Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold108G30846 Striga asiatica HOM05D001509 ORTHO05D001361 5.3e-61 237.7 134 100.0
SGA_v2.0_scaffold2G01288 Striga asiatica HOM05D001509 ORTHO05D001361 4.4e-47 191.4 154 77.9
Migut.H02446 Erythranthe guttata HOM05D001509 ORTHO05D001361 6.0e-20 101.3 141 44.7
MSTRG.23308 Avicennia marina HOM05D001509 ORTHO05D001361 1.4e-16 90.1 149 40.3
MSTRG.2525 Avicennia marina HOM05D001509 ORTHO05D001361 6.8e-16 87.8 145 39.3
PGSC0003DMG400031205 Solanum tuberosum HOM05D001509 ORTHO05D001361 5.1e-11 71.6 154 35.1
Solyc04g051660.3 Solanum lycopersicum HOM05D001509 ORTHO05D001361 1.5e-10 70.1 154 35.1
Sopen04g023010 Solanum pennellii HOM05D001509 ORTHO05D001361 1.5e-10 70.1 154 35.1
Nitab4.5_0000184g0220 Nicotiana tabacum HOM05D001509 ORTHO05D001361 7.3e-10 67.8 122 36.1
Cc07_g16460 Coffea canephora HOM05D001509 ORTHO05D001361 1.2e-09 67.0 130 37.7
Peaxi162Scf00106g01217 Petunia axillaris HOM05D001509 ORTHO05D001361 1.2e-09 67.0 113 38.9
Nitab4.5_0001532g0040 Nicotiana tabacum HOM05D001509 ORTHO05D001361 1.6e-09 66.6 121 36.4
Lsat_1_v5_gn_4_140021 Lactuca sativa HOM05D001509 ORTHO05D001361 4.7e-09 65.1 120 35.0
Dinv19468 Davidia involucrata HOM05D001509 ORTHO05D001361 8.1e-09 64.3 150 35.3
HanXRQChr09g0254791 Helianthus annuus HOM05D001509 ORTHO05D001361 4.0e-08 62.0 130 36.2
unitig_0.g478 Utricularia gibba HOM05D001509 ORTHO05D001361 6.8e-08 61.2 145 33.1
Actinidia05380 Actinidia chinensis HOM05D001509 ORTHO05D001361 1.5e-07 60.1 150 31.3
EL10Ac6g14777 Beta vulgaris HOM05D001509 ORTHO05D001361 2.6e-07 59.3 77 44.2
CAN.G997.10 Capsicum annuum HOM05D001509 ORTHO05D001361 3.4e-07 58.9 45 62.2
CiPaw.03G132900 Carya illinoinensis HOM05D001509 ORTHO05D001361 5.8e-07 58.2 123 32.5
Oeu044096.1 Olea europaea HOM05D002293 ORTHO05D006850 9.9e-07 57.4 45 57.8
AUR62027169 Chenopodium quinoa HOM05D001509 ORTHO05D001361 2.2e-06 56.2 62 43.5
Actinidia06104 Actinidia chinensis HOM05D001509 ORTHO05D001361 6.4e-06 54.7 62 43.5
AUR62003292 Chenopodium quinoa HOM05D001509 ORTHO05D001361 6.4e-06 54.7 44 52.3


User provided reference genes

Program Settings