Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold108G30936 Striga asiatica HOM05D007191 ORTHO05D009370 1.8e-212 742.3 358 100.0
MSTRG.23388 Avicennia marina HOM05D007191 ORTHO05D009370 8.2e-109 397.9 333 60.1
SalBow3G4077 Salvia bowleyana HOM05D007191 ORTHO05D009370 5.3e-108 395.2 350 59.7
Migut.H02278 Erythranthe guttata HOM05D007191 ORTHO05D009370 8.5e-106 387.9 345 59.7
Dinv13563 Davidia involucrata HOM05D007191 ORTHO05D009370 2.7e-91 339.7 331 54.4
Solyc11g010900.2 Solanum lycopersicum HOM05D007191 ORTHO05D009370 3.5e-91 339.3 300 56.7
Sopen11g005640 Solanum pennellii HOM05D007191 ORTHO05D009370 1.1e-89 334.3 285 56.8
Peaxi162Scf00085g00523 Petunia axillaris HOM05D007191 ORTHO05D009370 1.9e-89 333.6 276 59.1
Oeu017115.1 Olea europaea HOM05D007191 ORTHO05D009370 3.3e-89 332.8 362 49.2
Dinv36956 Davidia involucrata HOM05D007191 ORTHO05D009370 5.6e-89 332.0 330 52.4
Nitab4.5_0000402g0060 Nicotiana tabacum HOM05D007191 ORTHO05D009370 7.3e-89 331.6 308 53.9
GSVIVG01003951001 Vitis vinifera HOM05D007191 ORTHO05D003232 9.5e-89 331.3 276 59.1
unitig_27.g25347 Utricularia gibba HOM05D007191 ORTHO05D009370 4.7e-88 328.9 272 59.2
MBI16_g30311_MAGBIO Magnolia biondii HOM05D007191 ORTHO05D009370 1.4e-87 327.4 275 59.3
CSS0046556 Camellia sinensis var. sinensis HOM05D007191 ORTHO05D009370 1.8e-87 327.0 270 58.1
QL06p036361 Quercus lobata HOM05D007191 ORTHO05D009370 1.8e-87 327.0 273 57.5
Eucgr.H02435 Eucalyptus grandis HOM05D007191 ORTHO05D009370 3.0e-87 326.2 331 51.4
Actinidia25299 Actinidia chinensis HOM05D007191 ORTHO05D009370 4.0e-87 325.9 328 52.4
Thhalv10025567m.g Eutrema salsugineum HOM05D007191 ORTHO05D009370 6.8e-87 325.1 304 56.6
Ciclev10025907m.g Citrus clementina HOM05D007191 ORTHO05D009370 8.9e-87 324.7 270 57.8
Atru.chr3.1215 Acer truncatum HOM05D007191 ORTHO05D009370 1.5e-86 323.9 326 50.9
Manes.13G101800 Manihot esculenta HOM05D007191 ORTHO05D009370 1.5e-86 323.9 316 52.5
ClCG10G008240 Citrullus lanatus HOM05D007191 ORTHO05D009370 4.4e-86 322.4 275 58.2
Gorai.007G232000 Gossypium raimondii HOM05D007191 ORTHO05D009370 7.5e-86 321.6 332 50.0
CDE04G1458 Ceratophyllum demersum HOM05D007191 ORTHO05D009370 1.7e-85 320.5 268 58.2
Duzib147G1243 Durio zibethinus HOM05D007191 ORTHO05D009370 2.2e-85 320.1 287 55.1
Manes.13G092280 Manihot esculenta HOM05D007191 ORTHO05D009370 2.2e-85 320.1 316 51.6
Thecc.01G088100 Theobroma cacao HOM05D007191 ORTHO05D009370 4.9e-85 318.9 274 56.9
FAN19G0835 Fragaria x ananassa HOM05D007191 ORTHO05D000122 8.3e-85 318.2 273 59.7
Aqoxy6G01485 Aquilegia oxysepala HOM05D007191 ORTHO05D009370 1.1e-84 317.8 289 54.3
PSO541G2681 Papaver somniferum HOM05D007191 ORTHO05D009370 1.1e-84 317.8 274 55.8
vmacro13023 Vaccinium macrocarpon HOM05D007191 ORTHO05D009370 1.1e-84 317.8 321 52.0
Gohir.A11G207400 Gossypium hirsutum HOM05D007191 ORTHO05D009370 1.4e-84 317.4 332 49.4
FvH4_1g19321 Fragaria vesca HOM05D007191 ORTHO05D009370 1.8e-84 317.0 273 59.7
FAN19G2137 Fragaria x ananassa HOM05D007191 ORTHO05D000122 1.8e-84 317.0 273 59.7
PSO675G0552 Papaver somniferum HOM05D007191 ORTHO05D009370 3.2e-84 316.2 274 55.5
Gohir.D11G215700 Gossypium hirsutum HOM05D007191 ORTHO05D009370 4.1e-84 315.8 332 49.4
COL.COLO4_27378 Corchorus olitorius HOM05D007191 ORTHO05D009370 5.4e-84 315.5 273 57.9
CsaV3_3G006990 Cucumis sativus L. HOM05D007191 ORTHO05D009370 7.0e-84 315.1 273 57.9
CiPaw.07G045700 Carya illinoinensis HOM05D007191 ORTHO05D009370 1.2e-83 314.3 273 54.6
RcHm_v2.0_Chr2g0110691 Rosa chinensis HOM05D007191 ORTHO05D003232 1.6e-83 313.9 326 52.5
Prupe.6G204900 Prunus persica HOM05D007191 ORTHO05D009370 3.5e-83 312.8 298 55.4
Carub.0007s0220 Capsella rubella HOM05D007191 ORTHO05D009370 4.6e-83 312.4 276 58.0
Lsat_1_v5_gn_4_142441 Lactuca sativa HOM05D007191 ORTHO05D009370 1.3e-82 310.8 321 49.8
Medtr8g068220 Medicago truncatula HOM05D007191 ORTHO05D009370 1.3e-82 310.8 267 55.8
Glyma.08G276900 Glycine max HOM05D007191 ORTHO05D009370 2.3e-82 310.1 266 56.0
VMungo0251G2065 Vigna mungo HOM05D007191 ORTHO05D009370 3.0e-82 309.7 303 52.8
CANSAT01G2982 Cannabis sativa HOM05D007191 ORTHO05D009370 5.0e-82 308.9 301 50.8
MELO3C014951.2 Cucumis melo HOM05D007191 ORTHO05D009370 8.6e-82 308.1 274 56.6
A01p01070 Brassica napus HOM05D007191 ORTHO05D009370 1.1e-81 307.8 331 51.4
BraA01t00105Z Brassica rapa HOM05D007191 ORTHO05D009370 1.1e-81 307.8 331 51.4
AUR62003688 Chenopodium quinoa HOM05D007191 ORTHO05D009370 1.1e-81 307.8 297 54.2
MD01G1041100 Malus domestica HOM05D007191 ORTHO05D009370 1.1e-81 307.8 273 56.8
Sp7g35660 Schrenkiella parvula HOM05D007191 ORTHO05D009370 1.1e-81 307.8 288 56.2
BcaNung00953 Brassica carinata HOM05D007191 ORTHO05D009370 2.5e-81 306.6 305 52.5
AT4G38020 Arabidopsis thaliana HOM05D007191 ORTHO05D009370 3.3e-81 306.2 307 52.8
BcaNung05371 Brassica carinata HOM05D007191 ORTHO05D009370 3.3e-81 306.2 297 54.9
AL7G12620 Arabidopsis lyrata HOM05D007191 ORTHO05D009370 5.6e-81 305.4 284 57.0
C01p01190 Brassica napus HOM05D007191 ORTHO05D009370 5.6e-81 305.4 305 52.1
Psat4g117600 Pisum sativum HOM05D007191 ORTHO05D009370 9.5e-81 304.7 327 47.1
arahy.Tifrunner.gnm1.ann1.DV4H7C Arachis hypogaea HOM05D007191 ORTHO05D009370 1.2e-80 304.3 267 55.8
THA.LOC104804178 Tarenaya hassleriana HOM05D007191 ORTHO05D009370 1.2e-80 304.3 287 54.0
BolC1t00117H Brassica oleracea HOM05D007191 ORTHO05D009370 1.6e-80 303.9 305 51.8
Aa31LG6G14960 Aethionema arabicum HOM05D007191 ORTHO05D009370 2.1e-80 303.5 326 49.1
CARHR246430 Cardamine hirsuta HOM05D007191 ORTHO05D009370 2.1e-80 303.5 304 53.9
Cpa.g.sc55.6 Carica papaya HOM05D007191 ORTHO05D009370 2.1e-80 303.5 339 50.7
Ca_22623_v3 Cicer arietinum L. HOM05D007191 ORTHO05D009370 3.6e-80 302.8 279 54.5
Lj4g0026970 Lotus japonicus HOM05D007191 ORTHO05D009370 6.2e-80 302.0 279 54.5
Lalb_Chr16g0392111 Lupinus albus HOM05D007191 ORTHO05D009370 6.2e-80 302.0 267 54.3
Phvul.003G287700 Phaseolus vulgaris HOM05D007191 ORTHO05D009370 8.0e-80 301.6 267 54.7
AUR62018000 Chenopodium quinoa HOM05D007191 ORTHO05D009370 1.1e-79 301.2 281 54.8
TWI74G0882 Tripterygium wilfordii HOM05D007191 ORTHO05D009370 3.1e-79 299.7 290 54.5
Ah.03g143260 Amaranthus hybridus HOM05D007191 ORTHO05D009370 4.0e-79 299.3 280 55.4
TPR.G29816 Trifolium pratense HOM05D007191 ORTHO05D009370 5.2e-79 298.9 327 46.5
Potri.005G147600 Populus trichocarpa HOM05D007191 ORTHO05D009370 8.9e-79 298.1 278 54.7
Haze_03901 Corylus avellana HOM05D007191 ORTHO05D009370 4.4e-78 295.8 399 42.9
Nitab4.5_0005446g0010 Nicotiana tabacum HOM05D007191 ORTHO05D009370 7.5e-78 295.0 277 53.4
Sabra05G0118000 Salix brachista HOM05D007191 ORTHO05D009370 4.1e-76 289.3 276 54.0
Sc03g0000490 Simmondsia chinensis HOM05D007191 ORTHO05D009370 4.1e-76 289.3 266 54.1
HanXRQChr09g0259541 Helianthus annuus HOM05D007191 ORTHO05D009370 7.0e-76 288.5 307 48.9
Cfa006863 Carpinus fangiana HOM05D007191 ORTHO05D000122 3.3e-73 279.6 359 44.3
Nn5g29827 Nelumbo nucifera HOM05D007191 ORTHO05D009370 2.3e-71 273.5 272 51.5
arahy.Tifrunner.gnm1.ann1.6T17AW Arachis hypogaea HOM05D007191 ORTHO05D009370 8.9e-71 271.6 267 50.9
Sed0016887 Sechium edule HOM05D007191 ORTHO05D009370 2.6e-70 270.0 278 50.7
DCAR_003441 Daucus carota HOM05D007191 ORTHO05D003232 1.1e-68 264.6 230 56.1
CAN.G1771.10 Capsicum annuum HOM05D007191 ORTHO05D009370 1.4e-68 264.2 229 54.1
HPP92_014152 Vanilla planifolia HOM05D007191 ORTHO05D009370 2.4e-68 263.5 311 44.7
ECA232G3284 Erigeron canadensis HOM05D000006 ORTHO05D000001 3.2e-68 263.1 237 53.2
Os03g0685100 Oryza sativa ssp. japonica HOM05D007191 ORTHO05D009370 2.4e-63 246.9 270 48.5
HPP92_014172 Vanilla planifolia HOM05D007191 ORTHO05D009370 1.2e-62 244.6 275 45.8
Zm00001eb053350 Zea mays HOM05D007191 ORTHO05D009370 3.4e-62 243.0 258 48.8
Lj2A526T20 Lonicera japonica HOM05D007191 ORTHO05D009370 1.9e-60 237.3 334 41.9
PGSC0003DMG400016118 Solanum tuberosum HOM05D007191 ORTHO05D009370 2.1e-59 233.8 184 57.6
SMO364G0498 Selaginella moellendorffii HOM05D007191 ORTHO05D009370 1.2e-56 224.6 300 42.0
Pp3c5_6200 Physcomitrium patens HOM05D007191 ORTHO05D009370 5.1e-50 202.6 292 39.0
Mapoly0036s0111 Marchantia polymorpha HOM05D007191 ORTHO05D009370 1.1e-49 201.4 313 40.9
CBR_g31860 Chara braunii HOM05D000601 ORTHO05D000407 1.2e-46 191.4 346 35.3
Cc00_g34880 Coffea canephora HOM05D007191 ORTHO05D009370 6.4e-45 185.7 153 57.5
AUR62043608 Chenopodium quinoa HOM05D007191 ORTHO05D009370 4.2e-44 183.0 131 62.6
AUR62014153 Chenopodium quinoa HOM05D007191 ORTHO05D002709 1.3e-42 177.9 130 61.5
MCO07G132 Micromonas commoda HOM05D007191 ORTHO05D009370 8.7e-42 175.3 265 39.6
Pp3c5_6210 Physcomitrium patens HOM05D007191 ORTHO05D009370 3.3e-41 173.3 223 41.3
PGR102G1719 Punica granatum HOM05D007191 ORTHO05D009370 1.5e-38 164.5 277 37.9
Cre17.g744947 Chlamydomonas reinhardtii HOM05D007191 ORTHO05D009370 7.6e-30 135.6 225 35.6
PRCOL_00003319 Prasinoderma coloniale HOM05D007191 ORTHO05D009370 1.1e-25 121.7 292 34.2
SEGI_38116 Sequoiadendron giganteum HOM05D007191 ORTHO05D009370 5.3e-23 112.8 155 39.4
SEGI_29034 Sequoiadendron giganteum HOM05D007191 ORTHO05D009370 5.0e-21 106.3 156 38.5
Cc07_g13860 Coffea canephora HOM05D007191 ORTHO05D009370 1.8e-18 97.8 131 43.5
Cc07_g13870 Coffea canephora HOM05D007191 ORTHO05D003232 3.9e-18 96.7 67 58.2
RcHm_v2.0_Chr6g0269301 Rosa chinensis HOM05D007191 ORTHO05D009370 6.3e-08 62.8 99 36.4
SalBow8G1474 Salvia bowleyana HOM05D000221 ORTHO05D359434 4.1e-07 60.1 55 50.9
Ca_28666_v3 Cicer arietinum L. HOM05D005801 ORTHO05D009370 7.0e-07 59.3 140 28.6


User provided reference genes

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