Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold108G30849 Striga asiatica HOM05D003764 ORTHO05D004356 2.0e-239 832.0 429 100.0
SGA_v2.0_scaffold108G30854 Striga asiatica HOM05D003764 ORTHO05D004356 9.3e-208 726.9 431 89.8
SGA_v2.0_scaffold275G46585 Striga asiatica HOM05D003764 ORTHO05D004356 1.1e-187 660.2 427 77.0
Migut.C00953 Erythranthe guttata HOM05D003764 ORTHO05D004356 1.4e-182 643.3 429 76.7
Migut.C00949 Erythranthe guttata HOM05D003764 ORTHO05D004356 1.0e-174 617.1 372 78.2
MSTRG.25298 Avicennia marina HOM05D003764 ORTHO05D004356 1.1e-173 613.6 429 70.4
MSTRG.1112 Avicennia marina HOM05D003764 ORTHO05D004356 1.1e-171 607.1 425 70.8
SalBow7G4127 Salvia bowleyana HOM05D003764 ORTHO05D004356 3.5e-170 602.1 453 66.4
SGA_v2.0_scaffold275G46588 Striga asiatica HOM05D003764 ORTHO05D004356 1.9e-168 596.3 333 84.4
Oeu021826.1 Olea europaea HOM05D003764 ORTHO05D004356 3.2e-168 595.5 432 67.4
Oeu035836.1 Olea europaea HOM05D003764 ORTHO05D004356 2.0e-165 586.3 432 65.5
Solyc12g094550.2 Solanum lycopersicum HOM05D003764 ORTHO05D004356 5.3e-155 551.6 341 73.3
Sopen12g031450 Solanum pennellii HOM05D003764 ORTHO05D004356 3.5e-154 548.9 341 72.7
PGSC0003DMG400029320 Solanum tuberosum HOM05D003764 ORTHO05D004356 7.7e-154 547.7 341 72.4
Dinv31931 Davidia involucrata HOM05D003764 ORTHO05D004356 1.0e-153 547.4 447 59.5
Nitab4.5_0003544g0010 Nicotiana tabacum HOM05D003764 ORTHO05D004356 1.7e-153 546.6 424 61.8
Nitab4.5_0000699g0100 Nicotiana tabacum HOM05D003764 ORTHO05D004356 5.0e-153 545.0 341 71.8
Cc10_g00740 Coffea canephora HOM05D003764 ORTHO05D004356 7.2e-152 541.2 414 63.5
Peaxi162Scf00064g01131 Petunia axillaris HOM05D003764 ORTHO05D004356 8.0e-151 537.7 341 71.8
GSVIVG01008681001 Vitis vinifera HOM05D003764 ORTHO05D004356 1.0e-150 537.3 439 59.2
Nn6g31748 Nelumbo nucifera HOM05D003764 ORTHO05D004356 4.0e-150 535.4 344 69.2
AT1G76250 Arabidopsis thaliana HOM05D003764 ORTHO05D004356 2.6e-149 532.7 342 71.6
Manes.05G135000 Manihot esculenta HOM05D003764 ORTHO05D004356 2.6e-149 532.7 341 71.3
Manes.18G006000 Manihot esculenta HOM05D003764 ORTHO05D004356 7.5e-149 531.2 341 71.3
Rhsim06G0008200 Rhododendron simsii HOM05D003764 ORTHO05D004356 9.8e-149 530.8 341 71.0
vmacro21825 Vaccinium macrocarpon HOM05D003764 ORTHO05D004356 9.8e-149 530.8 439 57.9
Ciclev10001182m.g Citrus clementina HOM05D003764 ORTHO05D004356 1.7e-148 530.0 436 60.6
Sp5g31390 Schrenkiella parvula HOM05D003764 ORTHO05D004356 1.7e-148 530.0 342 70.2
BcaC08g47274 Brassica carinata HOM05D003764 ORTHO05D004356 2.8e-148 529.3 364 68.1
C06p50220 Brassica napus HOM05D003764 ORTHO05D004356 2.8e-148 529.3 364 68.1
BolC6t40061H Brassica oleracea HOM05D003764 ORTHO05D004356 2.8e-148 529.3 364 68.1
Haze_22757 Corylus avellana HOM05D003764 ORTHO05D004356 2.8e-148 529.3 444 58.1
arahy.Tifrunner.gnm1.ann1.I18LAP Arachis hypogaea HOM05D003764 ORTHO05D004356 6.3e-148 528.1 429 59.2
A07p41820 Brassica napus HOM05D003764 ORTHO05D004356 6.3e-148 528.1 364 67.6
arahy.Tifrunner.gnm1.ann1.CSAI9D Arachis hypogaea HOM05D003764 ORTHO05D004356 1.4e-147 526.9 429 59.2
Actinidia15487 Actinidia chinensis HOM05D003764 ORTHO05D004356 3.1e-147 525.8 373 65.7
Lj4A804T73 Lonicera japonica HOM05D003764 ORTHO05D004356 9.1e-147 524.2 370 67.3
BraA07t31712Z Brassica rapa HOM05D003764 ORTHO05D004356 1.2e-146 523.9 364 67.3
CANSAT80G1902 Cannabis sativa HOM05D003764 ORTHO05D004356 1.6e-146 523.5 342 70.5
CARHR069810 Cardamine hirsuta HOM05D003764 ORTHO05D004356 1.6e-146 523.5 340 69.7
Thhalv10018564m.g Eutrema salsugineum HOM05D003764 ORTHO05D004356 2.0e-146 523.1 342 70.2
RcHm_v2.0_Chr6g0304171 Rosa chinensis HOM05D003764 ORTHO05D004356 2.7e-146 522.7 426 59.4
Peaxi162Scf00104g00322 Petunia axillaris HOM05D003764 ORTHO05D004356 3.5e-146 522.3 423 59.3
CiPaw.07G139600 Carya illinoinensis HOM05D003764 ORTHO05D004356 7.7e-146 521.2 438 59.1
Eucgr.F01754 Eucalyptus grandis HOM05D003764 ORTHO05D004356 1.0e-145 520.8 341 69.5
MD08G1003100 Malus domestica HOM05D003764 ORTHO05D004356 1.7e-145 520.0 443 58.0
Actinidia17035 Actinidia chinensis HOM05D003764 ORTHO05D004356 3.8e-145 518.8 437 59.0
Nitab4.5_0000588g0130 Nicotiana tabacum HOM05D003764 ORTHO05D004356 3.8e-145 518.8 341 70.1
BcaC08g47123 Brassica carinata HOM05D003764 ORTHO05D004356 5.0e-145 518.5 363 66.4
FAN27G3424 Fragaria x ananassa HOM05D003764 ORTHO05D004356 5.0e-145 518.5 429 58.5
Lj1g0016047 Lotus japonicus HOM05D003764 ORTHO05D004356 5.0e-145 518.5 342 68.1
Carub.0002s2314 Capsella rubella HOM05D003764 ORTHO05D004356 6.6e-145 518.1 342 68.7
PGR031G0670 Punica granatum HOM05D003764 ORTHO05D004356 8.6e-145 517.7 355 67.3
CANSAT25G3149 Cannabis sativa HOM05D003764 ORTHO05D004356 1.1e-144 517.3 342 68.7
TWI56G0154 Tripterygium wilfordii HOM05D003764 ORTHO05D004356 1.9e-144 516.5 351 66.7
TAR628G1614 Trochodendron aralioides HOM05D003764 ORTHO05D004356 1.9e-144 516.5 343 67.6
FAN15G2102 Fragaria x ananassa HOM05D003764 ORTHO05D004356 2.5e-144 516.2 429 58.0
BraA07t30497Z Brassica rapa HOM05D003764 ORTHO05D004356 3.3e-144 515.8 355 67.0
BcaB02g07057 Brassica carinata HOM05D003764 ORTHO05D004356 4.2e-144 515.4 342 69.3
Ca_15440_v3 Cicer arietinum L. HOM05D003764 ORTHO05D004356 4.2e-144 515.4 423 58.2
Nn5g30922 Nelumbo nucifera HOM05D003764 ORTHO05D004356 4.2e-144 515.4 430 58.1
A07p28580 Brassica napus HOM05D003764 ORTHO05D004356 7.2e-144 514.6 353 67.4
VMungo1309G0568 Vigna mungo HOM05D003764 ORTHO05D004356 2.1e-143 513.1 341 67.2
TPR.G38113 Trifolium pratense HOM05D003764 ORTHO05D004356 2.8e-143 512.7 341 67.4
Aa31LG4G6340 Aethionema arabicum HOM05D003764 ORTHO05D004356 3.6e-143 512.3 342 68.1
PGSC0003DMG400009974 Solanum tuberosum HOM05D003764 ORTHO05D004356 4.7e-143 511.9 345 67.2
Glyma.04G018600 Glycine max HOM05D003764 ORTHO05D004356 8.0e-143 511.1 427 56.4
Sabra05G0193100 Salix brachista HOM05D003764 ORTHO05D004356 8.0e-143 511.1 368 65.5
BcaC08g45536 Brassica carinata HOM05D003764 ORTHO05D004356 1.8e-142 510.0 342 68.1
C06p32120 Brassica napus HOM05D003764 ORTHO05D004356 1.8e-142 510.0 342 68.1
BolC6t38338H Brassica oleracea HOM05D003764 ORTHO05D004356 1.8e-142 510.0 342 68.1
FvH4_2g37560 Fragaria vesca HOM05D003764 ORTHO05D004356 4.0e-142 508.8 429 57.6
Solyc04g082280.3 Solanum lycopersicum HOM05D003764 ORTHO05D004356 4.0e-142 508.8 343 67.6
Sopen04g035900 Solanum pennellii HOM05D003764 ORTHO05D004356 5.2e-142 508.4 343 67.3
Medtr3g115180 Medicago truncatula HOM05D003764 ORTHO05D004356 8.9e-142 507.7 338 67.8
Potri.002G011400 Populus trichocarpa HOM05D003764 ORTHO05D004356 8.9e-142 507.7 369 64.8
Hund01762 Selenicereus undatus HOM05D003764 ORTHO05D004356 1.5e-141 506.9 341 67.4
AUR62043557 Chenopodium quinoa HOM05D003764 ORTHO05D004356 2.0e-141 506.5 341 68.3
Prupe.1G355100 Prunus persica HOM05D003764 ORTHO05D004356 2.0e-141 506.5 341 67.7
QL02p013934 Quercus lobata HOM05D003764 ORTHO05D004356 2.0e-141 506.5 344 66.6
Potri.005G249600 Populus trichocarpa HOM05D003764 ORTHO05D004356 5.7e-141 505.0 359 65.7
Sabra02G0008800 Salix brachista HOM05D003764 ORTHO05D004356 5.7e-141 505.0 341 68.6
unitig_747.g21519 Utricularia gibba HOM05D003764 ORTHO05D004356 5.7e-141 505.0 353 66.0
Phvul.009G021800 Phaseolus vulgaris HOM05D003764 ORTHO05D004356 1.7e-140 503.4 341 66.0
Psat0s5633g0040 Pisum sativum HOM05D003764 ORTHO05D004356 2.8e-140 502.7 341 66.6
CSS0020809 Camellia sinensis var. sinensis HOM05D003764 ORTHO05D004356 4.9e-140 501.9 405 64.4
AUR62036887 Chenopodium quinoa HOM05D003764 ORTHO05D004356 4.9e-140 501.9 341 67.7
Ah.00g000380 Amaranthus hybridus HOM05D003764 ORTHO05D004356 6.3e-140 501.5 344 67.4
Duzib116G0421 Durio zibethinus HOM05D003764 ORTHO05D004356 1.1e-139 500.7 341 66.0
PSO210G7283 Papaver somniferum HOM05D003764 ORTHO05D004356 1.4e-139 500.4 343 66.8
Sed0020753 Sechium edule HOM05D003764 ORTHO05D004356 1.4e-139 500.4 359 65.7
Glyma.06G018900 Glycine max HOM05D003764 ORTHO05D004356 7.0e-139 498.0 428 55.6
MBI08_g19981_MAGBIO Magnolia biondii HOM05D003764 ORTHO05D004356 1.6e-138 496.9 341 65.1
PSO170G5992 Papaver somniferum HOM05D003764 ORTHO05D004356 3.5e-138 495.7 343 66.2
Thecc.08G057700 Theobroma cacao HOM05D003764 ORTHO05D004356 3.5e-138 495.7 434 55.8
Gorai.009G188300 Gossypium raimondii HOM05D003764 ORTHO05D004356 1.0e-137 494.2 424 56.1
Aqoxy6G01751 Aquilegia oxysepala HOM05D003764 ORTHO05D004356 1.3e-137 493.8 346 66.2
Gohir.A05G180000 Gossypium hirsutum HOM05D003764 ORTHO05D004356 2.3e-137 493.0 424 55.9
Sc02g0009060 Simmondsia chinensis HOM05D003764 ORTHO05D004356 2.3e-137 493.0 344 64.2
ClCG11G018640 Citrullus lanatus HOM05D003764 ORTHO05D004356 3.9e-137 492.3 343 64.7
Lalb_Chr11g0061681 Lupinus albus HOM05D003764 ORTHO05D004356 3.9e-137 492.3 341 65.4
COL.COLO4_03998 Corchorus olitorius HOM05D003764 ORTHO05D004356 1.5e-136 490.3 341 64.8
Gorai.002G118500 Gossypium raimondii HOM05D003764 ORTHO05D004356 5.6e-136 488.4 414 56.0
EL10Ac1g01980 Beta vulgaris HOM05D003764 ORTHO05D004356 1.2e-135 487.3 342 66.4
Gohir.D01G093100 Gossypium hirsutum HOM05D003764 ORTHO05D004356 1.6e-135 486.9 414 55.8
Lsat_1_v5_gn_2_6240 Lactuca sativa HOM05D003764 ORTHO05D004356 1.6e-135 486.9 425 57.2
Eucgr.F03548 Eucalyptus grandis HOM05D003764 ORTHO05D004356 6.1e-135 485.0 349 63.6
Lalb_Chr23g0265831 Lupinus albus HOM05D003764 ORTHO05D004356 6.1e-135 485.0 340 65.0
CsaV3_4G037170 Cucumis sativus L. HOM05D003764 ORTHO05D004356 2.3e-134 483.0 342 63.7
Gohir.D05G183000 Gossypium hirsutum HOM05D003764 ORTHO05D004356 8.9e-134 481.1 424 55.2
MELO3C017015.2 Cucumis melo HOM05D003764 ORTHO05D004356 1.5e-133 480.3 342 63.7
SHI08003 Sapria himalayana HOM05D003764 ORTHO05D004356 1.7e-132 476.9 341 63.3
HanXRQChr14g0428241 Helianthus annuus HOM05D003764 ORTHO05D004356 2.2e-132 476.5 338 64.5
ATR0106G001 Amborella trichopoda HOM05D003764 ORTHO05D004356 7.0e-131 471.5 342 62.9
Peaxi162Scf00064g01016 Petunia axillaris HOM05D003764 ORTHO05D004356 1.2e-130 470.7 312 70.8
Duzib093G1245 Durio zibethinus HOM05D003764 ORTHO05D004356 6.0e-130 468.4 341 61.9
Gohir.A01G106600 Gossypium hirsutum HOM05D003764 ORTHO05D004356 7.8e-130 468.0 409 54.5
HanXRQChr15g0491851 Helianthus annuus HOM05D003764 ORTHO05D004356 1.2e-127 460.7 342 61.7
HPP92_026195 Vanilla planifolia HOM05D003764 ORTHO05D004356 1.2e-127 460.7 343 61.5
CDE06G1096 Ceratophyllum demersum HOM05D003764 ORTHO05D004356 3.7e-124 449.1 345 59.4
PSO170G6284 Papaver somniferum HOM05D003764 ORTHO05D004356 1.9e-123 446.8 339 61.4
Sabra02G0008700 Salix brachista HOM05D003764 ORTHO05D004356 7.0e-123 444.9 361 60.7
PSO017G4841 Papaver somniferum HOM05D003764 ORTHO05D004356 1.2e-122 444.1 340 61.5
PSO017G1698 Papaver somniferum HOM05D003764 ORTHO05D004356 2.7e-122 443.0 339 60.5
PSO170G1328 Papaver somniferum HOM05D003764 ORTHO05D004356 6.0e-122 441.8 339 60.5
PSO170G4333 Papaver somniferum HOM05D003764 ORTHO05D004356 6.0e-122 441.8 339 60.8
PSO017G3905 Papaver somniferum HOM05D003764 ORTHO05D004356 1.3e-121 440.7 344 60.2
Cfa014062 Carpinus fangiana HOM05D003764 ORTHO05D004356 9.5e-120 434.5 446 49.8
PSO017G1302 Papaver somniferum HOM05D003764 ORTHO05D004356 4.7e-119 432.2 338 60.7
PSO170G2421 Papaver somniferum HOM05D003764 ORTHO05D004356 4.7e-119 432.2 343 59.5
THA.LOC104813245 Tarenaya hassleriana HOM05D003764 ORTHO05D004356 6.2e-119 431.8 354 59.6
PSO104G0104 Papaver somniferum HOM05D003764 ORTHO05D004356 2.3e-118 429.9 341 59.8
PSO017G3919 Papaver somniferum HOM05D003764 ORTHO05D004356 2.2e-116 423.3 338 59.2
Cpa.g.sc26.208 Carica papaya HOM05D003764 ORTHO05D004356 3.7e-116 422.5 289 66.1
PSO170G3515 Papaver somniferum HOM05D003764 ORTHO05D004356 6.4e-116 421.8 339 59.9
HPP92_022192 Vanilla planifolia HOM05D003764 ORTHO05D004356 1.1e-115 421.0 341 57.2
HPP92_022186 Vanilla planifolia HOM05D003764 ORTHO05D004356 1.4e-115 420.6 341 57.2
PSO017G1063 Papaver somniferum HOM05D003764 ORTHO05D004356 1.2e-114 417.5 339 58.4
HPP92_026182 Vanilla planifolia HOM05D003764 ORTHO05D004356 6.6e-113 411.8 288 64.9
unitig_699.g19216 Utricularia gibba HOM05D003764 ORTHO05D004356 5.2e-110 402.1 363 53.4
SEGI_06086 Sequoiadendron giganteum HOM05D003764 ORTHO05D004356 8.4e-108 394.8 345 55.1
unitig_747.g21882 Utricularia gibba HOM05D003764 ORTHO05D004356 8.4e-108 394.8 397 49.4
unitig_0.g1266 Utricularia gibba HOM05D003764 ORTHO05D004356 1.1e-107 394.4 342 55.0
MD15G1002800 Malus domestica HOM05D003764 ORTHO05D004356 5.4e-107 392.1 250 70.4
SEGI_23487 Sequoiadendron giganteum HOM05D003764 ORTHO05D004356 1.7e-105 387.1 345 54.2
DCAR_013910 Daucus carota HOM05D003764 ORTHO05D004356 3.3e-104 382.9 447 48.3
unitig_699.g19217 Utricularia gibba HOM05D003764 ORTHO05D004356 1.6e-103 380.6 363 51.8
CDE07G0072 Ceratophyllum demersum HOM05D003764 ORTHO05D004356 2.9e-100 369.8 305 56.4
TWI12G0241 Tripterygium wilfordii HOM05D003764 ORTHO05D004356 1.4e-99 367.5 251 64.5
Pp3c14_15070 Physcomitrium patens HOM05D003764 ORTHO05D004356 4.2e-99 365.9 342 50.9
A09p51670 Brassica napus HOM05D003764 ORTHO05D004356 4.6e-98 362.5 241 67.2
Sabra02G0009000 Salix brachista HOM05D003764 ORTHO05D004356 1.0e-97 361.3 240 68.3
Mapoly0049s0068 Marchantia polymorpha HOM05D003764 ORTHO05D004356 7.6e-93 345.1 346 49.1
AagrBONN_evm.TU.Sc2ySwM_228.3221 Anthoceros agrestis HOM05D003764 ORTHO05D004356 1.7e-92 344.0 363 44.9
Zm00001eb209300 Zea mays HOM05D003764 ORTHO05D004356 1.9e-91 340.5 393 47.1
Mapoly0006s0188 Marchantia polymorpha HOM05D003764 ORTHO05D004356 1.0e-89 334.7 340 47.1
HanXRQChr14g0428221 Helianthus annuus HOM05D003764 ORTHO05D004356 7.4e-88 328.6 237 61.2
SMO141G0079 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 1.8e-86 323.9 348 46.6
Atru.chr13.152 Acer truncatum HOM05D003764 ORTHO05D004356 1.8e-81 307.4 187 77.5
ECA238G1445 Erigeron canadensis HOM05D003764 ORTHO05D004356 1.8e-81 307.4 237 57.4
unitig_52.g17754 Utricularia gibba HOM05D003764 ORTHO05D004356 1.4e-78 297.7 241 55.6
SMO364G0266 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 9.0e-78 295.0 346 40.8
Pp3c1_32600 Physcomitrium patens HOM05D003764 ORTHO05D004356 7.6e-77 292.0 347 42.9
SMO147G0236 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 1.7e-76 290.8 343 42.0
AagrBONN_evm.TU.Sc2ySwM_368.3397 Anthoceros agrestis HOM05D003764 ORTHO05D004356 2.2e-76 290.4 301 45.8
Pp3c17_5840 Physcomitrium patens HOM05D003764 ORTHO05D004356 5.5e-75 285.8 351 41.3
Pp3c17_7390 Physcomitrium patens HOM05D003764 ORTHO05D004356 8.7e-73 278.5 342 42.1
Pp3c2_5370 Physcomitrium patens HOM05D003764 ORTHO05D004356 1.1e-72 278.1 344 40.4
SMO367G1018 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 2.2e-68 263.8 342 40.1
CBR_g3019 Chara braunii HOM05D003764 ORTHO05D004356 2.2e-60 237.3 364 39.0
DCAR_010127 Daucus carota HOM05D003764 ORTHO05D004356 5.7e-40 169.5 154 55.8
Aqoxy6G01618 Aquilegia oxysepala HOM05D003764 ORTHO05D004356 1.7e-39 167.9 152 58.6
CBR_g9154 Chara braunii HOM05D003764 ORTHO05D004356 1.6e-37 161.4 416 30.0
ATR0756G001 Amborella trichopoda HOM05D003764 ORTHO05D004356 3.4e-24 117.1 114 46.5
Cfa013034 Carpinus fangiana HOM05D003764 ORTHO05D004356 5.9e-21 106.3 85 49.4
Os02g0119600 Oryza sativa ssp. japonica HOM05D003764 ORTHO05D004356 9.5e-19 99.0 79 49.4
ATR0276G001 Amborella trichopoda HOM05D003764 ORTHO05D004356 8.0e-18 95.9 100 43.0
SMO170G0013 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 5.2e-17 93.2 121 38.8
ATR0138G019 Amborella trichopoda HOM05D003764 ORTHO05D004356 1.5e-11 75.1 108 40.7
Potri.012G136700 Populus trichocarpa HOM05D003764 ORTHO05D004356 2.2e-07 61.2 53 58.5
SMO176G0018 Selaginella moellendorffii HOM05D011762 ORTHO05D004356 1.4e-06 58.5 65 41.5
SMO176G0019 Selaginella moellendorffii HOM05D011762 ORTHO05D014803 2.4e-06 57.8 65 41.5


User provided reference genes

Program Settings