Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold108G30894 Striga asiatica HOM05D008176 ORTHO05D004477 2.4e-81 305.4 157 100.0
MSTRG.23362 Avicennia marina HOM05D008176 ORTHO05D004477 5.2e-31 138.3 160 53.1
SalBow3G2508 Salvia bowleyana HOM05D029310 ORTHO05D004477 2.0e-30 136.3 159 50.3
SalBow3G3284 Salvia bowleyana HOM05D029310 ORTHO05D004477 2.0e-30 136.3 159 50.3
COL.COLO4_27295 Corchorus olitorius HOM05D008176 ORTHO05D004477 3.0e-15 85.9 147 37.4
Manes.12G129900 Manihot esculenta HOM05D008176 ORTHO05D004477 8.9e-15 84.3 147 36.7
Dinv13234 Davidia involucrata HOM05D008176 ORTHO05D004477 1.2e-14 84.0 158 38.0
Sopen11g005030 Solanum pennellii HOM05D008176 ORTHO05D004477 1.2e-14 84.0 159 39.6
CiPaw.04G103600 Carya illinoinensis HOM05D008176 ORTHO05D004477 4.4e-14 82.0 155 40.6
QL06p048130 Quercus lobata HOM05D008176 ORTHO05D004477 5.7e-14 81.6 155 38.7
Peaxi162Scf00237g00201 Petunia axillaris HOM05D008176 ORTHO05D004477 9.8e-14 80.9 159 38.4
PGSC0003DMG400016149 Solanum tuberosum HOM05D008176 ORTHO05D004477 9.8e-14 80.9 159 38.4
Nitab4.5_0000128g0240 Nicotiana tabacum HOM05D008176 ORTHO05D004477 3.7e-13 79.0 150 34.7
Solyc11g010250.1 Solanum lycopersicum HOM05D008176 ORTHO05D004477 4.9e-13 78.6 160 37.5
Atru.chr3.1344 Acer truncatum HOM05D008176 ORTHO05D004477 4.1e-12 75.5 148 37.2
Sopen05g029890 Solanum pennellii HOM05D008176 ORTHO05D004477 4.1e-12 75.5 158 35.4
Thecc.01G095600 Theobroma cacao HOM05D008176 ORTHO05D004477 5.4e-12 75.1 147 37.4
TWI53G0271 Tripterygium wilfordii HOM05D008176 ORTHO05D004477 7.0e-12 74.7 157 31.8
Nitab4.5_0012818g0010 Nicotiana tabacum HOM05D008176 ORTHO05D004477 1.2e-11 73.9 158 32.9
TAR625G0942 Trochodendron aralioides HOM05D008046 ORTHO05D004477 1.2e-11 73.9 146 38.4
Duzib264G0386 Durio zibethinus HOM05D008176 ORTHO05D004477 1.6e-11 73.6 150 38.0
CiPaw.03G145800 Carya illinoinensis HOM05D008176 ORTHO05D004477 5.9e-11 71.6 162 37.0
PGSC0003DMG400016792 Solanum tuberosum HOM05D008176 ORTHO05D004477 1.7e-10 70.1 157 33.8
Medtr3g086830 Medicago truncatula HOM05D008176 ORTHO05D004477 2.9e-10 69.3 149 36.2
VMungo1383G1959 Vigna mungo HOM05D008176 ORTHO05D004477 2.9e-10 69.3 137 35.0
Sabra07G0080300 Salix brachista HOM05D008176 ORTHO05D004477 1.1e-09 67.4 149 37.6
TPR.G16006 Trifolium pratense HOM05D008176 ORTHO05D004477 1.5e-09 67.0 149 38.3
Cpa.g.sc55.74 Carica papaya HOM05D008176 ORTHO05D004477 1.9e-09 66.6 151 38.4
Haze_24851 Corylus avellana HOM05D008176 ORTHO05D004477 2.5e-09 66.2 155 34.2
Manes.13G096700 Manihot esculenta HOM05D008176 ORTHO05D004477 4.3e-09 65.5 146 32.2
Potri.005G072000 Populus trichocarpa HOM05D008176 ORTHO05D004477 9.5e-09 64.3 157 35.0
Duzib187G0825 Durio zibethinus HOM05D008176 ORTHO05D004477 1.6e-08 63.5 147 36.1
Gohir.A11G051100 Gossypium hirsutum HOM05D008176 ORTHO05D004477 2.1e-08 63.2 150 32.0
Gohir.A02G129700 Gossypium hirsutum HOM05D008176 ORTHO05D004477 2.8e-08 62.8 155 32.9
Phvul.001G253900 Phaseolus vulgaris HOM05D008176 ORTHO05D004477 4.7e-08 62.0 139 34.5
SalBow6G0175 Salvia bowleyana HOM05D029310 ORTHO05D004477 4.7e-08 62.0 71 49.3
SalBow8G3730 Salvia bowleyana HOM05D029310 ORTHO05D004477 4.7e-08 62.0 71 49.3
Ca_16509_v3 Cicer arietinum L. HOM05D008176 ORTHO05D004477 8.0e-08 61.2 137 37.2
Gohir.A11G204400 Gossypium hirsutum HOM05D008176 ORTHO05D004477 8.0e-08 61.2 159 35.2
GSVIVG01009081001 Vitis vinifera HOM05D008046 ORTHO05D004477 8.0e-08 61.2 143 33.6
Aqoxy6G00716 Aquilegia oxysepala HOM05D008046 ORTHO05D004477 1.0e-07 60.8 145 30.3
Glyma.05G175800 Glycine max HOM05D008176 ORTHO05D004477 1.0e-07 60.8 141 36.2
Glyma.11G242100 Glycine max HOM05D008176 ORTHO05D004477 1.0e-07 60.8 138 36.2
Sc26g0000200 Simmondsia chinensis HOM05D013332 ORTHO05D004477 1.0e-07 60.8 143 38.5
Hma1.2p1_0019F.1_g013800 Hydrangea macrophylla HOM05D013332 ORTHO05D004477 1.4e-07 60.5 165 28.5
Gohir.D03G040500 Gossypium hirsutum HOM05D008176 ORTHO05D004477 1.8e-07 60.1 155 32.3
Gorai.003G041400 Gossypium raimondii HOM05D008176 ORTHO05D004477 1.8e-07 60.1 155 32.3
Gorai.007G059700 Gossypium raimondii HOM05D008176 ORTHO05D004477 1.8e-07 60.1 150 30.7
Gorai.007G235100 Gossypium raimondii HOM05D008176 ORTHO05D004477 1.8e-07 60.1 159 35.2
TPR.G6203 Trifolium pratense HOM05D008176 ORTHO05D004477 1.8e-07 60.1 141 34.0
CSS0039341 Camellia sinensis var. sinensis HOM05D008046 ORTHO05D004477 2.3e-07 59.7 150 32.7
CSS0034401 Camellia sinensis var. sinensis HOM05D008046 ORTHO05D004477 3.0e-07 59.3 150 33.3
Gohir.D11G218800 Gossypium hirsutum HOM05D008176 ORTHO05D004477 4.0e-07 58.9 149 35.6
Lj4g0008028 Lotus japonicus HOM05D008176 ORTHO05D004477 4.0e-07 58.9 156 35.3
Ciclev10026640m.g Citrus clementina HOM05D008176 ORTHO05D004477 5.2e-07 58.5 149 31.5
Psat5g090880 Pisum sativum HOM05D008176 ORTHO05D004477 5.2e-07 58.5 141 35.5
TWI74G1149 Tripterygium wilfordii HOM05D008176 ORTHO05D004477 5.2e-07 58.5 154 27.9
Medtr8g089920 Medicago truncatula HOM05D008176 ORTHO05D004477 6.8e-07 58.2 148 35.1
Glyma.08G133100 Glycine max HOM05D008176 ORTHO05D004477 8.9e-07 57.8 142 36.6
Phvul.002G260800 Phaseolus vulgaris HOM05D008176 ORTHO05D004477 8.9e-07 57.8 146 37.0
Psat7g056440 Pisum sativum HOM05D008176 ORTHO05D004477 1.2e-06 57.4 142 33.1
CDE05G1898 Ceratophyllum demersum HOM05D000157 ORTHO05D000691 1.5e-06 57.0 150 26.0
Ca_08988_v3 Cicer arietinum L. HOM05D008176 ORTHO05D004477 2.6e-06 56.2 142 31.7
QL02p002440 Quercus lobata HOM05D008046 ORTHO05D004477 2.6e-06 56.2 149 32.2
Migut.H02328 Erythranthe guttata HOM05D008176 ORTHO05D004477 4.4e-06 55.5 63 60.3
Glyma.18G015000 Glycine max HOM05D008176 ORTHO05D004477 5.8e-06 55.1 138 34.1
Nn1g05455 Nelumbo nucifera HOM05D008046 ORTHO05D004477 5.8e-06 55.1 153 28.8
TAR381G0533 Trochodendron aralioides HOM05D008046 ORTHO05D004477 7.5e-06 54.7 153 30.7


User provided reference genes

Program Settings