Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold106G30705 Striga asiatica HOM05D004967 ORTHO05D006146 7.6e-55 216.9 105 100.0
SGA_v2.0_scaffold25G11115 Striga asiatica HOM05D004967 ORTHO05D006146 3.6e-44 181.4 108 84.3
SGA_v2.0_scaffold28G12004 Striga asiatica HOM05D004967 ORTHO05D006146 8.8e-35 150.2 107 68.2
MSTRG.22413 Avicennia marina HOM05D004967 ORTHO05D006146 2.1e-28 129.0 106 62.3
Migut.N03288 Erythranthe guttata HOM05D004967 ORTHO05D006146 1.0e-27 126.7 104 61.5
SalBow6G6278 Salvia bowleyana HOM05D004967 ORTHO05D006146 8.8e-27 123.6 102 59.8
Oeu017287.2 Olea europaea HOM05D004967 ORTHO05D006146 5.0e-22 107.8 102 51.0
CAN.G792.65 Capsicum annuum HOM05D004967 ORTHO05D006146 7.2e-21 104.0 107 50.5
MSTRG.1454 Avicennia marina HOM05D004967 ORTHO05D006146 1.6e-20 102.8 103 51.5
Lj1g0018094 Lotus japonicus HOM05D004967 ORTHO05D006146 2.1e-20 102.4 105 48.6
Sopen11g013380 Solanum pennellii HOM05D004967 ORTHO05D006146 2.1e-20 102.4 108 50.9
MELO3C008775.2 Cucumis melo HOM05D004967 ORTHO05D006146 2.7e-20 102.1 105 53.3
CsaV3_2G009340 Cucumis sativus L. HOM05D004967 ORTHO05D006146 2.7e-20 102.1 105 54.3
Solyc11g030390.2 Solanum lycopersicum HOM05D004967 ORTHO05D006146 3.6e-20 101.7 108 50.9
Ciclev10002109m.g Citrus clementina HOM05D004967 ORTHO05D006146 8.0e-20 100.5 121 46.3
Sopen11g013330 Solanum pennellii HOM05D004967 ORTHO05D006146 2.3e-19 99.0 108 49.1
Gorai.009G245200 Gossypium raimondii HOM05D004967 ORTHO05D006146 3.0e-19 98.6 109 49.5
Gohir.D05G236800 Gossypium hirsutum HOM05D004967 ORTHO05D006146 6.8e-19 97.4 109 49.5
Solyc11g030380.2 Solanum lycopersicum HOM05D004967 ORTHO05D006146 8.8e-19 97.1 108 48.1
Gohir.A05G234500 Gossypium hirsutum HOM05D004967 ORTHO05D006146 1.2e-18 96.7 109 48.6
Oeu050911.2 Olea europaea HOM05D004967 ORTHO05D006146 1.2e-18 96.7 109 45.9
Haze_00459 Corylus avellana HOM05D004967 ORTHO05D006146 1.5e-18 96.3 107 47.7
ClCG08G005580 Citrullus lanatus HOM05D004967 ORTHO05D006146 2.0e-18 95.9 104 50.0
Aa31LG6G9260 Aethionema arabicum HOM05D004967 ORTHO05D006146 2.6e-18 95.5 110 48.2
Rhsim06G0104700 Rhododendron simsii HOM05D004967 ORTHO05D006146 3.4e-18 95.1 100 50.0
Thecc.08G123500 Theobroma cacao HOM05D004967 ORTHO05D006146 3.4e-18 95.1 108 45.4
Cfa016003 Carpinus fangiana HOM05D004967 ORTHO05D006146 4.4e-18 94.7 107 47.7
Peaxi162Scf00688g00357 Petunia axillaris HOM05D004967 ORTHO05D006146 4.4e-18 94.7 102 50.0
Psat6g042000 Pisum sativum HOM05D004967 ORTHO05D006146 4.4e-18 94.7 107 46.7
TWI12G0727 Tripterygium wilfordii HOM05D004967 ORTHO05D006146 4.4e-18 94.7 111 45.9
Lalb_Chr04g0253391 Lupinus albus HOM05D004967 ORTHO05D006146 5.7e-18 94.4 100 49.0
THA.LOC104806820 Tarenaya hassleriana HOM05D004967 ORTHO05D006146 7.5e-18 94.0 107 48.6
Dinv40417 Davidia involucrata HOM05D004967 ORTHO05D006146 9.8e-18 93.6 107 46.7
THA.LOC104817267 Tarenaya hassleriana HOM05D004967 ORTHO05D006146 1.3e-17 93.2 111 44.1
unitig_22.g6736 Utricularia gibba HOM05D001808 ORTHO05D001747 1.7e-17 92.8 98 50.0
Atru.chr13.1436 Acer truncatum HOM05D004967 ORTHO05D006146 2.2e-17 92.4 110 48.2
Lalb_Chr10g0101781 Lupinus albus HOM05D004967 ORTHO05D006146 2.2e-17 92.4 105 46.7
Sabra02G0066300 Salix brachista HOM05D004967 ORTHO05D006146 2.2e-17 92.4 109 45.9
CANSAT54G0493 Cannabis sativa HOM05D004967 ORTHO05D006146 3.7e-17 91.7 107 45.8
CANSAT54G1838 Cannabis sativa HOM05D004967 ORTHO05D006146 3.7e-17 91.7 107 45.8
FAN15G1580 Fragaria x ananassa HOM05D004967 ORTHO05D006146 3.7e-17 91.7 110 44.5
Lj7C339G8 Lonicera japonica HOM05D004967 ORTHO05D006146 3.7e-17 91.7 102 44.1
Dinv07242 Davidia involucrata HOM05D004967 ORTHO05D006146 4.8e-17 91.3 107 46.7
Sed0005970 Sechium edule HOM05D004967 ORTHO05D006146 4.8e-17 91.3 105 49.5
CSS0015935 Camellia sinensis var. sinensis HOM05D004967 ORTHO05D006146 6.3e-17 90.9 104 47.1
CSS0022408 Camellia sinensis var. sinensis HOM05D004967 ORTHO05D006146 6.3e-17 90.9 104 47.1
Ca_12612_v3 Cicer arietinum L. HOM05D004967 ORTHO05D006146 6.3e-17 90.9 104 45.2
FAN27G2484 Fragaria x ananassa HOM05D004967 ORTHO05D006146 6.3e-17 90.9 105 45.7
Gorai.013G198200 Gossypium raimondii HOM05D004967 ORTHO05D006146 8.3e-17 90.5 106 48.1
ECA238G0202 Erigeron canadensis HOM05D004967 ORTHO05D006146 1.1e-16 90.1 102 47.1
COL.COLO4_35945 Corchorus olitorius HOM05D004967 ORTHO05D006146 1.4e-16 89.7 108 44.4
Thhalv10011651m.g Eutrema salsugineum HOM05D004967 ORTHO05D006146 1.8e-16 89.4 111 46.8
Lsat_1_v5_gn_2_72221 Lactuca sativa HOM05D004967 ORTHO05D006146 3.1e-16 88.6 114 46.5
Potri.002G084900 Populus trichocarpa HOM05D004967 ORTHO05D006146 3.1e-16 88.6 109 45.0
RcHm_v2.0_Chr6g0295611 Rosa chinensis HOM05D004967 ORTHO05D006146 3.1e-16 88.6 109 45.0
EL10Ac1g01046 Beta vulgaris HOM05D004967 ORTHO05D006146 5.4e-16 87.8 97 45.4
FvH4_2g26730 Fragaria vesca HOM05D004967 ORTHO05D006146 5.4e-16 87.8 109 43.1
FAN24G1575 Fragaria x ananassa HOM05D004967 ORTHO05D006146 5.4e-16 87.8 109 43.1
Sc23g0000730 Simmondsia chinensis HOM05D004967 ORTHO05D006146 7.0e-16 87.4 107 46.7
BraSC36t46077Z Brassica rapa HOM05D004967 ORTHO05D006146 9.1e-16 87.0 114 43.0
Duzib116G0335 Durio zibethinus HOM05D004967 ORTHO05D006146 9.1e-16 87.0 109 43.1
AL1G52430 Arabidopsis lyrata HOM05D004967 ORTHO05D006146 1.2e-15 86.7 112 44.6
Duzib093G0019 Durio zibethinus HOM05D004967 ORTHO05D006146 1.2e-15 86.7 117 41.9
MD15G1351500 Malus domestica HOM05D004967 ORTHO05D006146 1.2e-15 86.7 109 46.8
BcaB07g33933 Brassica carinata HOM05D004967 ORTHO05D006146 2.0e-15 85.9 115 41.7
QL09p035340 Quercus lobata HOM05D004967 ORTHO05D006146 2.0e-15 85.9 106 44.3
Carub.0001s3529 Capsella rubella HOM05D004967 ORTHO05D006146 2.7e-15 85.5 112 43.8
Eucgr.F03780 Eucalyptus grandis HOM05D004967 ORTHO05D006146 2.7e-15 85.5 110 42.7
arahy.Tifrunner.gnm1.ann1.T53UMC Arachis hypogaea HOM05D004967 ORTHO05D006146 3.5e-15 85.1 106 44.3
BcaC08g42866 Brassica carinata HOM05D004967 ORTHO05D006146 5.9e-15 84.3 114 41.2
C06p00760 Brassica napus HOM05D004967 ORTHO05D006146 5.9e-15 84.3 114 41.2
BolC6t35218H Brassica oleracea HOM05D004967 ORTHO05D006146 5.9e-15 84.3 114 41.2
CARHR036020 Cardamine hirsuta HOM05D004967 ORTHO05D006146 5.9e-15 84.3 114 42.1
Phvul.008G163800 Phaseolus vulgaris HOM05D004967 ORTHO05D006146 5.9e-15 84.3 103 46.6
AT1G44770 Arabidopsis thaliana HOM05D004967 ORTHO05D006146 7.7e-15 84.0 111 44.1
arahy.Tifrunner.gnm1.ann1.W41MX0 Arachis hypogaea HOM05D004967 ORTHO05D006146 7.7e-15 84.0 106 44.3
Aa31LG9G14250 Aethionema arabicum HOM05D004967 ORTHO05D006146 1.0e-14 83.6 107 40.2
Potri.005G176500 Populus trichocarpa HOM05D004967 ORTHO05D006146 1.0e-14 83.6 109 43.1
Sabra05G0133100 Salix brachista HOM05D004967 ORTHO05D006146 1.0e-14 83.6 109 44.0
Hund27025 Selenicereus undatus HOM05D004967 ORTHO05D006146 1.0e-14 83.6 111 43.2
A10p07360 Brassica napus HOM05D004967 ORTHO05D006146 1.3e-14 83.2 114 42.1
CSS0002296 Camellia sinensis var. sinensis HOM05D004967 ORTHO05D006146 1.3e-14 83.2 104 44.2
Manes.02G162100 Manihot esculenta HOM05D004967 ORTHO05D006146 1.3e-14 83.2 109 43.1
GSVIVG01008885001 Vitis vinifera HOM05D004967 ORTHO05D006146 1.3e-14 83.2 106 41.5
Ah.05g170880 Amaranthus hybridus HOM05D004967 ORTHO05D006146 1.7e-14 82.8 97 42.3
CSS0011461 Camellia sinensis var. sinensis HOM05D004967 ORTHO05D006146 1.7e-14 82.8 104 44.2
Sp1g33630 Schrenkiella parvula HOM05D004967 ORTHO05D006146 1.7e-14 82.8 113 44.2
DCAR_017414 Daucus carota HOM05D004967 ORTHO05D006146 2.2e-14 82.4 98 45.9
Eucgr.L02366 Eucalyptus grandis HOM05D004967 ORTHO05D006146 2.2e-14 82.4 112 40.2
Gohir.D01G181000 Gossypium hirsutum HOM05D004967 ORTHO05D006146 2.2e-14 82.4 106 43.4
Gorai.002G221500 Gossypium raimondii HOM05D004967 ORTHO05D006146 2.2e-14 82.4 106 43.4
Hund16853 Selenicereus undatus HOM05D004967 ORTHO05D006146 2.2e-14 82.4 110 41.8
MD08G1165700 Malus domestica HOM05D004967 ORTHO05D006146 2.9e-14 82.0 108 44.4
Glyma.13G080800 Glycine max HOM05D004967 ORTHO05D006146 5.0e-14 81.3 103 47.6
QL09p037225 Quercus lobata HOM05D004967 ORTHO05D006146 5.0e-14 81.3 104 43.3
Nitab4.5_0005272g0050 Nicotiana tabacum HOM05D004967 ORTHO05D006146 8.5e-14 80.5 108 40.7
Nitab4.5_0007033g0030 Nicotiana tabacum HOM05D004967 ORTHO05D006146 8.5e-14 80.5 108 40.7
PGR042G3942 Punica granatum HOM05D004967 ORTHO05D006146 1.1e-13 80.1 108 36.1
Cc00_g04290 Coffea canephora HOM05D004967 ORTHO05D006146 1.9e-13 79.3 115 40.9
TAR625G0546 Trochodendron aralioides HOM05D004967 ORTHO05D006146 1.9e-13 79.3 104 41.3
DCAR_003730 Daucus carota HOM05D004967 ORTHO05D006146 3.2e-13 78.6 105 44.8
PGSC0003DMG400022093 Solanum tuberosum HOM05D004967 ORTHO05D006146 7.2e-13 77.4 108 38.0
CiPaw.06G029300 Carya illinoinensis HOM05D004967 ORTHO05D006146 1.6e-12 76.3 107 43.0
Medtr1g030420 Medicago truncatula HOM05D004967 ORTHO05D006146 2.1e-12 75.9 113 40.7
AUR62027891 Chenopodium quinoa HOM05D004967 ORTHO05D006146 2.7e-12 75.5 108 39.8
Gohir.A01G188500 Gossypium hirsutum HOM05D004967 ORTHO05D006146 3.6e-12 75.1 106 40.6
Actinidia23071 Actinidia chinensis HOM05D004967 ORTHO05D006146 6.8e-11 70.9 116 36.2
Glyma.14G148500 Glycine max HOM05D004967 ORTHO05D006146 5.7e-10 67.8 103 40.8
CDE08G1235 Ceratophyllum demersum HOM05D004967 ORTHO05D006146 9.8e-10 67.0 105 39.0
Gorai.009G323800 Gossypium raimondii HOM05D004967 ORTHO05D006146 1.7e-09 66.2 106 38.7
PSO782G2864 Papaver somniferum HOM05D004967 ORTHO05D006146 2.8e-09 65.5 112 38.4
TAR376G0668 Trochodendron aralioides HOM05D004967 ORTHO05D006146 2.8e-09 65.5 101 37.6
HPP92_011156 Vanilla planifolia HOM05D004967 ORTHO05D006146 3.7e-09 65.1 105 37.1
AUR62019051 Chenopodium quinoa HOM05D004967 ORTHO05D006146 4.9e-09 64.7 138 31.2
Aqoxy6G00188 Aquilegia oxysepala HOM05D004967 ORTHO05D006146 5.4e-08 61.2 104 39.4
arahy.Tifrunner.gnm1.ann1.UMLE7H Arachis hypogaea HOM05D004967 ORTHO05D006146 5.4e-08 61.2 106 37.7
Dinv27328 Davidia involucrata HOM05D004967 ORTHO05D006146 5.4e-08 61.2 105 35.2
Gohir.D06G124400 Gossypium hirsutum HOM05D004967 ORTHO05D006146 9.2e-08 60.5 106 34.9
TAR625G0133 Trochodendron aralioides HOM05D004967 ORTHO05D006146 1.6e-07 59.7 97 38.1
PSO170G5727 Papaver somniferum HOM05D004967 ORTHO05D006146 2.7e-07 58.9 114 36.8
Os03g0701600 Oryza sativa ssp. japonica HOM05D004967 ORTHO05D006146 3.5e-07 58.5 108 32.4
TPR.G25780 Trifolium pratense HOM05D004967 ORTHO05D006146 5.9e-07 57.8 60 45.0
vmacro12539 Vaccinium macrocarpon HOM05D004967 ORTHO05D006146 2.3e-06 55.8 89 38.2
MBI06_g20715_MAGBIO Magnolia biondii HOM05D004967 ORTHO05D006146 3.8e-06 55.1 111 30.6
Cpa.g.sc36.53 Carica papaya HOM05D004967 ORTHO05D006146 5.0e-06 54.7 33 63.6


User provided reference genes

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