Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold108G30867 Striga asiatica HOM05D003947 ORTHO05D004614 3.1e-119 431.8 213 100.0
Migut.C00963 Erythranthe guttata HOM05D003947 ORTHO05D004614 1.6e-54 216.9 222 58.6
Dinv41043 Davidia involucrata HOM05D003947 ORTHO05D004614 5.9e-54 214.9 215 60.0
MSTRG.1106 Avicennia marina HOM05D003947 ORTHO05D004614 2.9e-53 212.6 220 57.7
MSTRG.24219 Avicennia marina HOM05D003947 ORTHO05D004614 7.2e-52 208.0 214 57.9
MSTRG.25300 Avicennia marina HOM05D003947 ORTHO05D004614 7.2e-52 208.0 225 56.9
SGA_v2.0_scaffold195G40776 Striga asiatica HOM05D003947 ORTHO05D004614 4.7e-51 205.3 193 60.6
PGSC0003DMG401025066 Solanum tuberosum HOM05D003947 ORTHO05D004614 3.0e-50 202.6 210 58.1
Nitab4.5_0002812g0010 Nicotiana tabacum HOM05D003947 ORTHO05D004614 5.2e-50 201.8 212 57.1
Sopen04g027950 Solanum pennellii HOM05D003947 ORTHO05D004614 5.2e-50 201.8 210 57.6
Nitab4.5_0000099g0180 Nicotiana tabacum HOM05D003947 ORTHO05D004614 6.7e-50 201.4 212 57.1
Cfa018286 Carpinus fangiana HOM05D003947 ORTHO05D004614 1.1e-49 200.7 210 58.1
Peaxi162Scf00360g00029 Petunia axillaris HOM05D003947 ORTHO05D004614 1.1e-49 200.7 216 56.5
Solyc04g071970.4 Solanum lycopersicum HOM05D003947 ORTHO05D004614 1.1e-49 200.7 210 57.1
Cc10_g15190 Coffea canephora HOM05D003947 ORTHO05D004614 5.7e-49 198.4 208 57.7
Hma1.2p1_0358F.1_g134715 Hydrangea macrophylla HOM05D003947 ORTHO05D004614 2.8e-48 196.1 214 54.7
Thecc.08G158700 Theobroma cacao HOM05D003947 ORTHO05D004614 2.8e-48 196.1 211 56.9
CiPaw.15G012800 Carya illinoinensis HOM05D003947 ORTHO05D004614 3.7e-48 195.7 211 56.9
Duzib116G0212 Durio zibethinus HOM05D003947 ORTHO05D004614 3.7e-48 195.7 211 58.3
Glyma.10G221900 Glycine max HOM05D003947 ORTHO05D004614 6.3e-48 194.9 211 55.9
Phvul.007G083100 Phaseolus vulgaris HOM05D003947 ORTHO05D004614 1.1e-47 194.1 209 56.5
VMungo0720G0983 Vigna mungo HOM05D003947 ORTHO05D004614 1.8e-47 193.4 214 55.6
Psat6g190840 Pisum sativum HOM05D003947 ORTHO05D004614 5.3e-47 191.8 212 55.7
Glyma.20G169600 Glycine max HOM05D003947 ORTHO05D004614 7.0e-47 191.4 216 55.1
Hma1.2p1_0678F.1_g202000 Hydrangea macrophylla HOM05D003947 ORTHO05D004614 7.0e-47 191.4 211 54.0
Actinidia17770 Actinidia chinensis HOM05D003947 ORTHO05D004614 2.0e-46 189.9 213 56.8
GSVIVG01034579001 Vitis vinifera HOM05D003947 ORTHO05D004614 2.0e-46 189.9 207 56.0
Actinidia29546 Actinidia chinensis HOM05D003947 ORTHO05D004614 2.7e-46 189.5 212 54.2
SalBow7G0665 Salvia bowleyana HOM05D003947 ORTHO05D004614 2.7e-46 189.5 190 61.1
Ca_10666_v3 Cicer arietinum L. HOM05D003947 ORTHO05D004614 7.7e-46 188.0 214 56.5
Prupe.8G040000 Prunus persica HOM05D003947 ORTHO05D004614 7.7e-46 188.0 208 55.8
CSS0022992 Camellia sinensis var. sinensis HOM05D003947 ORTHO05D004614 1.0e-45 187.6 215 53.0
Lj5g0019118 Lotus japonicus HOM05D003947 ORTHO05D004614 2.2e-45 186.4 218 55.0
Atru.chr13.2012 Acer truncatum HOM05D003947 ORTHO05D004614 3.8e-45 185.7 213 54.9
arahy.Tifrunner.gnm1.ann1.8MR9WY Arachis hypogaea HOM05D003947 ORTHO05D004614 3.8e-45 185.7 214 54.2
CiPaw.16G008700 Carya illinoinensis HOM05D003947 ORTHO05D004614 3.8e-45 185.7 208 54.8
Gorai.005G077400 Gossypium raimondii HOM05D003947 ORTHO05D004614 3.8e-45 185.7 213 57.3
TWI32G0514 Tripterygium wilfordii HOM05D003947 ORTHO05D004614 3.8e-45 185.7 212 55.2
Duzib093G0177 Durio zibethinus HOM05D003947 ORTHO05D004614 5.0e-45 185.3 209 54.1
Gohir.A02G062801 Gossypium hirsutum HOM05D003947 ORTHO05D004614 5.0e-45 185.3 213 56.8
Lalb_Chr21g0305571 Lupinus albus HOM05D003947 ORTHO05D004614 6.5e-45 184.9 215 54.9
Rhsim11G0087300 Rhododendron simsii HOM05D003947 ORTHO05D004614 6.5e-45 184.9 215 53.5
TWI60G0849 Tripterygium wilfordii HOM05D003947 ORTHO05D004614 6.5e-45 184.9 212 53.3
Sabra05G0149600 Salix brachista HOM05D003947 ORTHO05D004614 8.5e-45 184.5 208 53.8
Gohir.D02G068500 Gossypium hirsutum HOM05D003947 ORTHO05D004614 1.1e-44 184.1 213 56.8
Manes.02G182900 Manihot esculenta HOM05D003947 ORTHO05D004614 1.1e-44 184.1 210 53.8
SalBow6G2315 Salvia bowleyana HOM05D003947 ORTHO05D004614 1.5e-44 183.7 195 56.4
MD10G1033900 Malus domestica HOM05D003947 ORTHO05D004614 1.9e-44 183.3 210 53.8
MD05G1032900 Malus domestica HOM05D003947 ORTHO05D004614 3.2e-44 182.6 210 53.8
AUR62026639 Chenopodium quinoa HOM05D003947 ORTHO05D004614 4.2e-44 182.2 212 53.8
Gohir.D05G247600 Gossypium hirsutum HOM05D003947 ORTHO05D004614 5.5e-44 181.8 210 54.8
Manes.18G094500 Manihot esculenta HOM05D003947 ORTHO05D004614 7.2e-44 181.4 208 53.8
Potri.005G196300 Populus trichocarpa HOM05D003947 ORTHO05D004614 7.2e-44 181.4 208 53.8
Gorai.009G258400 Gossypium raimondii HOM05D003947 ORTHO05D004614 1.2e-43 180.6 210 54.3
CANSAT25G3237 Cannabis sativa HOM05D003947 ORTHO05D004614 1.6e-43 180.3 210 53.8
Dinv25896 Davidia involucrata HOM05D003947 ORTHO05D004614 1.6e-43 180.3 195 54.4
PSO541G4258 Papaver somniferum HOM05D003947 ORTHO05D004614 1.6e-43 180.3 207 53.1
PSO675G7401 Papaver somniferum HOM05D003947 ORTHO05D004614 2.1e-43 179.9 204 54.4
Potri.002G064900 Populus trichocarpa HOM05D003947 ORTHO05D004614 2.1e-43 179.9 211 54.0
Sabra02G0051800 Salix brachista HOM05D003947 ORTHO05D004614 2.1e-43 179.9 208 53.8
Gohir.A05G246100 Gossypium hirsutum HOM05D003947 ORTHO05D004614 2.7e-43 179.5 210 54.3
Sc02g0003850 Simmondsia chinensis HOM05D003947 ORTHO05D004614 2.7e-43 179.5 210 55.7
Ciclev10002453m.g Citrus clementina HOM05D003947 ORTHO05D004614 3.6e-43 179.1 217 55.3
Eucgr.F04191 Eucalyptus grandis HOM05D003947 ORTHO05D004614 3.6e-43 179.1 209 54.5
Oeu017623.1 Olea europaea HOM05D003947 ORTHO05D004614 4.0e-42 175.6 190 55.8
TAR376G1220 Trochodendron aralioides HOM05D003947 ORTHO05D004614 4.0e-42 175.6 205 52.7
arahy.Tifrunner.gnm1.ann1.2W58SS Arachis hypogaea HOM05D003947 ORTHO05D004614 5.2e-42 175.3 208 52.4
arahy.Tifrunner.gnm1.ann1.H1TMWI Arachis hypogaea HOM05D003947 ORTHO05D004614 5.2e-42 175.3 208 52.4
Medtr1g098260 Medicago truncatula HOM05D003947 ORTHO05D004614 5.2e-42 175.3 234 48.7
TAR628G1588 Trochodendron aralioides HOM05D003947 ORTHO05D004614 5.2e-42 175.3 186 57.0
TAR625G1169 Trochodendron aralioides HOM05D003947 ORTHO05D004614 6.8e-42 174.9 185 58.4
Migut.N03200 Erythranthe guttata HOM05D003947 ORTHO05D004614 1.2e-41 174.1 225 48.9
Oeu051281.1 Olea europaea HOM05D003947 ORTHO05D004614 1.2e-41 174.1 191 56.0
Oeu002064.1 Olea europaea HOM05D003947 ORTHO05D004614 1.5e-41 173.7 193 56.0
Haze_17801 Corylus avellana HOM05D003947 ORTHO05D004614 2.0e-41 173.3 186 56.5
FAN27G1126 Fragaria x ananassa HOM05D003947 ORTHO05D004614 2.6e-41 172.9 209 50.7
MBI04_g08942_MAGBIO Magnolia biondii HOM05D003947 ORTHO05D004614 2.6e-41 172.9 242 47.1
Glyma.16G163700 Glycine max HOM05D003947 ORTHO05D004614 3.4e-41 172.6 209 52.2
Oeu022056.3 Olea europaea HOM05D003947 ORTHO05D004614 3.4e-41 172.6 193 57.5
Actinidia04751 Actinidia chinensis HOM05D003947 ORTHO05D004614 4.4e-41 172.2 199 53.8
Sed0008617 Sechium edule HOM05D003947 ORTHO05D004614 4.4e-41 172.2 211 50.7
FvH4_2g13060 Fragaria vesca HOM05D003947 ORTHO05D004614 5.7e-41 171.8 209 50.7
COL.COLO4_03360 Corchorus olitorius HOM05D003947 ORTHO05D004614 7.5e-41 171.4 187 57.8
FAN24G1125 Fragaria x ananassa HOM05D003947 ORTHO05D004614 7.5e-41 171.4 211 50.2
PGR044G0664 Punica granatum HOM05D003947 ORTHO05D004614 9.8e-41 171.0 217 50.2
Hund17479 Selenicereus undatus HOM05D003947 ORTHO05D004614 3.7e-40 169.1 207 53.6
QL02p038162 Quercus lobata HOM05D003947 ORTHO05D004614 6.3e-40 168.3 184 56.5
CSS0014660 Camellia sinensis var. sinensis HOM05D003947 ORTHO05D004614 1.1e-39 167.5 196 51.5
RcHm_v2.0_Chr6g0274321 Rosa chinensis HOM05D003947 ORTHO05D004614 1.1e-39 167.5 210 51.0
Lj7P382T65 Lonicera japonica HOM05D003947 ORTHO05D004614 1.8e-39 166.8 188 56.4
TAR381G1088 Trochodendron aralioides HOM05D003947 ORTHO05D004614 2.4e-39 166.4 182 57.1
Lalb_Chr02g0141531 Lupinus albus HOM05D003947 ORTHO05D004614 4.1e-39 165.6 213 48.4
HanXRQChr10g0278611 Helianthus annuus HOM05D003947 ORTHO05D004614 5.4e-39 165.2 215 51.2
DCAR_001161 Daucus carota HOM05D003947 ORTHO05D004614 9.1e-39 164.5 195 52.8
FAN15G1092 Fragaria x ananassa HOM05D003947 ORTHO05D004614 9.1e-39 164.5 205 49.8
Aqoxy6G00408 Aquilegia oxysepala HOM05D003947 ORTHO05D004614 2.7e-38 162.9 186 53.8
AUR62034897 Chenopodium quinoa HOM05D003947 ORTHO05D004614 2.7e-38 162.9 191 52.9
vmacro21121 Vaccinium macrocarpon HOM05D003947 ORTHO05D004614 3.5e-38 162.5 206 51.0
Aa31LG7G6750 Aethionema arabicum HOM05D003947 ORTHO05D004614 4.5e-38 162.2 205 50.2
Cpa.g.sc26.88 Carica papaya HOM05D003947 ORTHO05D004614 1.0e-37 161.0 187 52.9
arahy.Tifrunner.gnm1.ann1.P1AQDG Arachis hypogaea HOM05D003947 ORTHO05D004614 1.7e-37 160.2 193 53.4
ClCG08G003050 Citrullus lanatus HOM05D003947 ORTHO05D004614 1.7e-37 160.2 197 52.8
Ah.05g168170 Amaranthus hybridus HOM05D003947 ORTHO05D004614 8.5e-37 157.9 188 54.3
Duzib041G0104 Durio zibethinus HOM05D003947 ORTHO05D004614 1.1e-36 157.5 187 56.1
Sed0016828 Sechium edule HOM05D003947 ORTHO05D004614 1.9e-36 156.8 187 52.4
HanXRQChr05g0162361 Helianthus annuus HOM05D003947 ORTHO05D004614 2.5e-36 156.4 219 47.5
Nn1g06005 Nelumbo nucifera HOM05D003947 ORTHO05D004614 4.2e-36 155.6 199 48.7
THA.LOC104806764 Tarenaya hassleriana HOM05D003947 ORTHO05D004614 1.2e-35 154.1 209 49.3
HPP92_002802 Vanilla planifolia HOM05D003947 ORTHO05D004614 1.2e-35 154.1 208 46.6
Glyma.02G079300 Glycine max HOM05D003947 ORTHO05D004614 8.0e-35 151.4 207 47.8
Lj4P703T37 Lonicera japonica HOM05D003947 ORTHO05D004614 1.0e-34 151.0 188 53.7
Aa31LG4G8980 Aethionema arabicum HOM05D003947 ORTHO05D004614 2.0e-33 146.7 204 46.1
unitig_32.g11256 Utricularia gibba HOM05D003947 ORTHO05D004614 4.4e-33 145.6 230 45.7
Os01g0589700 Oryza sativa ssp. japonica HOM05D003947 ORTHO05D004614 5.7e-33 145.2 206 45.1
THA.LOC104813088 Tarenaya hassleriana HOM05D003947 ORTHO05D004614 1.3e-32 144.1 207 46.4
vmacro01489 Vaccinium macrocarpon HOM05D003947 ORTHO05D004614 1.7e-32 143.7 191 50.3
AL1G36340 Arabidopsis lyrata HOM05D003947 ORTHO05D004614 2.2e-32 143.3 216 44.4
Hund26679 Selenicereus undatus HOM05D003947 ORTHO05D004614 2.2e-32 143.3 187 50.8
Thhalv10008850m.g Eutrema salsugineum HOM05D003947 ORTHO05D004614 3.7e-32 142.5 199 46.7
ECA246G0665 Erigeron canadensis HOM05D003947 ORTHO05D006423 1.1e-31 141.0 209 45.9
AT1G22790 Arabidopsis thaliana HOM05D003947 ORTHO05D004614 1.8e-31 140.2 218 44.0
Carub.0001s2230 Capsella rubella HOM05D003947 ORTHO05D004614 7.0e-31 138.3 219 43.4
Rhsim06G0091600 Rhododendron simsii HOM05D003947 ORTHO05D004614 7.0e-31 138.3 204 48.0
THA.LOC104810422 Tarenaya hassleriana HOM05D003947 ORTHO05D004614 7.0e-31 138.3 212 45.8
Aa31LG6G8230 Aethionema arabicum HOM05D003947 ORTHO05D004614 9.2e-31 137.9 202 46.5
Carub.0001s3209 Capsella rubella HOM05D003947 ORTHO05D004614 1.2e-30 137.5 214 44.9
CARHR023150 Cardamine hirsuta HOM05D003947 ORTHO05D004614 1.6e-30 137.1 226 43.8
A09p32460 Brassica napus HOM05D003947 ORTHO05D004614 2.7e-30 136.3 201 45.8
BolC5t32518H Brassica oleracea HOM05D003947 ORTHO05D004614 3.5e-30 136.0 199 46.2
Zm00001eb160770 Zea mays HOM05D003947 ORTHO05D004614 3.5e-30 136.0 210 42.9
PGR042G2534 Punica granatum HOM05D003947 ORTHO05D004614 4.5e-30 135.6 209 46.4
BcaB07g33023 Brassica carinata HOM05D030501 ORTHO05D004614 7.7e-30 134.8 208 42.8
Sp1g29270 Schrenkiella parvula HOM05D003947 ORTHO05D004614 7.7e-30 134.8 216 44.4
BcaC08g43824 Brassica carinata HOM05D003947 ORTHO05D004614 2.3e-29 133.3 199 43.7
BolC6t36345H Brassica oleracea HOM05D003947 ORTHO05D004614 2.3e-29 133.3 199 43.7
Lalb_Chr19g0130101 Lupinus albus HOM05D003947 ORTHO05D004614 6.6e-29 131.7 206 44.7
VMungo0464G0903 Vigna mungo HOM05D003947 ORTHO05D004614 6.6e-29 131.7 186 47.3
AL1G48450 Arabidopsis lyrata HOM05D003947 ORTHO05D004614 8.6e-29 131.3 214 43.5
Lsat_1_v5_gn_6_101640 Lactuca sativa HOM05D003947 ORTHO05D004614 1.1e-28 131.0 217 42.9
C06p12080 Brassica napus HOM05D003947 ORTHO05D004614 1.5e-28 130.6 199 43.7
A05p24080 Brassica napus HOM05D003947 ORTHO05D004614 1.9e-28 130.2 198 47.0
AT1G34010 Arabidopsis thaliana HOM05D003947 ORTHO05D004614 2.5e-28 129.8 208 45.7
CARHR033390 Cardamine hirsuta HOM05D003947 ORTHO05D004614 3.3e-28 129.4 212 44.3
BcaC05g27781 Brassica carinata HOM05D003947 ORTHO05D004614 5.6e-28 128.6 205 44.9
Lsat_1_v5_gn_1_5261 Lactuca sativa HOM05D003947 ORTHO05D004614 2.1e-27 126.7 226 39.4
Lj2g0016258 Lotus japonicus HOM05D003947 ORTHO05D004614 4.7e-27 125.6 203 45.8
Zm00001eb357510 Zea mays HOM05D003947 ORTHO05D004614 5.2e-26 122.1 188 43.1
MELO3C008326.2 Cucumis melo HOM05D003947 ORTHO05D004614 8.9e-26 121.3 210 42.9
BraA09t38788Z Brassica rapa HOM05D003947 ORTHO05D004614 2.0e-25 120.2 177 45.2
CsaV3_6G005040 Cucumis sativus L. HOM05D003947 ORTHO05D004614 2.6e-25 119.8 210 42.9
TPR.G17018 Trifolium pratense HOM05D003947 ORTHO05D004614 5.7e-25 118.6 177 44.6
ClCG08G007400 Citrullus lanatus HOM05D003947 ORTHO05D004614 2.4e-23 113.2 211 40.8
C05p37750 Brassica napus HOM05D003947 ORTHO05D004614 5.4e-23 112.1 181 44.2
BraA05t21288Z Brassica rapa HOM05D003947 ORTHO05D006423 1.6e-22 110.5 174 46.0
SalBow7G0026 Salvia bowleyana HOM05D003947 ORTHO05D004614 7.8e-22 108.2 92 66.3
BcaNung06442 Brassica carinata HOM05D003947 ORTHO05D004614 2.5e-20 103.2 233 33.5
Phvul.004G091200 Phaseolus vulgaris HOM05D003947 ORTHO05D004614 2.5e-20 103.2 184 39.7
Actinidia26828 Actinidia chinensis HOM05D003947 ORTHO05D004614 3.3e-20 102.8 162 44.4
Manes.16G051400 Manihot esculenta HOM05D003947 ORTHO05D004614 7.3e-20 101.7 153 45.1
PSO170G0396 Papaver somniferum HOM05D003947 ORTHO05D004614 3.6e-19 99.4 208 39.4
BraA09t39684Z Brassica rapa HOM05D003947 ORTHO05D004614 6.8e-18 95.1 224 36.2
ATR1120G111 Amborella trichopoda HOM05D003947 ORTHO05D004614 1.3e-16 90.9 211 38.9
PSO700G0284 Papaver somniferum HOM05D003947 ORTHO05D004614 4.9e-16 89.0 206 37.9
SHI09085 Sapria himalayana HOM05D003947 ORTHO05D004614 1.1e-15 87.8 190 38.4
Lsat_1_v5_gn_9_42121 Lactuca sativa HOM05D003947 ORTHO05D004614 1.4e-15 87.4 205 40.5
Os05g0591450 Oryza sativa ssp. japonica HOM05D003947 ORTHO05D004614 1.5e-12 77.4 73 56.2
A09p41960 Brassica napus HOM05D003947 ORTHO05D004614 2.6e-09 66.6 214 30.4
BcaNung06106 Brassica carinata HOM05D003947 ORTHO05D004614 7.5e-09 65.1 175 32.6
BolC5t30884H Brassica oleracea HOM05D003947 ORTHO05D004614 1.7e-08 63.9 230 30.9
Sed0006124 Sechium edule HOM05D003947 ORTHO05D004614 3.7e-08 62.8 167 35.9
C05p21890 Brassica napus HOM05D003947 ORTHO05D004614 6.4e-08 62.0 160 31.9
Sed0022469 Sechium edule HOM05D003947 ORTHO05D004614 1.1e-07 61.2 177 36.2
Aqoxy5G02026 Aquilegia oxysepala HOM05D003947 ORTHO05D004614 2.7e-06 56.6 192 29.2
HPP92_002804 Vanilla planifolia HOM05D003947 ORTHO05D004614 3.5e-06 56.2 135 37.0


User provided reference genes

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