Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold106G30660 Striga asiatica HOM05D006030 ORTHO05D007475 7.0e-57 223.8 118 100.0
SGA_v2.0_scaffold51G18644 Striga asiatica HOM05D006030 ORTHO05D007475 7.1e-17 90.9 98 58.2
RcHm_v2.0_Chr5g0015101 Rosa chinensis HOM05D006030 ORTHO05D007475 2.1e-13 79.3 87 50.6
CSS0023088 Camellia sinensis var. sinensis HOM05D006030 ORTHO05D007475 1.4e-12 76.6 88 50.0
Prupe.4G087600 Prunus persica HOM05D006030 ORTHO05D007475 3.1e-12 75.5 110 43.6
Hma1.2p1_0689F.1_g203740 Hydrangea macrophylla HOM05D006030 ORTHO05D007475 5.3e-12 74.7 102 45.1
Dinv21492 Davidia involucrata HOM05D006030 ORTHO05D007475 6.9e-12 74.3 125 40.0
Atru.chr10.1031 Acer truncatum HOM05D006030 ORTHO05D007475 9.0e-12 73.9 91 48.4
MD10G1256000 Malus domestica HOM05D006030 ORTHO05D007475 9.0e-12 73.9 114 38.6
Actinidia39595 Actinidia chinensis HOM05D006030 ORTHO05D007475 1.5e-11 73.2 121 40.5
CSS0019216 Camellia sinensis var. sinensis HOM05D006030 ORTHO05D007475 1.5e-11 73.2 97 47.4
FAN16G0477 Fragaria x ananassa HOM05D006030 ORTHO05D007475 1.5e-11 73.2 87 47.1
FvH4_3g09520 Fragaria vesca HOM05D006030 ORTHO05D007475 2.0e-11 72.8 87 47.1
FAN11G1717 Fragaria x ananassa HOM05D006030 ORTHO05D007475 2.0e-11 72.8 87 47.1
MSTRG.14783 Avicennia marina HOM05D006030 ORTHO05D007475 3.4e-11 72.0 120 38.3
DCAR_027876 Daucus carota HOM05D006030 ORTHO05D007475 5.8e-11 71.2 85 50.6
Potri.011G091700 Populus trichocarpa HOM05D006030 ORTHO05D007475 5.8e-11 71.2 95 45.3
SalBow7G1462 Salvia bowleyana HOM05D006030 ORTHO05D007475 9.9e-11 70.5 99 45.5
SalBow7G3121 Salvia bowleyana HOM05D006030 ORTHO05D007475 9.9e-11 70.5 99 45.5
FAN21G0577 Fragaria x ananassa HOM05D006030 ORTHO05D007475 1.3e-10 70.1 87 46.0
FAN25G1233 Fragaria x ananassa HOM05D006030 ORTHO05D007475 1.3e-10 70.1 87 48.3
Lj2A324T65 Lonicera japonica HOM05D006030 ORTHO05D007475 1.3e-10 70.1 87 44.8
Ciclev10015995m.g Citrus clementina HOM05D006030 ORTHO05D007475 1.7e-10 69.7 119 38.7
ECA236G5152 Erigeron canadensis HOM05D006030 ORTHO05D007475 1.7e-10 69.7 113 39.8
MD05G1060100 Malus domestica HOM05D006030 ORTHO05D007475 1.7e-10 69.7 85 45.9
Aa31LG9G8890 Aethionema arabicum HOM05D006030 ORTHO05D007475 2.2e-10 69.3 84 48.8
Sabra11G0085900 Salix brachista HOM05D006030 ORTHO05D007475 2.2e-10 69.3 82 48.8
CANSAT35G1388 Cannabis sativa HOM05D006030 ORTHO05D007475 3.8e-10 68.6 116 40.5
VMungo0540G2189 Vigna mungo HOM05D006030 ORTHO05D007475 3.8e-10 68.6 84 45.2
Haze_05717 Corylus avellana HOM05D006030 ORTHO05D007475 4.9e-10 68.2 121 38.0
Nitab4.5_0008802g0020 Nicotiana tabacum HOM05D006030 ORTHO05D007475 6.4e-10 67.8 89 43.8
Thecc.02G010100 Theobroma cacao HOM05D006030 ORTHO05D007475 8.4e-10 67.4 85 47.1
Cpa.g.sc17.66 Carica papaya HOM05D006030 ORTHO05D007475 1.1e-09 67.0 110 40.9
Eucgr.E02463 Eucalyptus grandis HOM05D006030 ORTHO05D007475 1.1e-09 67.0 82 48.8
Nitab4.5_0000315g0160 Nicotiana tabacum HOM05D006030 ORTHO05D007475 1.1e-09 67.0 91 42.9
Sc05g0005830 Simmondsia chinensis HOM05D006030 ORTHO05D007475 1.1e-09 67.0 91 42.9
Ca_00520_v3 Cicer arietinum L. HOM05D006030 ORTHO05D007475 1.4e-09 66.6 86 43.0
MSTRG.13261 Avicennia marina HOM05D006030 ORTHO05D007475 1.9e-09 66.2 90 46.7
Cc09_g08600 Coffea canephora HOM05D006030 ORTHO05D007475 1.9e-09 66.2 130 39.2
MBI02_g11375_MAGBIO Magnolia biondii HOM05D006030 ORTHO05D007475 1.9e-09 66.2 89 43.8
TAR627G0722 Trochodendron aralioides HOM05D006030 ORTHO05D007475 1.9e-09 66.2 119 39.5
Carub.0006s3344 Capsella rubella HOM05D006030 ORTHO05D007475 2.4e-09 65.9 83 47.0
HanXRQChr04g0112111 Helianthus annuus HOM05D006030 ORTHO05D007475 2.4e-09 65.9 95 44.2
Sp6g03610 Schrenkiella parvula HOM05D006030 ORTHO05D007475 2.4e-09 65.9 122 39.3
AT4G03620 Arabidopsis thaliana HOM05D006030 ORTHO05D007475 3.2e-09 65.5 85 47.1
Cfa000873 Carpinus fangiana HOM05D006030 ORTHO05D007475 3.2e-09 65.5 119 39.5
CiPaw.09G117700 Carya illinoinensis HOM05D006030 ORTHO05D007475 3.2e-09 65.5 84 44.0
AL6G49160 Arabidopsis lyrata HOM05D006030 ORTHO05D007475 4.2e-09 65.1 83 45.8
A09p02880 Brassica napus HOM05D006030 ORTHO05D007475 4.2e-09 65.1 102 40.2
Duzib052G0461 Durio zibethinus HOM05D006030 ORTHO05D007475 4.2e-09 65.1 86 44.2
Glyma.15G092100 Glycine max HOM05D006030 ORTHO05D007475 4.2e-09 65.1 84 44.0
Nitab4.5_0000717g0050 Nicotiana tabacum HOM05D006030 ORTHO05D007475 4.2e-09 65.1 85 43.5
Solyc08g023270.3 Solanum lycopersicum HOM05D006030 ORTHO05D007475 4.2e-09 65.1 90 40.0
Sopen08g008180 Solanum pennellii HOM05D006030 ORTHO05D007475 4.2e-09 65.1 90 40.0
Peaxi162Scf00045g00235 Petunia axillaris HOM05D000253 ORTHO05D000149 5.5e-09 64.7 90 41.1
Thhalv10029201m.g Eutrema salsugineum HOM05D006030 ORTHO05D007475 7.1e-09 64.3 83 45.8
Manes.15G125900 Manihot esculenta HOM05D006030 ORTHO05D007475 7.1e-09 64.3 112 39.3
MBI18_g10587_MAGBIO Magnolia biondii HOM05D006030 ORTHO05D007475 9.3e-09 63.9 85 45.9
BcaB01g01909 Brassica carinata HOM05D006030 ORTHO05D007475 1.2e-08 63.5 83 44.6
TPR.G26249 Trifolium pratense HOM05D006030 ORTHO05D007475 1.2e-08 63.5 109 38.5
Aqoxy1G01654 Aquilegia oxysepala HOM05D006030 ORTHO05D007475 1.6e-08 63.2 83 49.4
BcaC04g23958 Brassica carinata HOM05D006030 ORTHO05D007475 1.6e-08 63.2 84 42.9
C09p02960 Brassica napus HOM05D006030 ORTHO05D007475 1.6e-08 63.2 84 42.9
BolC9t53223H Brassica oleracea HOM05D006030 ORTHO05D007475 1.6e-08 63.2 84 42.9
Phvul.006G167100 Phaseolus vulgaris HOM05D006030 ORTHO05D007475 2.1e-08 62.8 84 40.5
TWI09G0666 Tripterygium wilfordii HOM05D006030 ORTHO05D007475 2.1e-08 62.8 122 36.1
TAR624G0353 Trochodendron aralioides HOM05D006030 ORTHO05D007475 2.1e-08 62.8 120 35.8
CARHR252040 Cardamine hirsuta HOM05D006030 ORTHO05D007475 2.7e-08 62.4 84 44.0
Manes.17G075000 Manihot esculenta HOM05D006030 ORTHO05D007475 2.7e-08 62.4 81 44.4
Rhsim02G0159700 Rhododendron simsii HOM05D006030 ORTHO05D007475 2.7e-08 62.4 113 38.9
BraA09t35933Z Brassica rapa HOM05D006030 ORTHO05D007475 3.5e-08 62.0 84 41.7
HanXRQChr15g0481561 Helianthus annuus HOM05D006030 ORTHO05D007475 3.5e-08 62.0 95 41.1
Glyma.13G220300 Glycine max HOM05D006030 ORTHO05D007475 4.6e-08 61.6 115 39.1
Psat1g191320 Pisum sativum HOM05D006030 ORTHO05D007475 4.6e-08 61.6 85 40.0
CSS0008742 Camellia sinensis var. sinensis HOM05D006030 ORTHO05D007475 6.0e-08 61.2 86 40.7
Peaxi162Scf00333g00215 Petunia axillaris HOM05D006030 ORTHO05D007475 6.0e-08 61.2 90 40.0
Duzib132G1046 Durio zibethinus HOM05D006030 ORTHO05D007475 7.9e-08 60.8 127 35.4
arahy.Tifrunner.gnm1.ann1.IB7BS1 Arachis hypogaea HOM05D006030 ORTHO05D007475 1.0e-07 60.5 86 41.9
arahy.Tifrunner.gnm1.ann1.Z0KP5S Arachis hypogaea HOM05D006030 ORTHO05D007475 1.0e-07 60.5 86 41.9
CAN.G36.30 Capsicum annuum HOM05D006030 ORTHO05D007475 1.0e-07 60.5 90 37.8
Medtr2g018890 Medicago truncatula HOM05D006030 ORTHO05D007475 1.0e-07 60.5 116 34.5
PGSC0003DMG400005380 Solanum tuberosum HOM05D006030 ORTHO05D007475 1.0e-07 60.5 90 38.9
PSO541G2924 Papaver somniferum HOM05D006030 ORTHO05D007475 1.3e-07 60.1 95 38.9
Nitab4.5_0002900g0020 Nicotiana tabacum HOM05D006030 ORTHO05D007475 1.8e-07 59.7 90 37.8
Migut.H01344 Erythranthe guttata HOM05D006030 ORTHO05D007475 2.3e-07 59.3 112 34.8
Lalb_Chr20g0117731 Lupinus albus HOM05D006030 ORTHO05D007475 2.3e-07 59.3 108 37.0
THA.LOC104806979 Tarenaya hassleriana HOM05D006030 ORTHO05D007475 2.3e-07 59.3 119 34.5
COL.COLO4_17663 Corchorus olitorius HOM05D006030 ORTHO05D007475 3.9e-07 58.5 89 41.6
PSO675G1541 Papaver somniferum HOM05D006030 ORTHO05D007475 3.9e-07 58.5 90 38.9
PGR031G1516 Punica granatum HOM05D006030 ORTHO05D007475 3.9e-07 58.5 80 43.8
DCAR_003876 Daucus carota HOM05D006030 ORTHO05D007475 5.1e-07 58.2 96 40.6
DCAR_007858 Daucus carota HOM05D006030 ORTHO05D007475 5.1e-07 58.2 87 41.4
QL05p054330 Quercus lobata HOM05D006030 ORTHO05D007475 5.1e-07 58.2 84 44.0
Lj1A1167T61 Lonicera japonica HOM05D006030 ORTHO05D007475 6.7e-07 57.8 91 35.2
Lalb_Chr15g0086701 Lupinus albus HOM05D006030 ORTHO05D007475 8.7e-07 57.4 92 35.9
PGSC0003DMG400031336 Solanum tuberosum HOM05D006030 ORTHO05D007475 8.7e-07 57.4 97 36.1
CsaV3_1G036960 Cucumis sativus L. HOM05D006030 ORTHO05D007475 1.1e-06 57.0 120 32.5
Sopen02g005930 Solanum pennellii HOM05D006030 ORTHO05D007475 1.5e-06 56.6 102 35.3
TWI53G0643 Tripterygium wilfordii HOM05D006030 ORTHO05D007475 1.5e-06 56.6 85 40.0
Lalb_Chr18g0055221 Lupinus albus HOM05D006030 ORTHO05D007475 1.9e-06 56.2 112 32.1
Nn3g20281 Nelumbo nucifera HOM05D006030 ORTHO05D007475 5.6e-06 54.7 97 38.1


User provided reference genes

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