Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold105G30510 Striga asiatica HOM05D004031 ORTHO05D006678 0.0e+00 1352.0 710 100.0
MSTRG.19923 Avicennia marina HOM05D004031 ORTHO05D006678 1.5e-303 1045.8 742 73.9
Migut.J01861 Erythranthe guttata HOM05D004031 ORTHO05D006678 7.7e-300 1033.5 712 75.0
SalBow6G5892 Salvia bowleyana HOM05D004031 ORTHO05D006678 3.5e-284 981.5 768 69.4
Oeu057586.3 Olea europaea HOM05D004031 ORTHO05D006678 7.5e-279 963.8 754 67.6
GSVIVG01033461001 Vitis vinifera HOM05D004031 ORTHO05D006678 1.5e-271 939.5 713 67.9
Dinv16349 Davidia involucrata HOM05D004031 ORTHO05D006678 1.2e-268 929.9 710 67.6
Hma1.2p1_0124F.1_g058320 Hydrangea macrophylla HOM05D004031 ORTHO05D006678 1.0e-264 916.8 720 65.3
CSS0004189 Camellia sinensis var. sinensis HOM05D004031 ORTHO05D006678 2.4e-261 905.6 755 62.9
Dinv24047 Davidia involucrata HOM05D004031 ORTHO05D006678 5.6e-258 894.4 721 65.7
CiPaw.10G024900 Carya illinoinensis HOM05D004031 ORTHO05D006678 1.2e-255 886.7 761 61.9
Manes.09G038300 Manihot esculenta HOM05D004031 ORTHO05D006678 1.2e-255 886.7 755 61.3
Cfa020139 Carpinus fangiana HOM05D004031 ORTHO05D006678 1.9e-253 879.4 761 60.8
Cc06_g15550 Coffea canephora HOM05D004031 ORTHO05D006678 2.4e-253 879.0 758 61.7
vmacro22628 Vaccinium macrocarpon HOM05D004031 ORTHO05D006678 2.0e-252 875.9 787 60.4
RcHm_v2.0_Chr3g0479121 Rosa chinensis HOM05D004031 ORTHO05D006678 1.0e-251 873.6 741 62.5
Sc13g0002440 Simmondsia chinensis HOM05D004031 ORTHO05D006678 1.0e-251 873.6 729 62.1
TAR623G1150 Trochodendron aralioides HOM05D004031 ORTHO05D006678 2.3e-251 872.5 776 58.6
CiPaw.09G027800 Carya illinoinensis HOM05D004031 ORTHO05D006678 3.0e-251 872.1 749 61.3
FvH4_6g21770 Fragaria vesca HOM05D004031 ORTHO05D006678 6.6e-251 870.9 735 61.6
HanXRQChr13g0398361 Helianthus annuus HOM05D004031 ORTHO05D006678 3.3e-250 868.6 734 61.6
Prupe.7G082700 Prunus persica HOM05D004031 ORTHO05D006678 2.1e-249 865.9 753 60.7
CAN.G454.1 Capsicum annuum HOM05D004031 ORTHO05D006678 3.1e-248 862.1 750 60.7
ECA233G4423 Erigeron canadensis HOM05D004031 ORTHO05D006678 4.0e-248 861.7 732 62.2
MD12G1054100 Malus domestica HOM05D004031 ORTHO05D006678 8.9e-248 860.5 758 60.6
Nitab4.5_0007281g0010 Nicotiana tabacum HOM05D004031 ORTHO05D006678 8.9e-248 860.5 754 60.5
Sopen03g011490 Solanum pennellii HOM05D004031 ORTHO05D006678 9.8e-247 857.1 750 61.9
Lj1g0024200 Lotus japonicus HOM05D004031 ORTHO05D006678 1.4e-245 853.2 733 60.7
Thecc.05G175900 Theobroma cacao HOM05D004031 ORTHO05D006678 3.2e-245 852.0 750 59.3
CANSAT64G2464 Cannabis sativa HOM05D004031 ORTHO05D006678 7.1e-245 850.9 757 58.9
MD14G1053000 Malus domestica HOM05D004031 ORTHO05D006678 1.2e-244 850.1 753 59.1
Glyma.03G147000 Glycine max HOM05D004031 ORTHO05D006678 1.3e-243 846.7 740 60.0
Lalb_Chr15g0079131 Lupinus albus HOM05D004031 ORTHO05D006678 1.7e-243 846.3 723 59.9
Phvul.001G144700 Phaseolus vulgaris HOM05D004031 ORTHO05D006678 2.3e-243 845.9 724 60.8
Potri.016G060500 Populus trichocarpa HOM05D004031 ORTHO05D006678 3.0e-243 845.5 751 60.5
FAN05G0520 Fragaria x ananassa HOM05D004031 ORTHO05D006678 6.6e-243 844.3 794 57.4
Gohir.D01G124700 Gossypium hirsutum HOM05D004031 ORTHO05D006678 4.3e-242 841.6 732 58.9
PGR142G3960 Punica granatum HOM05D004031 ORTHO05D006678 5.6e-242 841.3 749 59.5
Gohir.A01G137300 Gossypium hirsutum HOM05D004031 ORTHO05D006678 7.3e-242 840.9 732 59.2
Gorai.002G155200 Gossypium raimondii HOM05D004031 ORTHO05D006678 9.5e-242 840.5 732 59.0
Nn7g35952 Nelumbo nucifera HOM05D004031 ORTHO05D006678 1.6e-241 839.7 773 57.3
Glyma.19G150400 Glycine max HOM05D004031 ORTHO05D006678 2.1e-241 839.3 765 57.9
Lsat_1_v5_gn_6_36500 Lactuca sativa HOM05D004031 ORTHO05D006678 2.1e-241 839.3 707 61.7
FAN09G1850 Fragaria x ananassa HOM05D004031 ORTHO05D006678 1.4e-240 836.6 768 58.5
TWI74G0357 Tripterygium wilfordii HOM05D004031 ORTHO05D006678 1.8e-240 836.3 746 59.9
Ca_08544_v3 Cicer arietinum L. HOM05D004031 ORTHO05D006678 6.8e-240 834.3 731 59.4
Potri.006G195000 Populus trichocarpa HOM05D004031 ORTHO05D006678 7.6e-239 830.9 710 61.5
TPR.G13372 Trifolium pratense HOM05D004031 ORTHO05D006678 7.6e-239 830.9 722 60.1
Rhsim03G0003600 Rhododendron simsii HOM05D004031 ORTHO05D006678 1.7e-238 829.7 768 59.1
Aqoxy1G00041 Aquilegia oxysepala HOM05D004031 ORTHO05D006678 1.1e-237 827.0 722 59.8
Eucgr.K01855 Eucalyptus grandis HOM05D004031 ORTHO05D006678 5.4e-237 824.7 744 58.1
Medtr7g093740 Medicago truncatula HOM05D004031 ORTHO05D006678 5.4e-237 824.7 713 60.0
arahy.Tifrunner.gnm1.ann1.YX753W Arachis hypogaea HOM05D004031 ORTHO05D006678 6.0e-236 821.2 733 58.3
AUR62012010 Chenopodium quinoa HOM05D004031 ORTHO05D006678 1.3e-235 820.1 718 58.9
Psat3g066880 Pisum sativum HOM05D004031 ORTHO05D006678 3.9e-235 818.5 731 58.5
EL10Ac3g06876 Beta vulgaris HOM05D004031 ORTHO05D006678 7.3e-234 814.3 741 56.4
Ciclev10013737m.g Citrus clementina HOM05D004031 ORTHO05D006678 1.2e-233 813.5 737 58.8
DCAR_009690 Daucus carota HOM05D004031 ORTHO05D006678 2.1e-233 812.8 766 56.8
arahy.Tifrunner.gnm1.ann1.4B2YIP Arachis hypogaea HOM05D004031 ORTHO05D006678 1.1e-232 810.4 761 56.5
Sabra16G0063400 Salix brachista HOM05D004031 ORTHO05D006678 1.6e-228 796.6 737 58.6
MBI13_g29636_MAGBIO Magnolia biondii HOM05D004031 ORTHO05D006678 7.3e-226 787.7 762 54.6
MELO3C009604.2 Cucumis melo HOM05D004031 ORTHO05D006678 1.6e-225 786.6 728 57.1
VMungo1383G1586 Vigna mungo HOM05D004031 ORTHO05D006678 6.2e-225 784.6 673 61.1
Sed0017241 Sechium edule HOM05D004031 ORTHO05D006678 1.1e-224 783.9 724 56.5
Atru.chr8.1164 Acer truncatum HOM05D004031 ORTHO05D006678 6.9e-224 781.2 758 56.1
FAN02G1852 Fragaria x ananassa HOM05D004031 ORTHO05D006678 1.2e-223 780.4 806 54.1
Actinidia32416 Actinidia chinensis HOM05D004031 ORTHO05D006678 1.4e-221 773.5 712 58.6
THA.LOC104799283 Tarenaya hassleriana HOM05D004031 ORTHO05D006678 3.5e-220 768.8 706 56.7
PSO339G3947 Papaver somniferum HOM05D004031 ORTHO05D006678 1.9e-218 763.1 747 54.5
Sabra06G0149700 Salix brachista HOM05D004031 ORTHO05D006678 7.4e-218 761.1 751 55.9
PSO384G3799 Papaver somniferum HOM05D004031 ORTHO05D006678 5.8e-215 751.5 747 54.1
CARHR086570 Cardamine hirsuta HOM05D004031 ORTHO05D006678 2.2e-214 749.6 695 57.0
ATR0598G228 Amborella trichopoda HOM05D004031 ORTHO05D006678 6.4e-214 748.0 764 51.7
Lju124A22T15 Lonicera japonica HOM05D004031 ORTHO05D006678 6.4e-214 748.0 732 56.8
Lj1A1132T32 Lonicera japonica HOM05D004031 ORTHO05D006678 7.1e-213 744.6 732 56.8
AUR62015326 Chenopodium quinoa HOM05D004031 ORTHO05D006678 1.6e-212 743.4 684 57.6
AT3G12010 Arabidopsis thaliana HOM05D004031 ORTHO05D006678 4.6e-212 741.9 703 56.2
Aa31LG3G5440 Aethionema arabicum HOM05D004031 ORTHO05D006678 3.0e-211 739.2 697 55.2
Carub.0003s1135 Capsella rubella HOM05D004031 ORTHO05D006678 5.6e-210 734.9 703 54.8
HPP92_024784 Vanilla planifolia HOM05D004031 ORTHO05D006678 4.0e-208 728.8 763 51.9
BcaB04g18697 Brassica carinata HOM05D004031 ORTHO05D006678 5.3e-208 728.4 703 54.6
Sp3g10240 Schrenkiella parvula HOM05D004031 ORTHO05D006678 2.0e-207 726.5 702 55.1
BcaC01g04064 Brassica carinata HOM05D004031 ORTHO05D006678 1.1e-205 720.7 703 54.3
Os10g0400900 Oryza sativa ssp. japonica HOM05D004031 ORTHO05D006678 8.7e-203 711.1 711 51.9
Haze_20030 Corylus avellana HOM05D004031 ORTHO05D006678 4.3e-202 708.8 923 46.5
C03p45440 Brassica napus HOM05D004031 ORTHO05D006678 3.4e-199 699.1 703 53.3
BolC3t16811H Brassica oleracea HOM05D004031 ORTHO05D006678 9.3e-197 691.0 733 51.6
A03p37440 Brassica napus HOM05D004031 ORTHO05D006678 2.7e-196 689.5 702 53.3
unitig_21.g20577 Utricularia gibba HOM05D004031 ORTHO05D006678 1.4e-192 677.2 679 55.1
CDE05G0445 Ceratophyllum demersum HOM05D004031 ORTHO05D006678 3.1e-192 676.0 717 51.0
Solyc03g053010.4 Solanum lycopersicum HOM05D004031 ORTHO05D006678 3.3e-186 656.0 619 59.1
Sed0010020 Sechium edule HOM05D004031 ORTHO05D006678 8.5e-182 641.3 716 50.4
FAN14G1892 Fragaria x ananassa HOM05D004031 ORTHO05D006678 1.8e-179 633.6 633 54.3
Hma1.2p1_0124F.1_g058310 Hydrangea macrophylla HOM05D004031 ORTHO05D006678 5.3e-176 622.1 434 69.8
Pp3c6_28540 Physcomitrium patens HOM05D004031 ORTHO05D006678 8.0e-172 608.2 733 46.2
Mapoly0005s0167 Marchantia polymorpha HOM05D004031 ORTHO05D006678 4.8e-169 599.0 826 42.3
BraA03t12904Z Brassica rapa HOM05D004031 ORTHO05D006678 6.3e-169 598.6 682 49.3
BcaC05g29296 Brassica carinata HOM05D004031 ORTHO05D006678 5.3e-168 595.5 715 48.4
C05p55790 Brassica napus HOM05D004031 ORTHO05D006678 5.3e-168 595.5 715 48.4
BolC5t34246H Brassica oleracea HOM05D004031 ORTHO05D006678 5.3e-168 595.5 715 48.4
AL3G23620 Arabidopsis lyrata HOM05D004031 ORTHO05D006678 2.2e-161 573.5 558 56.1
Peaxi162Scf00463g00518 Petunia axillaris HOM05D004031 ORTHO05D006678 1.2e-154 551.2 610 52.6
SMO143G0277 Selaginella moellendorffii HOM05D004031 ORTHO05D006678 4.4e-154 549.3 702 42.9
Zm00001eb048600 Zea mays HOM05D004031 ORTHO05D006678 1.3e-153 547.7 574 49.1
Aa31LG3G5500 Aethionema arabicum HOM05D004031 ORTHO05D006678 8.9e-147 525.0 433 59.8
ClCG10G017700 Citrullus lanatus HOM05D004031 ORTHO05D006678 2.9e-145 520.0 388 65.2
CsaV3_3G038610 Cucumis sativus L. HOM05D004031 ORTHO05D006678 1.8e-144 517.3 539 53.4
QL07p024699 Quercus lobata HOM05D004031 ORTHO05D006678 2.6e-138 496.9 501 55.5
Nitab4.5_0000009g0250 Nicotiana tabacum HOM05D004031 ORTHO05D006678 1.9e-136 490.7 489 56.2
Thhalv10020623m.g Eutrema salsugineum HOM05D004031 ORTHO05D006678 1.0e-134 485.0 505 54.1
SEGI_16646 Sequoiadendron giganteum HOM05D004031 ORTHO05D006678 1.5e-106 391.3 573 41.5
QL07p024684 Quercus lobata HOM05D004031 ORTHO05D006678 5.8e-106 389.4 260 71.2
SHI31751 Sapria himalayana HOM05D004031 ORTHO05D006678 3.1e-99 367.1 482 46.9
Psat7g023080 Pisum sativum HOM05D004031 ORTHO05D006678 5.3e-75 286.6 363 45.2
Cpa.g.sc85.42 Carica papaya HOM05D004031 ORTHO05D006678 3.3e-69 267.3 194 64.4
TAR623G0223 Trochodendron aralioides HOM05D004031 ORTHO05D006678 6.3e-68 263.1 168 76.2
Cpa.g.c40176 Carica papaya HOM05D004031 ORTHO05D006678 1.8e-67 261.5 219 64.4
CSS0030127 Camellia sinensis var. sinensis HOM05D004031 ORTHO05D006678 1.8e-54 218.4 161 67.1
Peaxi162Scf00463g00519 Petunia axillaris HOM05D004031 ORTHO05D006678 8.2e-52 209.5 141 70.2
Solyc03g053000.4 Solanum lycopersicum HOM05D004031 ORTHO05D006678 4.1e-51 207.2 167 61.1
Nitab4.5_0000009g0260 Nicotiana tabacum HOM05D004031 ORTHO05D011186 3.6e-47 194.1 134 69.4
CSS0049250 Camellia sinensis var. sinensis HOM05D004031 ORTHO05D006678 6.3e-44 183.3 118 72.0
SHI31745 Sapria himalayana HOM05D004031 ORTHO05D006678 1.7e-41 175.3 138 60.1
Psat4g142720 Pisum sativum HOM05D003784 ORTHO05D004345 2.8e-36 157.9 130 61.5
CSS0030002 Camellia sinensis var. sinensis HOM05D004031 ORTHO05D006678 1.0e-33 149.4 114 64.0
PRCOL_00003629 Prasinoderma coloniale HOM05D004031 ORTHO05D006678 1.2e-31 142.5 733 23.5
CBR_g44463 Chara braunii HOM05D000019 ORTHO05D000002 4.7e-31 140.6 157 43.9
Psat4g142800 Pisum sativum HOM05D003784 ORTHO05D004345 3.4e-29 134.4 86 70.9
Cre08.g370250 Chlamydomonas reinhardtii HOM05D004031 ORTHO05D006678 3.9e-25 120.9 544 24.3
BcaB06g25555 Brassica carinata HOM05D004031 ORTHO05D006678 5.0e-25 120.6 97 58.8
Nn3g18463 Nelumbo nucifera HOM05D004031 ORTHO05D006678 6.6e-25 120.2 74 74.3
CBR_g32657 Chara braunii HOM05D004031 ORTHO05D006678 3.3e-24 117.9 207 32.4
Aa31LG3G5510 Aethionema arabicum HOM05D004031 ORTHO05D006678 9.5e-24 116.3 83 65.1
C05p55850 Brassica napus HOM05D004031 ORTHO05D006678 8.0e-23 113.2 90 56.7
BolC5t34254H Brassica oleracea HOM05D004031 ORTHO05D006678 8.0e-23 113.2 90 56.7
CBR_g32659 Chara braunii HOM05D001409 ORTHO05D001511 5.4e-19 100.5 149 36.2
MCO13G277 Micromonas commoda HOM05D004031 ORTHO05D006678 1.3e-17 95.9 410 27.1
Nn2g13219 Nelumbo nucifera HOM05D004031 ORTHO05D006678 2.1e-10 72.0 47 70.2
SHI31750 Sapria himalayana HOM05D003430 ORTHO05D014065 7.8e-10 70.1 71 53.5
SHI31749 Sapria himalayana HOM05D003430 ORTHO05D004809 5.1e-09 67.4 58 53.4


User provided reference genes

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