Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold1066G53824 Striga asiatica HOM05D004985 ORTHO05D005912 1.7e-120 436.0 217 100.0
SGA_v2.0_scaffold42G16037 Striga asiatica HOM05D004985 ORTHO05D005912 8.9e-66 254.2 167 79.6
MSTRG.9599 Avicennia marina HOM05D004985 ORTHO05D005912 9.3e-55 217.6 167 67.7
Migut.D01657 Erythranthe guttata HOM05D004985 ORTHO05D005912 2.7e-54 216.1 167 67.7
Oeu042721.3 Olea europaea HOM05D004985 ORTHO05D005912 3.3e-52 209.1 167 65.3
SalBow4G0956 Salvia bowleyana HOM05D004985 ORTHO05D005912 4.3e-52 208.8 167 67.7
Oeu014411.1 Olea europaea HOM05D004985 ORTHO05D005912 6.2e-51 204.9 167 62.9
MSTRG.15338 Avicennia marina HOM05D004985 ORTHO05D005912 2.0e-49 199.9 170 62.4
Dinv22782 Davidia involucrata HOM05D004985 ORTHO05D005912 5.8e-49 198.4 167 62.9
Hma1.2p1_0060F.1_g033100 Hydrangea macrophylla HOM05D004985 ORTHO05D005912 4.9e-48 195.3 167 62.9
PGSC0003DMG400030337 Solanum tuberosum HOM05D004985 ORTHO05D005912 3.5e-46 189.1 168 61.9
Atru.chr9.579 Acer truncatum HOM05D004985 ORTHO05D005912 6.0e-46 188.3 167 59.3
Sopen06g032910 Solanum pennellii HOM05D004985 ORTHO05D005912 7.9e-46 188.0 168 61.3
Solyc06g076510.3 Solanum lycopersicum HOM05D004985 ORTHO05D005912 1.0e-45 187.6 168 61.3
Potri.012G066200 Populus trichocarpa HOM05D004985 ORTHO05D005912 3.0e-45 186.0 167 58.1
MELO3C017224.2 Cucumis melo HOM05D004985 ORTHO05D005912 3.9e-45 185.7 167 59.3
QL10p019503 Quercus lobata HOM05D004985 ORTHO05D005912 5.1e-45 185.3 167 60.5
Nitab4.5_0000744g0020 Nicotiana tabacum HOM05D004985 ORTHO05D005912 6.7e-45 184.9 168 61.3
CiPaw.11G053300 Carya illinoinensis HOM05D004985 ORTHO05D005912 1.5e-44 183.7 167 58.1
Haze_07724 Corylus avellana HOM05D004985 ORTHO05D005912 1.5e-44 183.7 168 60.7
Nitab4.5_0004739g0030 Nicotiana tabacum HOM05D004985 ORTHO05D005912 1.5e-44 183.7 167 61.7
TAR374G0278 Trochodendron aralioides HOM05D004985 ORTHO05D005912 1.9e-44 183.3 167 59.9
CAN.G394.86 Capsicum annuum HOM05D004985 ORTHO05D005912 3.3e-44 182.6 169 58.6
CSS0016421 Camellia sinensis var. sinensis HOM05D004985 ORTHO05D005912 4.3e-44 182.2 167 58.1
CSS0040501 Camellia sinensis var. sinensis HOM05D004985 ORTHO05D005912 4.3e-44 182.2 167 58.1
Ciclev10021430m.g Citrus clementina HOM05D004985 ORTHO05D005912 5.6e-44 181.8 167 57.5
vmacro17610 Vaccinium macrocarpon HOM05D004985 ORTHO05D005912 5.6e-44 181.8 168 60.1
ClCG06G015640 Citrullus lanatus HOM05D004985 ORTHO05D005912 2.1e-43 179.9 167 58.1
Sabra12G0048600 Salix brachista HOM05D004985 ORTHO05D005912 2.8e-43 179.5 167 58.1
CSS0005049 Camellia sinensis var. sinensis HOM05D003672 ORTHO05D005912 3.6e-43 179.1 175 57.1
CsaV3_1G002920 Cucumis sativus L. HOM05D004985 ORTHO05D005912 4.8e-43 178.7 167 57.5
Duzib205G0214 Durio zibethinus HOM05D004985 ORTHO05D005912 4.8e-43 178.7 167 56.9
Eucgr.K02531 Eucalyptus grandis HOM05D004985 ORTHO05D005912 4.8e-43 178.7 168 58.9
Peaxi162Scf00481g00631 Petunia axillaris HOM05D004985 ORTHO05D005912 6.2e-43 178.3 169 59.8
Rhsim08G0146000 Rhododendron simsii HOM05D004985 ORTHO05D005912 1.1e-42 177.6 170 59.4
Cc09_g09310 Coffea canephora HOM05D004985 ORTHO05D005912 1.8e-42 176.8 168 56.5
Actinidia04825 Actinidia chinensis HOM05D004985 ORTHO05D004228 4.0e-42 175.6 170 57.6
Prupe.5G205100 Prunus persica HOM05D004985 ORTHO05D005912 4.0e-42 175.6 168 57.1
PSO017G5703 Papaver somniferum HOM05D004985 ORTHO05D005912 5.3e-42 175.3 127 67.7
Sed0020095 Sechium edule HOM05D004985 ORTHO05D005912 9.0e-42 174.5 167 55.7
Nitab4.5_0000116g0440 Nicotiana tabacum HOM05D004985 ORTHO05D005912 1.2e-41 174.1 167 59.9
Manes.14G085700 Manihot esculenta HOM05D004985 ORTHO05D005912 1.5e-41 173.7 167 55.1
Thecc.03G101800 Theobroma cacao HOM05D004985 ORTHO05D005912 1.5e-41 173.7 149 59.7
PGR044G1445 Punica granatum HOM05D004985 ORTHO05D005912 2.0e-41 173.3 167 53.9
TWI31G1299 Tripterygium wilfordii HOM05D004985 ORTHO05D005912 2.0e-41 173.3 127 67.7
Cpa.g.sc94.56 Carica papaya HOM05D004985 ORTHO05D005912 2.6e-41 172.9 170 56.5
COL.COLO4_06857 Corchorus olitorius HOM05D004985 ORTHO05D005912 3.4e-41 172.6 167 55.1
Glyma.04G162700 Glycine max HOM05D004985 ORTHO05D005912 4.5e-41 172.2 167 58.1
PSO478G5014 Papaver somniferum HOM05D004985 ORTHO05D005912 4.5e-41 172.2 127 66.9
TPR.G12221 Trifolium pratense HOM05D004985 ORTHO05D005912 4.5e-41 172.2 169 56.2
Hund02586 Selenicereus undatus HOM05D004985 ORTHO05D005912 7.6e-41 171.4 170 52.9
Aqoxy3G03694 Aquilegia oxysepala HOM05D004985 ORTHO05D005912 1.3e-40 170.6 169 56.2
arahy.Tifrunner.gnm1.ann1.B21894 Arachis hypogaea HOM05D004985 ORTHO05D005912 1.7e-40 170.2 170 55.9
Haze_18480 Corylus avellana HOM05D004985 ORTHO05D005912 1.7e-40 170.2 148 59.5
arahy.Tifrunner.gnm1.ann1.XT1KNI Arachis hypogaea HOM05D004985 ORTHO05D005912 2.2e-40 169.9 173 54.3
RcHm_v2.0_Chr7g0183091 Rosa chinensis HOM05D004985 ORTHO05D005912 2.2e-40 169.9 167 54.5
FAN13G1687 Fragaria x ananassa HOM05D004985 ORTHO05D005912 2.9e-40 169.5 170 55.9
Gohir.A07G068600 Gossypium hirsutum HOM05D004985 ORTHO05D005912 3.8e-40 169.1 168 53.6
Psat5g208200 Pisum sativum HOM05D004985 ORTHO05D005912 3.8e-40 169.1 171 55.6
GSVIVG01007867001 Vitis vinifera HOM05D004985 ORTHO05D005912 3.8e-40 169.1 171 56.1
AUR62008533 Chenopodium quinoa HOM05D004985 ORTHO05D005912 4.9e-40 168.7 170 54.7
FAN08G1159 Fragaria x ananassa HOM05D004985 ORTHO05D005912 4.9e-40 168.7 170 57.6
Gohir.D07G073100 Gossypium hirsutum HOM05D004985 ORTHO05D005912 4.9e-40 168.7 168 53.6
Gorai.001G077300 Gossypium raimondii HOM05D004985 ORTHO05D005912 4.9e-40 168.7 168 53.6
Ca_14341_v3 Cicer arietinum L. HOM05D004985 ORTHO05D005912 6.4e-40 168.3 170 55.9
AUR62021560 Chenopodium quinoa HOM05D004985 ORTHO05D005912 8.4e-40 167.9 167 54.5
ECA232G4926 Erigeron canadensis HOM05D004985 ORTHO05D005912 8.4e-40 167.9 167 56.3
DCAR_029981 Daucus carota HOM05D004985 ORTHO05D005912 1.4e-39 167.2 168 57.7
FvH4_5g13840 Fragaria vesca HOM05D004985 ORTHO05D005912 1.4e-39 167.2 170 55.9
FAN18G1860 Fragaria x ananassa HOM05D004985 ORTHO05D005912 1.4e-39 167.2 170 55.3
Lsat_1_v5_gn_2_122560 Lactuca sativa HOM05D004985 ORTHO05D005912 1.9e-39 166.8 167 55.7
Manes.06G084800 Manihot esculenta HOM05D004985 ORTHO05D005912 2.4e-39 166.4 122 68.0
Nn3g17450 Nelumbo nucifera HOM05D004985 ORTHO05D005912 3.2e-39 166.0 167 55.7
THA.LOC104812106 Tarenaya hassleriana HOM05D004985 ORTHO05D005912 3.2e-39 166.0 163 55.8
Glyma.06G203300 Glycine max HOM05D004985 ORTHO05D005912 5.5e-39 165.2 168 55.4
Phvul.010G007300 Phaseolus vulgaris HOM05D004985 ORTHO05D005912 5.5e-39 165.2 170 55.3
Lj1g0020192 Lotus japonicus HOM05D004985 ORTHO05D005912 1.2e-38 164.1 167 55.1
Nn4g23424 Nelumbo nucifera HOM05D004985 ORTHO05D005912 1.2e-38 164.1 167 56.9
VMungo0331G0044 Vigna mungo HOM05D004985 ORTHO05D005912 1.6e-38 163.7 170 55.9
CANSAT35G1156 Cannabis sativa HOM05D004985 ORTHO05D005912 2.1e-38 163.3 120 71.7
MBI19_g00634_MAGBIO Magnolia biondii HOM05D004985 ORTHO05D005912 2.7e-38 162.9 113 74.3
MD14G1211600 Malus domestica HOM05D004985 ORTHO05D005912 4.6e-38 162.2 115 73.9
Thhalv10008334m.g Eutrema salsugineum HOM05D004985 ORTHO05D005912 6.0e-38 161.8 126 63.5
HanXRQChr09g0270221 Helianthus annuus HOM05D004985 ORTHO05D005912 1.3e-37 160.6 123 65.9
Lj1g0027941 Lotus japonicus HOM05D004985 ORTHO05D005912 1.3e-37 160.6 169 56.8
Medtr3g025840 Medicago truncatula HOM05D004985 ORTHO05D005912 2.3e-37 159.8 123 62.6
Sed0001113 Sechium edule HOM05D004985 ORTHO05D005912 3.0e-37 159.5 167 54.5
A08p30280 Brassica napus HOM05D004985 ORTHO05D005912 5.1e-37 158.7 170 52.4
Aa31LG7G3400 Aethionema arabicum HOM05D004985 ORTHO05D005912 8.7e-37 157.9 125 64.0
A06p14760 Brassica napus HOM05D004985 ORTHO05D005912 1.1e-36 157.5 126 61.1
BraA06t24599Z Brassica rapa HOM05D004985 ORTHO05D005912 2.5e-36 156.4 126 61.1
C08p18810 Brassica napus HOM05D004985 ORTHO05D005912 3.3e-36 156.0 125 63.2
HPP92_012184 Vanilla planifolia HOM05D004985 ORTHO05D005912 3.3e-36 156.0 125 63.2
AT1G18640 Arabidopsis thaliana HOM05D004985 ORTHO05D005912 4.3e-36 155.6 125 60.8
Sp1g16610 Schrenkiella parvula HOM05D004985 ORTHO05D005912 4.3e-36 155.6 147 56.5
BcaB07g31884 Brassica carinata HOM05D004985 ORTHO05D005912 5.6e-36 155.2 126 60.3
AL1G31080 Arabidopsis lyrata HOM05D004985 ORTHO05D005912 7.4e-36 154.8 125 60.8
BcaC05g25759 Brassica carinata HOM05D004985 ORTHO05D005912 9.6e-36 154.5 126 59.5
C05p16910 Brassica napus HOM05D004985 ORTHO05D005912 9.6e-36 154.5 126 59.5
BolC5t30393H Brassica oleracea HOM05D004985 ORTHO05D005912 9.6e-36 154.5 126 59.5
TPR.G28540 Trifolium pratense HOM05D004985 ORTHO05D005912 1.3e-35 154.1 127 62.2
Carub.0001s1827 Capsella rubella HOM05D004985 ORTHO05D005912 1.6e-35 153.7 126 59.5
BcaC07g38933 Brassica carinata HOM05D004985 ORTHO05D005912 2.1e-35 153.3 125 62.4
BolC8t49507H Brassica oleracea HOM05D004985 ORTHO05D005912 2.1e-35 153.3 125 62.4
MD06G1202500 Malus domestica HOM05D004985 ORTHO05D005912 2.8e-35 152.9 114 71.9
unitig_60.g25411 Utricularia gibba HOM05D004985 ORTHO05D005912 2.8e-35 152.9 144 56.9
Carub.0007s3048 Capsella rubella HOM05D004985 ORTHO05D005912 4.8e-35 152.1 126 58.7
CARHR019270 Cardamine hirsuta HOM05D004985 ORTHO05D005912 4.8e-35 152.1 127 63.0
TWI79G1560 Tripterygium wilfordii HOM05D004985 ORTHO05D005912 1.1e-34 151.0 101 73.3
Actinidia16126 Actinidia chinensis HOM05D003322 ORTHO05D005912 6.9e-34 148.3 168 51.8
Sc10g0009710 Simmondsia chinensis HOM05D004985 ORTHO05D005912 1.3e-32 144.1 127 59.8
CDE06G0240 Ceratophyllum demersum HOM05D004985 ORTHO05D005912 2.9e-32 142.9 113 66.4
Lalb_Chr12g0197201 Lupinus albus HOM05D004985 ORTHO05D005912 9.3e-31 137.9 99 69.7
Zm00001eb166440 Zea mays HOM05D004985 ORTHO05D005912 1.2e-30 137.5 167 49.7
Os12g0502400 Oryza sativa ssp. japonica HOM05D004985 ORTHO05D005912 2.1e-30 136.7 127 58.3
BraA08t34961Z Brassica rapa HOM05D004985 ORTHO05D005912 2.7e-30 136.3 93 71.0
EL10Ac8g18666 Beta vulgaris HOM05D004985 ORTHO05D005912 1.8e-29 133.7 79 77.2
ATR0681G325 Amborella trichopoda HOM05D004985 ORTHO05D005912 6.7e-29 131.7 84 77.4
Os11g0629500 Oryza sativa ssp. japonica HOM05D004985 ORTHO05D005912 1.1e-28 131.0 128 57.8
SEGI_10948 Sequoiadendron giganteum HOM05D004985 ORTHO05D005912 7.4e-28 128.3 79 77.2
Peaxi162Scf00086g01110 Petunia axillaris HOM05D004985 ORTHO05D005912 4.8e-27 125.6 171 48.0
Duzib084G0347 Durio zibethinus HOM05D004985 ORTHO05D005912 6.3e-27 125.2 147 46.9
Mapoly0023s0019 Marchantia polymorpha HOM05D004985 ORTHO05D005912 6.3e-27 125.2 79 77.2
Pp3c8_16890 Physcomitrium patens HOM05D004985 ORTHO05D005912 1.1e-26 124.4 93 66.7
AUR62008530 Chenopodium quinoa HOM05D004985 ORTHO05D005912 1.4e-26 124.0 167 45.5
AagrBONN_evm.TU.Sc2ySwM_117.3039 Anthoceros agrestis HOM05D004985 ORTHO05D005912 1.8e-26 123.6 78 76.9
Cfa004103 Carpinus fangiana HOM05D004985 ORTHO05D005912 2.4e-26 123.2 161 46.6
Cc11_g04830 Coffea canephora HOM05D004985 ORTHO05D005912 4.1e-26 122.5 122 54.9
AagrBONN_evm.TU.Sc2ySwM_228.2773 Anthoceros agrestis HOM05D004985 ORTHO05D005912 1.5e-25 120.6 78 74.4
SMO137G0315 Selaginella moellendorffii HOM05D004985 ORTHO05D005912 3.4e-25 119.4 79 69.6
TAR622G1020 Trochodendron aralioides HOM05D004985 ORTHO05D005912 8.5e-24 114.8 61 90.2
PRCOL_00003809 Prasinoderma coloniale HOM05D004985 ORTHO05D005912 1.6e-22 110.5 89 62.9
CDE07G0155 Ceratophyllum demersum HOM05D004985 ORTHO05D005912 6.9e-18 95.1 123 43.1
MCO16G297 Micromonas commoda HOM05D004985 ORTHO05D005912 4.2e-15 85.9 79 54.4
SHI27080 Sapria himalayana HOM05D004985 ORTHO05D005912 1.6e-14 84.0 87 52.9
Cre04.g217955 Chlamydomonas reinhardtii HOM05D004985 ORTHO05D005912 2.3e-13 80.1 73 54.8
Cre04.g217959 Chlamydomonas reinhardtii HOM05D004985 ORTHO05D005912 2.3e-13 80.1 73 54.8
Cre01.g053000 Chlamydomonas reinhardtii HOM05D004424 ORTHO05D005476 1.3e-11 74.3 78 44.9
Cre10.g421700 Chlamydomonas reinhardtii HOM05D004424 ORTHO05D005476 1.3e-11 74.3 79 46.8
Cre01.g053150 Chlamydomonas reinhardtii HOM05D004424 ORTHO05D005476 6.3e-11 72.0 78 43.6


User provided reference genes

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