Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold107G30767 Striga asiatica HOM05D000938 ORTHO05D001451 5.7e-124 447.6 224 100.0
SGA_v2.0_scaffold273G46466 Striga asiatica HOM05D000938 ORTHO05D001451 4.3e-55 218.8 117 90.6
SGA_v2.0_scaffold54G19616 Striga asiatica HOM05D000938 ORTHO05D001451 2.2e-43 179.9 113 78.8
Migut.H00821 Erythranthe guttata HOM05D000938 ORTHO05D001451 6.2e-38 161.8 120 69.2
MSTRG.23491 Avicennia marina HOM05D000938 ORTHO05D001451 4.3e-31 139.0 119 58.8
Dinv29655 Davidia involucrata HOM05D000938 ORTHO05D001451 1.5e-23 114.0 112 55.4
Dinv36347 Davidia involucrata HOM05D000938 ORTHO05D001451 4.3e-23 112.5 112 54.5
Migut.L00579 Erythranthe guttata HOM05D000938 ORTHO05D001451 8.2e-22 108.2 115 56.5
CiPaw.04G079100 Carya illinoinensis HOM05D000938 ORTHO05D001451 3.1e-21 106.3 113 50.4
Cc02_g33890 Coffea canephora HOM05D000938 ORTHO05D001451 3.1e-21 106.3 111 53.2
Migut.L00277 Erythranthe guttata HOM05D000938 ORTHO05D001451 6.9e-21 105.1 117 53.0
vmacro12751 Vaccinium macrocarpon HOM05D000938 ORTHO05D001451 6.9e-21 105.1 118 51.7
QL10p041154 Quercus lobata HOM05D000938 ORTHO05D001451 1.2e-20 104.4 111 50.5
Dinv12778 Davidia involucrata HOM05D000938 ORTHO05D001451 2.0e-20 103.6 101 55.4
Sabra05G0056000 Salix brachista HOM05D000938 ORTHO05D001451 5.9e-20 102.1 109 53.2
VMungo0251G2900 Vigna mungo HOM05D000938 ORTHO05D001451 1.3e-19 100.9 108 48.1
Sabra05G0056100 Salix brachista HOM05D000938 ORTHO05D001451 2.9e-19 99.8 109 51.4
CSS0009834 Camellia sinensis var. sinensis HOM05D000938 ORTHO05D001451 5.0e-19 99.0 114 51.8
Duzib187G1406 Durio zibethinus HOM05D000938 ORTHO05D001451 1.4e-18 97.4 114 45.6
Potri.005G068700 Populus trichocarpa HOM05D000938 ORTHO05D001451 1.9e-18 97.1 114 46.5
Potri.007G100600 Populus trichocarpa HOM05D000938 ORTHO05D001451 1.9e-18 97.1 116 49.1
Phvul.002G274500 Phaseolus vulgaris HOM05D000938 ORTHO05D001451 2.5e-18 96.7 108 48.1
Nn5g28429 Nelumbo nucifera HOM05D000938 ORTHO05D001451 4.2e-18 95.9 112 47.3
Rhsim10G0127000 Rhododendron simsii HOM05D000938 ORTHO05D001451 4.2e-18 95.9 111 54.1
SalBow7G1570 Salvia bowleyana HOM05D000938 ORTHO05D001451 4.2e-18 95.9 118 50.0
Sabra07G0083200 Salix brachista HOM05D000938 ORTHO05D001451 5.5e-18 95.5 119 46.2
TWI75G1331 Tripterygium wilfordii HOM05D000938 ORTHO05D001451 5.5e-18 95.5 116 49.1
TWI75G1557 Tripterygium wilfordii HOM05D000938 ORTHO05D001451 5.5e-18 95.5 109 51.4
Glyma.05G194350 Glycine max HOM05D000938 ORTHO05D001451 7.2e-18 95.1 116 44.8
HanXRQChr10g0309421 Helianthus annuus HOM05D000938 ORTHO05D001451 7.2e-18 95.1 120 45.0
Lj4g0000059 Lotus japonicus HOM05D000938 ORTHO05D001451 7.2e-18 95.1 104 50.0
Medtr0095s0080 Medicago truncatula HOM05D000938 ORTHO05D001451 1.2e-17 94.4 115 48.7
Lalb_Chr07g0184261 Lupinus albus HOM05D000938 ORTHO05D001451 1.6e-17 94.0 110 50.9
arahy.Tifrunner.gnm1.ann1.GX4ZEE Arachis hypogaea HOM05D000938 ORTHO05D001451 2.7e-17 93.2 116 45.7
CiPaw.03G117700 Carya illinoinensis HOM05D000938 ORTHO05D001451 2.7e-17 93.2 116 44.8
Duzib264G1224 Durio zibethinus HOM05D000938 ORTHO05D001451 2.7e-17 93.2 114 44.7
Gohir.A05G381500 Gossypium hirsutum HOM05D000938 ORTHO05D001451 2.7e-17 93.2 108 45.4
Medtr8g494200 Medicago truncatula HOM05D000938 ORTHO05D001451 2.7e-17 93.2 107 50.5
PGR119G0365 Punica granatum HOM05D000938 ORTHO05D001451 2.7e-17 93.2 122 47.5
arahy.Tifrunner.gnm1.ann1.Q4LS46 Arachis hypogaea HOM05D000938 ORTHO05D001451 3.6e-17 92.8 123 43.9
Ca_17622_v3 Cicer arietinum L. HOM05D000938 ORTHO05D001451 3.6e-17 92.8 106 51.9
Gohir.D04G033800 Gossypium hirsutum HOM05D000938 ORTHO05D001451 3.6e-17 92.8 108 45.4
Gorai.012G038100 Gossypium raimondii HOM05D000938 ORTHO05D001451 3.6e-17 92.8 108 45.4
Manes.12G147100 Manihot esculenta HOM05D000938 ORTHO05D001451 3.6e-17 92.8 116 46.6
Lsat_1_v5_gn_5_82100 Lactuca sativa HOM05D000938 ORTHO05D001451 4.6e-17 92.4 119 46.2
Solyc02g032850.3 Solanum lycopersicum HOM05D000938 ORTHO05D001451 6.1e-17 92.0 122 45.9
PGSC0003DMG400019873 Solanum tuberosum HOM05D000938 ORTHO05D001451 6.1e-17 92.0 121 45.5
Actinidia06582 Actinidia chinensis HOM05D000938 ORTHO05D001451 2.3e-16 90.1 113 47.8
Thecc.01G138600 Theobroma cacao HOM05D000938 ORTHO05D001451 3.0e-16 89.7 114 43.0
Glyma.08G002100 Glycine max HOM05D000938 ORTHO05D001451 3.9e-16 89.4 108 44.4
Sopen02g011180 Solanum pennellii HOM05D000938 ORTHO05D001451 3.9e-16 89.4 115 47.0
ECA234G2409 Erigeron canadensis HOM05D000938 ORTHO05D001451 5.1e-16 89.0 120 44.2
TAR625G1159 Trochodendron aralioides HOM05D000938 ORTHO05D001451 5.1e-16 89.0 117 48.7
Cpa.g.sc37.13 Carica papaya HOM05D000938 ORTHO05D001451 8.7e-16 88.2 107 45.8
PGR119G1832 Punica granatum HOM05D000938 ORTHO05D001451 8.7e-16 88.2 125 44.8
FAN23G2201 Fragaria x ananassa HOM05D000938 ORTHO05D001451 1.1e-15 87.8 132 41.7
Nitab4.5_0006396g0010 Nicotiana tabacum HOM05D000938 ORTHO05D001451 1.1e-15 87.8 121 42.1
Oeu008233.1 Olea europaea HOM05D000938 ORTHO05D001451 3.3e-15 86.3 116 48.3
arahy.Tifrunner.gnm1.ann1.YKDH6D Arachis hypogaea HOM05D000938 ORTHO05D001451 4.3e-15 85.9 105 46.7
Psat7g045480 Pisum sativum HOM05D000938 ORTHO05D001451 4.3e-15 85.9 101 47.5
PGR102G2206 Punica granatum HOM05D000938 ORTHO05D001451 5.7e-15 85.5 126 44.4
FAN26G2282 Fragaria x ananassa HOM05D000938 ORTHO05D001451 7.4e-15 85.1 133 42.1
FvH4_1g24940 Fragaria vesca HOM05D000938 ORTHO05D001451 9.7e-15 84.7 133 41.4
FAN19G2886 Fragaria x ananassa HOM05D000938 ORTHO05D001451 9.7e-15 84.7 133 41.4
Sc09g0002220 Simmondsia chinensis HOM05D000938 ORTHO05D001451 9.7e-15 84.7 124 45.2
CANSAT01G1052 Cannabis sativa HOM05D000938 ORTHO05D001451 1.6e-14 84.0 125 40.0
arahy.Tifrunner.gnm1.ann1.NKX1H6 Arachis hypogaea HOM05D000938 ORTHO05D001451 2.8e-14 83.2 105 46.7
Thecc.01G138400 Theobroma cacao HOM05D000938 ORTHO05D001451 3.7e-14 82.8 105 44.8
Peaxi162Scf00331g01128 Petunia axillaris HOM05D000938 ORTHO05D001451 4.8e-14 82.4 111 43.2
EL10Ac4g09634 Beta vulgaris HOM05D000938 ORTHO05D001451 6.3e-14 82.0 116 42.2
Sed0022724 Sechium edule HOM05D000938 ORTHO05D001451 6.3e-14 82.0 119 41.2
Atru.chr4.1003 Acer truncatum HOM05D000938 ORTHO05D001451 8.2e-14 81.6 110 40.0
arahy.Tifrunner.gnm1.ann1.RJ9TTJ Arachis hypogaea HOM05D000938 ORTHO05D001451 8.2e-14 81.6 105 45.7
Phvul.009G154000 Phaseolus vulgaris HOM05D000938 ORTHO05D001451 8.2e-14 81.6 115 40.9
Glyma.06G156300 Glycine max HOM05D000938 ORTHO05D001451 1.1e-13 81.3 105 46.7
MSTRG.2770 Avicennia marina HOM05D000938 ORTHO05D001451 1.4e-13 80.9 60 63.3
Manes.12G159500 Manihot esculenta HOM05D000938 ORTHO05D001451 1.8e-13 80.5 111 42.3
ClCG04G001930 Citrullus lanatus HOM05D000938 ORTHO05D001451 2.4e-13 80.1 120 40.0
COL.COLO4_12066 Corchorus olitorius HOM05D000938 ORTHO05D001451 3.1e-13 79.7 102 44.1
Lalb_Chr11g0068651 Lupinus albus HOM05D000938 ORTHO05D001451 9.0e-13 78.2 116 44.0
MBI03_g28477_MAGBIO Magnolia biondii HOM05D001090 ORTHO05D008663 1.2e-12 77.8 114 39.5
MD15G1136300 Malus domestica HOM05D000938 ORTHO05D001451 1.5e-12 77.4 123 42.3
GSVIVG01022328001 Vitis vinifera HOM05D000938 ORTHO05D001451 2.0e-12 77.0 111 42.3
Glyma.04G209700 Glycine max HOM05D000938 ORTHO05D001451 2.6e-12 76.6 105 44.8
arahy.Tifrunner.gnm1.ann1.KTYQ03 Arachis hypogaea HOM05D000938 ORTHO05D001451 4.5e-12 75.9 106 45.3
Ciclev10000576m.g Citrus clementina HOM05D000938 ORTHO05D001451 2.9e-11 73.2 118 43.2
Aqoxy6G00324 Aquilegia oxysepala HOM05D000938 ORTHO05D001451 3.8e-11 72.8 117 42.7
Nn1g08978 Nelumbo nucifera HOM05D000938 ORTHO05D001451 3.8e-11 72.8 113 40.7
Prupe.4G276500 Prunus persica HOM05D000938 ORTHO05D001451 3.8e-11 72.8 119 42.9
DCAR_019991 Daucus carota HOM05D000938 ORTHO05D001451 6.5e-11 72.0 112 39.3
AUR62000526 Chenopodium quinoa HOM05D000938 ORTHO05D001451 1.1e-10 71.2 110 41.8
MELO3C008938.2 Cucumis melo HOM05D000938 ORTHO05D001451 1.1e-10 71.2 115 41.7
AUR62006871 Chenopodium quinoa HOM05D000938 ORTHO05D001451 1.4e-10 70.9 117 39.3
RcHm_v2.0_Chr2g0122591 Rosa chinensis HOM05D000938 ORTHO05D001451 1.4e-10 70.9 116 39.7
CsaV3_4G030710 Cucumis sativus L. HOM05D000938 ORTHO05D001451 5.5e-10 68.9 113 41.6
VMungo1309G0230 Vigna mungo HOM05D000938 ORTHO05D001451 7.2e-10 68.6 104 39.4
Ah.06g191090 Amaranthus hybridus HOM05D000938 ORTHO05D001451 9.4e-10 68.2 103 39.8
Hund07231 Selenicereus undatus HOM05D000938 ORTHO05D001451 1.6e-09 67.4 115 42.6
THA.LOC104804461 Tarenaya hassleriana HOM05D000938 ORTHO05D001451 6.7e-08 62.0 107 39.3
Aa31LG10G7470 Aethionema arabicum HOM05D000938 ORTHO05D001451 2.0e-07 60.5 105 34.3
TPR.G37403 Trifolium pratense HOM05D000938 ORTHO05D001451 1.7e-06 57.4 99 36.4


User provided reference genes

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