Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold107G30742 Striga asiatica HOM05D001495 ORTHO05D401745 1.3e-57 226.1 108 100.0
CANSAT11G1739 Cannabis sativa HOM05D001495 ORTHO05D001391 1.2e-07 60.1 65 49.2
GSVIVG01034966001 Vitis vinifera HOM05D001495 ORTHO05D001391 1.2e-07 60.1 64 50.0
Migut.G00044 Erythranthe guttata HOM05D001495 ORTHO05D001391 2.1e-07 59.3 64 50.0
CiPaw.02G073400 Carya illinoinensis HOM05D001495 ORTHO05D001391 2.7e-07 58.9 64 50.0
Ciclev10006924m.g Citrus clementina HOM05D001495 ORTHO05D001391 2.7e-07 58.9 64 50.0
SGA_v2.0_scaffold157G37332 Striga asiatica HOM05D001495 ORTHO05D001391 3.6e-07 58.5 64 50.0
Manes.03G206500 Manihot esculenta HOM05D001495 ORTHO05D001391 4.7e-07 58.2 64 48.4
QL06p012773 Quercus lobata HOM05D001495 ORTHO05D001391 4.7e-07 58.2 64 48.4
SGA_v2.0_scaffold64G22100 Striga asiatica HOM05D001495 ORTHO05D001391 4.7e-07 58.2 61 49.2
Dinv15145 Davidia involucrata HOM05D001495 ORTHO05D001391 8.0e-07 57.4 65 47.7
Atru.chr4.3049 Acer truncatum HOM05D001495 ORTHO05D001391 1.0e-06 57.0 64 48.4
FvH4_4g20210 Fragaria vesca HOM05D001495 ORTHO05D001391 1.8e-06 56.2 64 46.9
FAN07G0514 Fragaria x ananassa HOM05D001495 ORTHO05D001391 1.8e-06 56.2 64 46.9
RcHm_v2.0_Chr4g0425821 Rosa chinensis HOM05D001495 ORTHO05D001391 1.8e-06 56.2 64 46.9
Cfa015287 Carpinus fangiana HOM05D001495 ORTHO05D001391 2.3e-06 55.8 64 46.9
Nn3g21739 Nelumbo nucifera HOM05D001495 ORTHO05D001391 2.3e-06 55.8 64 46.9
CAN.G114.5 Capsicum annuum HOM05D001495 ORTHO05D001391 3.0e-06 55.5 61 47.5
Oeu027342.1 Olea europaea HOM05D001495 ORTHO05D001391 3.0e-06 55.5 64 46.9
Peaxi162Scf00228g00515 Petunia axillaris HOM05D001495 ORTHO05D001391 3.0e-06 55.5 61 47.5
Hund11986 Selenicereus undatus HOM05D001495 ORTHO05D001391 3.0e-06 55.5 64 46.9
Solyc01g058450.3 Solanum lycopersicum HOM05D001495 ORTHO05D001391 3.0e-06 55.5 61 47.5
Sopen01g024010 Solanum pennellii HOM05D001495 ORTHO05D001391 3.0e-06 55.5 61 47.5
MELO3C021258.2 Cucumis melo HOM05D001495 ORTHO05D001391 5.2e-06 54.7 64 45.3
CsaV3_6G028500 Cucumis sativus L. HOM05D001495 ORTHO05D001391 5.2e-06 54.7 64 45.3
CsaV3_UNG230160 Cucumis sativus L. HOM05D001495 ORTHO05D001391 5.2e-06 54.7 64 45.3
Dinv44266 Davidia involucrata HOM05D001495 ORTHO05D001391 5.2e-06 54.7 65 44.6
Sc25g0003200 Simmondsia chinensis HOM05D001495 ORTHO05D001391 5.2e-06 54.7 65 44.6
Ca_21427_v3 Cicer arietinum L. HOM05D001495 ORTHO05D001391 6.7e-06 54.3 64 46.9
Cc03_g00650 Coffea canephora HOM05D001495 ORTHO05D001391 6.7e-06 54.3 64 46.9
Eucgr.H04064 Eucalyptus grandis HOM05D001495 ORTHO05D001391 6.7e-06 54.3 64 46.9
PSO673G0031 Papaver somniferum HOM05D001495 ORTHO05D001391 6.7e-06 54.3 64 46.9
PSO724G0940 Papaver somniferum HOM05D001495 ORTHO05D001391 6.7e-06 54.3 64 46.9
Thecc.04G304200 Theobroma cacao HOM05D001495 ORTHO05D001391 6.7e-06 54.3 61 47.5
Actinidia13351 Actinidia chinensis HOM05D001495 ORTHO05D001391 8.8e-06 53.9 64 45.3
Lj6A693T65 Lonicera japonica HOM05D001495 ORTHO05D001391 8.8e-06 53.9 64 45.3
Lalb_Chr07g0181991 Lupinus albus HOM05D001495 ORTHO05D001391 8.8e-06 53.9 64 46.9
PGR004G1092 Punica granatum HOM05D001495 ORTHO05D001391 8.8e-06 53.9 64 46.9


User provided reference genes

Program Settings