 37 67.6
Peaxi162Scf00861g00321 Petunia axillaris HOM05D000935 ORTHO05D001483 6.4e-06 55.8 37 67.6
Solyc02g038740.4 Solanum lycopersicum HOM05D000935 ORTHO05D001483 6.4e-06 55.8 37 67.6
Sopen02g012160 Solanum pennellii HOM05D000935 ORTHO05D001483 6.4e-06 55.8 37 67.6
Actinidia17081 Actinidia chinensis HOM05D000935 ORTHO05D001483 8.3e-06 55.5 37 67.6
Aa31LG8G14700 Aethionema arabicum HOM05D000935 ORTHO05D001483 8.3e-06 55.5 37 70.3
Lj5A170T102 Lonicera japonica HOM05D000935 ORTHO05D001483 8.3e-06 55.5 37 70.3
Oeu013576.1 Olea europaea HOM05D000935 ORTHO05D001483 8.3e-06 55.5 37 67.6
Potri.002G004000 Populus trichocarpa HOM05D000935 ORTHO05D001483 8.3e-06 55.5 37 67.6
Hund06350 Selenicereus undatus HOM05D000935 ORTHO05D001483 8.3e-06 55.5 37 70.3
SGA_v2.0_scaffold161G37870 Striga asiatica HOM05D000935 ORTHO05D001483 8.3e-06 55.5 37 70.3
TWI56G0932 Tripterygium wilfordii HOM05D000935 ORTHO05D001483 8.3e-06 55.5 37 67.6


User provided reference genes

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