Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold108G30962 Striga asiatica HOM05D006674 ORTHO05D007954 2.3e-239 832.0 484 100.0
Migut.H02229 Erythranthe guttata HOM05D006674 ORTHO05D007954 8.8e-114 414.8 551 55.7
Actinidia28801 Actinidia chinensis HOM05D006674 ORTHO05D007954 7.0e-87 325.5 558 47.1
Nn4g24371 Nelumbo nucifera HOM05D006674 ORTHO05D007954 2.0e-86 323.9 565 46.4
TWI77G1007 Tripterygium wilfordii HOM05D006674 ORTHO05D007954 5.0e-85 319.3 563 46.9
Eucgr.F02873 Eucalyptus grandis HOM05D006674 ORTHO05D007954 1.6e-83 314.3 529 48.4
Sc11g0004590 Simmondsia chinensis HOM05D006674 ORTHO05D007954 8.0e-83 312.0 551 45.4
BcaB06g27104 Brassica carinata HOM05D006674 ORTHO05D007954 1.7e-80 304.3 551 44.8
Dinv28183 Davidia involucrata HOM05D006674 ORTHO05D007954 8.3e-80 302.0 567 46.6
MD17G1268600 Malus domestica HOM05D006674 ORTHO05D007954 1.4e-79 301.2 565 46.5
Thhalv10027712m.g Eutrema salsugineum HOM05D006674 ORTHO05D007954 9.2e-79 298.5 494 48.6
BcaC02g09589 Brassica carinata HOM05D006674 ORTHO05D007954 3.5e-78 296.6 544 43.8
Sp7g04510 Schrenkiella parvula HOM05D006674 ORTHO05D007954 1.7e-77 294.3 528 44.9
Cc07_g13280 Coffea canephora HOM05D006674 ORTHO05D007954 3.0e-77 293.5 566 45.1
Lalb_Chr15g0084971 Lupinus albus HOM05D006674 ORTHO05D007954 6.6e-77 292.4 539 45.3
RcHm_v2.0_Chr3g0491391 Rosa chinensis HOM05D006674 ORTHO05D007954 9.5e-76 288.5 498 48.4
Lj6g0000042 Lotus japonicus HOM05D006674 ORTHO05D007954 2.8e-75 287.0 530 46.0
Glyma.18G041200 Glycine max HOM05D006674 ORTHO05D007954 4.0e-74 283.1 538 44.8
TPR.G24904 Trifolium pratense HOM05D006674 ORTHO05D007954 9.9e-73 278.5 535 44.5
Glyma.11G215400 Glycine max HOM05D006674 ORTHO05D007954 1.3e-72 278.1 526 45.2
Nitab4.5_0001650g0150 Nicotiana tabacum HOM05D006674 ORTHO05D007954 1.7e-72 277.7 574 44.9
CSS0023224 Camellia sinensis var. sinensis HOM05D006674 ORTHO05D007954 9.2e-71 271.9 559 44.5
ECA236G3280 Erigeron canadensis HOM05D006674 ORTHO05D007954 9.2e-71 271.9 484 46.7
Phvul.001G229300 Phaseolus vulgaris HOM05D006674 ORTHO05D007954 2.1e-70 270.8 491 46.0
Psat5g120320 Pisum sativum HOM05D006674 ORTHO05D007954 2.7e-70 270.4 524 45.2
FvH4_1g30190 Fragaria vesca HOM05D006674 ORTHO05D007954 6.0e-70 269.2 495 46.5
Haze_14280 Corylus avellana HOM05D006674 ORTHO05D007954 1.7e-69 267.7 421 51.5
FAN26G0259 Fragaria x ananassa HOM05D006674 ORTHO05D007954 3.0e-69 266.9 494 45.1
Thecc.04G053800 Theobroma cacao HOM05D006674 ORTHO05D007954 3.9e-69 266.5 513 45.6
arahy.Tifrunner.gnm1.ann1.M54V7M Arachis hypogaea HOM05D006674 ORTHO05D007954 8.6e-69 265.4 512 44.5
vmacro18526 Vaccinium macrocarpon HOM05D006674 ORTHO05D007954 8.6e-69 265.4 563 43.7
Duzib133G1445 Durio zibethinus HOM05D006674 ORTHO05D007954 1.9e-68 264.2 515 44.5
Prupe.3G166300 Prunus persica HOM05D006674 ORTHO05D007954 2.5e-68 263.8 422 50.0
Potri.004G085200 Populus trichocarpa HOM05D006674 ORTHO05D007954 7.3e-68 262.3 528 44.3
Atru.chr1.1984 Acer truncatum HOM05D006674 ORTHO05D007954 9.5e-68 261.9 562 42.9
Aa31LG9G17490 Aethionema arabicum HOM05D006674 ORTHO05D007954 1.4e-66 258.1 532 42.3
Nitab4.5_0009806g0010 Nicotiana tabacum HOM05D006674 ORTHO05D007954 2.4e-66 257.3 526 45.2
Lsat_1_v5_gn_1_78040 Lactuca sativa HOM05D006674 ORTHO05D007954 3.1e-66 256.9 501 44.7
Solyc11g011390.3 Solanum lycopersicum HOM05D006674 ORTHO05D007954 4.4e-65 253.1 563 43.5
Rhsim08G0019400 Rhododendron simsii HOM05D006674 ORTHO05D007954 5.8e-65 252.7 373 55.8
Medtr3g065220 Medicago truncatula HOM05D006674 ORTHO05D007954 1.3e-64 251.5 527 41.7
CsaV3_3G017830 Cucumis sativus L. HOM05D006674 ORTHO05D007954 1.7e-64 251.1 566 43.1
PGSC0003DMG400013236 Solanum tuberosum HOM05D006674 ORTHO05D007954 1.7e-64 251.1 463 47.7
unitig_27.g24984 Utricularia gibba HOM05D006674 ORTHO05D007954 4.9e-64 249.6 515 43.7
THA.LOC104805245 Tarenaya hassleriana HOM05D006674 ORTHO05D007954 4.2e-63 246.5 520 42.5
GSVIVG01030703001 Vitis vinifera HOM05D006674 ORTHO05D007954 7.1e-63 245.7 531 43.7
Sed0023155 Sechium edule HOM05D006674 ORTHO05D007954 1.6e-62 244.6 554 43.3
Sopen11g006190 Solanum pennellii HOM05D006674 ORTHO05D007954 1.0e-61 241.9 587 41.6
Peaxi162Scf00562g00218 Petunia axillaris HOM05D006674 ORTHO05D007954 3.0e-61 240.4 305 62.6
VMungo1383G3322 Vigna mungo HOM05D006674 ORTHO05D007954 3.9e-61 240.0 566 32.7
EL10Ac2g03314 Beta vulgaris HOM05D006674 ORTHO05D007954 1.9e-60 237.7 506 41.3
DCAR_016695 Daucus carota HOM05D006674 ORTHO05D007954 7.3e-60 235.7 374 54.0
AL7G46330 Arabidopsis lyrata HOM05D006674 ORTHO05D007954 1.1e-58 231.9 538 40.9
PGR004G1202 Punica granatum HOM05D006674 ORTHO05D007954 1.1e-58 231.9 514 34.2
Aqoxy5G02269 Aquilegia oxysepala HOM05D006674 ORTHO05D007954 3.1e-58 230.3 503 43.1
Manes.01G119600 Manihot esculenta HOM05D006674 ORTHO05D007954 3.1e-58 230.3 496 44.8
CDE06G1904 Ceratophyllum demersum HOM05D006674 ORTHO05D007954 2.2e-56 224.2 480 45.4
HanXRQChr09g0259811 Helianthus annuus HOM05D006674 ORTHO05D007954 2.2e-56 224.2 492 43.1
MELO3C031718.2 Cucumis melo HOM05D006674 ORTHO05D007954 1.9e-55 221.1 374 53.2
BolC4t26017H Brassica oleracea HOM05D006674 ORTHO05D007954 5.4e-55 219.5 559 39.0
Sabra04G0056300 Salix brachista HOM05D006674 ORTHO05D007954 1.6e-54 218.0 556 40.5
A04p10750 Brassica napus HOM05D006674 ORTHO05D007954 2.7e-54 217.2 559 38.5
C04p44470 Brassica napus HOM05D006674 ORTHO05D007954 2.7e-54 217.2 564 38.7
Gohir.A07G073700 Gossypium hirsutum HOM05D006674 ORTHO05D007954 4.6e-54 216.5 520 42.1
arahy.Tifrunner.gnm1.ann1.V27PH4 Arachis hypogaea HOM05D006674 ORTHO05D007954 6.0e-54 216.1 509 41.8
BraA04t16739Z Brassica rapa HOM05D006674 ORTHO05D007954 1.0e-53 215.3 559 38.5
CiPaw.03G073400 Carya illinoinensis HOM05D006674 ORTHO05D007954 5.1e-53 213.0 469 42.4
COL.COLO4_13419 Corchorus olitorius HOM05D006674 ORTHO05D007954 5.1e-53 213.0 492 43.1
Carub.0007s3275 Capsella rubella HOM05D006674 ORTHO05D007954 8.7e-53 212.2 537 39.7
Lj4C259T11 Lonicera japonica HOM05D006674 ORTHO05D007954 9.6e-52 208.8 329 41.0
AUR62042219 Chenopodium quinoa HOM05D006674 ORTHO05D007954 9.0e-50 202.2 491 32.2
Gorai.001G082800 Gossypium raimondii HOM05D006674 ORTHO05D007954 3.3e-44 183.7 520 38.8
Gohir.D07G078400 Gossypium hirsutum HOM05D006674 ORTHO05D007954 2.1e-43 181.0 520 38.7
Ca_17090_v3 Cicer arietinum L. HOM05D006674 ORTHO05D007954 2.8e-43 180.6 294 39.8
Sabra04G0094200 Salix brachista HOM05D002338 ORTHO05D006102 7.6e-41 172.6 438 32.0
CARHR215300 Cardamine hirsuta HOM05D006674 ORTHO05D007954 1.7e-40 171.4 324 35.2
PSO017G4728 Papaver somniferum HOM05D006674 ORTHO05D007954 3.8e-40 170.2 332 50.3
PSO478G0741 Papaver somniferum HOM05D006674 ORTHO05D007954 1.1e-39 168.7 277 54.9
Os04g0278200 Oryza sativa ssp. japonica HOM05D006674 ORTHO05D007954 4.6e-38 163.3 228 64.0
CAN.G222.56 Capsicum annuum HOM05D006674 ORTHO05D007954 1.3e-37 161.8 277 56.7
AT5G37590 Arabidopsis thaliana HOM05D006674 ORTHO05D007954 5.3e-34 149.8 169 49.7
ClCG05G010650 Citrullus lanatus HOM05D006674 ORTHO05D007954 6.9e-34 149.4 328 35.4
Ciclev10011395m.g Citrus clementina HOM05D006674 ORTHO05D007954 2.0e-33 147.9 527 36.2
QL02p059277 Quercus lobata HOM05D006674 ORTHO05D007954 1.0e-32 145.6 188 45.2
ClCG05G010660 Citrullus lanatus HOM05D006674 ORTHO05D007954 9.3e-31 139.0 190 48.4
CAN.G222.57 Capsicum annuum HOM05D006674 ORTHO05D007954 2.7e-30 137.5 273 36.6
ATR0753G105 Amborella trichopoda HOM05D006674 ORTHO05D007954 2.2e-27 127.9 137 47.4
CSS0022976 Camellia sinensis var. sinensis HOM05D006674 ORTHO05D007954 2.2e-24 117.9 106 59.4
SMO170G0006 Selaginella moellendorffii HOM05D005601 ORTHO05D007265 2.9e-24 117.5 197 50.8
SalBow1G3838 Salvia bowleyana HOM05D006674 ORTHO05D007954 1.1e-20 105.5 148 47.3
Zm00001eb221050 Zea mays HOM05D006674 ORTHO05D007954 4.3e-20 103.6 121 48.8
Mapoly0177s0018 Marchantia polymorpha HOM05D006674 ORTHO05D007954 4.8e-19 100.1 127 43.3
ATR0753G123 Amborella trichopoda HOM05D006674 ORTHO05D007954 6.3e-19 99.8 260 31.2
Pp3c16_20720 Physcomitrium patens HOM05D006674 ORTHO05D007954 2.4e-18 97.8 107 45.8
CBR_g12189 Chara braunii HOM05D000019 ORTHO05D000002 1.0e-16 92.4 76 52.6
FAN26G0614 Fragaria x ananassa HOM05D006674 ORTHO05D007954 5.5e-15 86.7 119 44.5
Cpa.g.sc340.5 Carica papaya HOM05D006674 ORTHO05D007954 2.1e-14 84.7 183 33.3
Glyma.08G281500 Glycine max HOM05D006674 ORTHO05D007954 1.8e-13 81.6 68 60.3
CAN.G691.5 Capsicum annuum HOM05D006674 ORTHO05D007954 5.1e-13 80.1 144 42.4
HPP92_002281 Vanilla planifolia HOM05D006674 ORTHO05D007954 1.7e-11 75.1 45 68.9
Hma1.2p1_1214F.1_g267580 Hydrangea macrophylla HOM05D006674 ORTHO05D007954 2.4e-10 71.2 193 32.6
Peaxi162Scf00562g00214 Petunia axillaris HOM05D006674 ORTHO05D007954 3.1e-10 70.9 82 48.8
MCO08G049 Micromonas commoda HOM05D006674 ORTHO05D007954 5.3e-10 70.1 72 48.6
QL02p059314 Quercus lobata HOM05D006674 ORTHO05D007954 7.0e-10 69.7 167 32.3
arahy.Tifrunner.gnm1.ann1.UE2S4S Arachis hypogaea HOM05D006674 ORTHO05D007954 9.1e-10 69.3 61 54.1
Hund13087 Selenicereus undatus HOM05D006674 ORTHO05D007954 1.5e-09 68.6 133 36.1
SEGI_15610 Sequoiadendron giganteum HOM05D006674 ORTHO05D007954 3.5e-09 67.4 78 50.0
CSS0023659 Camellia sinensis var. sinensis HOM05D006674 ORTHO05D007954 1.3e-08 65.5 42 71.4
CAN.G222.66 Capsicum annuum HOM05D006674 ORTHO05D007954 1.7e-08 65.1 143 39.2
Oeu058058.1 Olea europaea HOM05D013212 ORTHO05D007954 1.7e-08 65.1 68 42.6
QL02p059287 Quercus lobata HOM05D006674 ORTHO05D007954 3.8e-08 63.9 49 61.2
Nitab4.5_0004239g0020 Nicotiana tabacum HOM05D006674 ORTHO05D007954 6.1e-06 56.6 68 47.1


User provided reference genes

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