Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold108G30951 Striga asiatica HOM05D007735 ORTHO05D009638 1.7e-76 289.3 145 100.0
SGA_v2.0_scaffold2G00933 Striga asiatica HOM05D007735 ORTHO05D009638 9.0e-38 160.6 147 63.3
Oeu045753.2 Olea europaea HOM05D007735 ORTHO05D009638 6.5e-20 101.3 114 47.4
Migut.H02268 Erythranthe guttata HOM05D007735 ORTHO05D009638 7.9e-18 94.4 147 43.5
Migut.H02270 Erythranthe guttata HOM05D007735 ORTHO05D009638 8.7e-17 90.9 145 44.1
Oeu043409.2 Olea europaea HOM05D007735 ORTHO05D009638 1.9e-16 89.7 126 41.3
Sabra11G0130300 Salix brachista HOM05D007735 ORTHO05D009638 1.4e-14 83.6 127 46.5
Cc07_g12240 Coffea canephora HOM05D007735 ORTHO05D009638 3.1e-14 82.4 138 39.9
Potri.011G145200 Populus trichocarpa HOM05D007735 ORTHO05D009638 3.1e-14 82.4 120 45.0
Manes.01G157700 Manihot esculenta HOM05D007735 ORTHO05D009638 1.5e-13 80.1 134 41.0
Cfa007115 Carpinus fangiana HOM05D007735 ORTHO05D009638 7.7e-13 77.8 136 38.2
PGSC0003DMG400013637 Solanum tuberosum HOM05D007735 ORTHO05D009638 3.8e-12 75.5 139 38.8
VMungo1215G0699 Vigna mungo HOM05D007735 ORTHO05D009638 5.0e-12 75.1 135 38.5
Glyma.16G114400 Glycine max HOM05D007735 ORTHO05D009638 6.5e-12 74.7 133 39.8
Sabra16G0309000 Salix brachista HOM05D007735 ORTHO05D009638 6.5e-12 74.7 122 41.0
Potri.001G456700 Populus trichocarpa HOM05D007735 ORTHO05D009638 1.9e-11 73.2 120 42.5
Peaxi162Scf00918g00052 Petunia axillaris HOM05D007735 ORTHO05D009638 2.5e-11 72.8 140 36.4
Solyc02g082240.1 Solanum lycopersicum HOM05D007735 ORTHO05D009638 2.5e-11 72.8 140 39.3
Sopen02g026900 Solanum pennellii HOM05D007735 ORTHO05D009638 4.2e-11 72.0 139 38.8
TAR381G1223 Trochodendron aralioides HOM05D007735 ORTHO05D009638 5.5e-11 71.6 117 39.3
Lalb_Chr16g0380221 Lupinus albus HOM05D007735 ORTHO05D009638 7.2e-11 71.2 140 37.9
FvH4_1g09950 Fragaria vesca HOM05D007735 ORTHO05D009638 9.4e-11 70.9 130 38.5
FAN19G1654 Fragaria x ananassa HOM05D007735 ORTHO05D009638 9.4e-11 70.9 130 38.5
QL06p053348 Quercus lobata HOM05D007735 ORTHO05D009638 9.4e-11 70.9 131 36.6
Glyma.11G088300 Glycine max HOM05D007735 ORTHO05D009638 1.2e-10 70.5 131 37.4
Nitab4.5_0006309g0010 Nicotiana tabacum HOM05D007735 ORTHO05D009638 1.2e-10 70.5 116 39.7
Nn5g31061 Nelumbo nucifera HOM05D007735 ORTHO05D009638 2.1e-10 69.7 112 40.2
RcHm_v2.0_Chr2g0096741 Rosa chinensis HOM05D007735 ORTHO05D009638 2.1e-10 69.7 116 41.4
CSS0016261 Camellia sinensis var. sinensis HOM05D007735 ORTHO05D009638 2.7e-10 69.3 128 36.7
CSS0025501 Camellia sinensis var. sinensis HOM05D007735 ORTHO05D009638 2.7e-10 69.3 128 41.4
Lalb_Chr09g0324871 Lupinus albus HOM05D007735 ORTHO05D009638 2.7e-10 69.3 133 37.6
Manes.02G117000 Manihot esculenta HOM05D007735 ORTHO05D009638 2.7e-10 69.3 141 36.2
TPR.G19311 Trifolium pratense HOM05D007735 ORTHO05D009638 2.7e-10 69.3 130 39.2
Glyma.01G156500 Glycine max HOM05D007735 ORTHO05D009638 3.6e-10 68.9 135 39.3
Thecc.01G001800 Theobroma cacao HOM05D007735 ORTHO05D009638 3.6e-10 68.9 143 37.8
Glyma.09G195900 Glycine max HOM05D007735 ORTHO05D009638 6.1e-10 68.2 133 37.6
Medtr8g072610 Medicago truncatula HOM05D007735 ORTHO05D009638 6.1e-10 68.2 139 37.4
Phvul.002G119100 Phaseolus vulgaris HOM05D007735 ORTHO05D009638 6.1e-10 68.2 135 37.8
Eucgr.I02199 Eucalyptus grandis HOM05D007735 ORTHO05D009638 7.9e-10 67.8 132 37.1
Gohir.A05G393900 Gossypium hirsutum HOM05D007735 ORTHO05D009638 7.9e-10 67.8 115 40.0
DCAR_014121 Daucus carota HOM05D007735 ORTHO05D009638 1.0e-09 67.4 135 36.3
DCAR_014122 Daucus carota HOM05D007735 ORTHO05D009638 1.0e-09 67.4 135 36.3
Gohir.D04G020900 Gossypium hirsutum HOM05D007735 ORTHO05D009638 1.0e-09 67.4 111 43.2
Psat4g107200 Pisum sativum HOM05D007735 ORTHO05D009638 1.0e-09 67.4 127 38.6
FAN28G1635 Fragaria x ananassa HOM05D007735 ORTHO05D009638 1.8e-09 66.6 114 39.5
FAN23G3070 Fragaria x ananassa HOM05D007735 ORTHO05D009638 2.3e-09 66.2 131 38.9
Gorai.012G025100 Gossypium raimondii HOM05D007735 ORTHO05D009638 2.3e-09 66.2 111 43.2
Lsat_1_v5_gn_3_69161 Lactuca sativa HOM05D007735 ORTHO05D009638 2.3e-09 66.2 112 39.3
ECA246G0225 Erigeron canadensis HOM05D007735 ORTHO05D009638 3.0e-09 65.9 134 38.8
VMungo0251G0553 Vigna mungo HOM05D007735 ORTHO05D009638 8.8e-09 64.3 114 38.6
Lsat_1_v5_gn_2_74220 Lactuca sativa HOM05D007735 ORTHO05D009638 1.5e-08 63.5 148 37.2
Lalb_Chr05g0229481 Lupinus albus HOM05D007735 ORTHO05D009638 1.5e-08 63.5 118 36.4
Psat2g147360 Pisum sativum HOM05D007735 ORTHO05D009638 1.5e-08 63.5 117 39.3
Nitab4.5_0000855g0160 Nicotiana tabacum HOM05D007735 ORTHO05D009638 2.0e-08 63.2 143 35.7
Ca_25020_v3 Cicer arietinum L. HOM05D007735 ORTHO05D009638 2.5e-08 62.8 142 36.6
Phvul.003G272000 Phaseolus vulgaris HOM05D007735 ORTHO05D009638 2.5e-08 62.8 130 37.7
PGSC0003DMG400018690 Solanum tuberosum HOM05D007735 ORTHO05D009638 2.5e-08 62.8 133 33.8
Sc03g0004120 Simmondsia chinensis HOM05D007735 ORTHO05D009638 3.3e-08 62.4 130 33.8
Eucgr.J02566 Eucalyptus grandis HOM05D007735 ORTHO05D009638 1.7e-07 60.1 119 40.3
Lalb_Chr05g0214991 Lupinus albus HOM05D007735 ORTHO05D009638 2.2e-07 59.7 129 34.9
Prupe.7G187700 Prunus persica HOM05D007735 ORTHO05D009638 2.2e-07 59.7 135 37.8
TPR.G33757 Trifolium pratense HOM05D001957 ORTHO05D002015 2.8e-07 59.3 121 36.4
Aqoxy6G03024 Aquilegia oxysepala HOM05D007735 ORTHO05D009638 4.8e-07 58.5 119 37.0
FAN26G0974 Fragaria x ananassa HOM05D007735 ORTHO05D009638 4.8e-07 58.5 102 42.2
PGSC0003DMG400015147 Solanum tuberosum HOM05D007735 ORTHO05D009638 6.3e-07 58.2 113 38.1
Medtr5g024910 Medicago truncatula HOM05D007735 ORTHO05D009638 8.2e-07 57.8 141 34.8
FAN23G2983 Fragaria x ananassa HOM05D007735 ORTHO05D009638 1.1e-06 57.4 103 42.7
Nitab4.5_0004448g0030 Nicotiana tabacum HOM05D007735 ORTHO05D009638 1.4e-06 57.0 146 33.6
Sed0019252 Sechium edule HOM05D007735 ORTHO05D009638 1.4e-06 57.0 107 36.4
Nn6g31607 Nelumbo nucifera HOM05D007735 ORTHO05D009638 1.8e-06 56.6 114 36.8
Lj2g0017807 Lotus japonicus HOM05D007735 ORTHO05D009638 2.4e-06 56.2 145 33.8
Cpa.g.sc6.350 Carica papaya HOM05D007735 ORTHO05D009638 4.1e-06 55.5 116 40.5
Lsat_1_v5_gn_8_114121 Lactuca sativa HOM05D007735 ORTHO05D009638 5.3e-06 55.1 112 36.6
Haze_22869 Corylus avellana HOM05D007735 ORTHO05D009638 9.1e-06 54.3 115 37.4


User provided reference genes

Program Settings