Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold105G30499 Striga asiatica HOM05D003641 ORTHO05D004915 9.4e-206 719.9 356 100.0
SGA_v2.0_scaffold69G23056 Striga asiatica HOM05D003641 ORTHO05D004915 2.1e-173 612.5 356 85.1
MSTRG.19915 Avicennia marina HOM05D003641 ORTHO05D004915 2.9e-170 602.1 356 81.7
Oeu063867.1 Olea europaea HOM05D003641 ORTHO05D004915 1.3e-167 593.2 356 81.7
SalBow6G5303 Salvia bowleyana HOM05D003641 ORTHO05D004915 2.3e-167 592.4 356 81.7
Migut.J01850 Erythranthe guttata HOM05D003641 ORTHO05D004915 4.4e-163 578.2 358 79.1
Oeu006209.1 Olea europaea HOM05D003641 ORTHO05D004915 9.9e-163 577.0 365 74.8
unitig_899.g15167 Utricularia gibba HOM05D003641 ORTHO05D004915 3.6e-157 558.5 356 75.0
Nitab4.5_0007274g0010 Nicotiana tabacum HOM05D003641 ORTHO05D004915 1.1e-156 557.0 357 76.2
PGSC0003DMG400011447 Solanum tuberosum HOM05D003641 ORTHO05D004915 1.4e-156 556.6 356 75.8
CAN.G960.10 Capsicum annuum HOM05D003641 ORTHO05D004915 3.1e-156 555.4 358 74.6
Sopen10g029550 Solanum pennellii HOM05D003641 ORTHO05D004915 6.8e-156 554.3 356 75.3
Solyc10g078930.2 Solanum lycopersicum HOM05D003641 ORTHO05D004915 2.2e-154 549.3 356 74.4
Manes.09G037400 Manihot esculenta HOM05D003641 ORTHO05D004915 2.4e-153 545.8 356 73.9
Peaxi162Scf00258g00921 Petunia axillaris HOM05D003641 ORTHO05D004915 2.4e-153 545.8 360 73.3
TWI53G2154 Tripterygium wilfordii HOM05D003641 ORTHO05D004915 7.1e-153 544.3 357 75.1
TWI74G1529 Tripterygium wilfordii HOM05D003641 ORTHO05D004915 3.5e-152 542.0 356 74.4
unitig_746.g26803 Utricularia gibba HOM05D003641 ORTHO05D004915 4.6e-152 541.6 341 76.5
Sabra06G0149100 Salix brachista HOM05D003641 ORTHO05D004915 5.1e-151 538.1 356 74.2
Lj2A365T90 Lonicera japonica HOM05D003641 ORTHO05D004915 7.3e-150 534.3 358 73.7
Sabra16G0062900 Salix brachista HOM05D003641 ORTHO05D004915 3.6e-149 531.9 356 73.0
Haze_20012 Corylus avellana HOM05D003641 ORTHO05D004915 1.4e-148 530.0 356 71.9
vmacro07894 Vaccinium macrocarpon HOM05D003641 ORTHO05D004915 1.4e-148 530.0 356 72.8
Cc06_g15710 Coffea canephora HOM05D003641 ORTHO05D004915 4.0e-148 528.5 356 72.8
Manes.08G042800 Manihot esculenta HOM05D003641 ORTHO05D004915 4.0e-148 528.5 356 71.9
Ciclev10012043m.g Citrus clementina HOM05D003641 ORTHO05D004915 6.9e-148 527.7 363 71.9
Duzib093G1627 Durio zibethinus HOM05D003641 ORTHO05D004915 1.2e-147 526.9 363 70.0
Potri.006G194400 Populus trichocarpa HOM05D003641 ORTHO05D004915 1.2e-147 526.9 356 72.2
CsaV3_3G038670 Cucumis sativus L. HOM05D003641 ORTHO05D004915 1.5e-147 526.6 357 71.7
Potri.016G060100 Populus trichocarpa HOM05D003641 ORTHO05D004915 1.5e-147 526.6 358 71.5
Aa31sc80G90 Aethionema arabicum HOM05D003641 ORTHO05D004915 5.8e-147 524.6 361 70.9
ClCG10G017650 Citrullus lanatus HOM05D003641 ORTHO05D004915 5.8e-147 524.6 357 71.7
Cfa020150 Carpinus fangiana HOM05D003641 ORTHO05D004915 7.6e-147 524.2 356 70.8
Atru.chr8.1148 Acer truncatum HOM05D003641 ORTHO05D004915 1.3e-146 523.5 356 71.3
Rhsim03G0004900 Rhododendron simsii HOM05D003641 ORTHO05D004915 1.7e-146 523.1 356 72.2
Hund24813 Selenicereus undatus HOM05D003641 ORTHO05D004915 4.9e-146 521.5 356 70.2
CiPaw.09G029000 Carya illinoinensis HOM05D003641 ORTHO05D004915 6.4e-146 521.2 356 70.2
Sc13g0002360 Simmondsia chinensis HOM05D003641 ORTHO05D004915 6.4e-146 521.2 357 71.1
Sed0007356 Sechium edule HOM05D003641 ORTHO05D004915 8.4e-146 520.8 357 70.6
MELO3C009611.2 Cucumis melo HOM05D003641 ORTHO05D004915 1.9e-145 519.6 357 71.1
CSS0018208 Camellia sinensis var. sinensis HOM05D003641 ORTHO05D004915 3.2e-145 518.8 356 71.9
Thecc.05G174300 Theobroma cacao HOM05D003641 ORTHO05D004915 5.4e-145 518.1 364 69.0
AT3G12050 Arabidopsis thaliana HOM05D003641 ORTHO05D004915 7.1e-145 517.7 363 71.1
ECA248G0025 Erigeron canadensis HOM05D003641 ORTHO05D004915 7.1e-145 517.7 356 70.2
Hma1.2p1_0676F.1_g201930 Hydrangea macrophylla HOM05D003641 ORTHO05D004915 7.1e-145 517.7 356 70.5
CANSAT64G0207 Cannabis sativa HOM05D003641 ORTHO05D004915 9.3e-145 517.3 361 68.7
MBI19_g17419_MAGBIO Magnolia biondii HOM05D003641 ORTHO05D004915 9.3e-145 517.3 356 71.1
Gorai.012G099600 Gossypium raimondii HOM05D003641 ORTHO05D004915 1.2e-144 516.9 356 68.5
DCAR_017036 Daucus carota HOM05D003641 ORTHO05D004915 2.1e-144 516.2 356 71.3
Gohir.D04G089500 Gossypium hirsutum HOM05D003641 ORTHO05D004915 2.1e-144 516.2 356 68.3
MD14G1054700 Malus domestica HOM05D003641 ORTHO05D004915 2.1e-144 516.2 360 69.4
C05p55760 Brassica napus HOM05D003641 ORTHO05D004915 2.7e-144 515.8 356 70.2
Duzib128G0491 Durio zibethinus HOM05D003641 ORTHO05D004915 3.5e-144 515.4 360 68.9
Eucgr.A02465 Eucalyptus grandis HOM05D003641 ORTHO05D004915 7.9e-144 514.2 359 68.5
Lju124A24T32 Lonicera japonica HOM05D003641 ORTHO05D004915 7.9e-144 514.2 356 70.5
AL3G23660 Arabidopsis lyrata HOM05D003641 ORTHO05D004915 1.0e-143 513.8 363 70.2
Cpa.g.sc85.60 Carica papaya HOM05D003641 ORTHO05D004915 1.7e-143 513.1 356 68.0
COL.COLO4_29349 Corchorus olitorius HOM05D003641 ORTHO05D004915 3.0e-143 512.3 356 68.8
Nitab4.5_0001137g0010 Nicotiana tabacum HOM05D003641 ORTHO05D004915 3.0e-143 512.3 357 71.1
BcaB06g25550 Brassica carinata HOM05D003641 ORTHO05D004915 3.9e-143 511.9 357 70.9
Thhalv10021006m.g Eutrema salsugineum HOM05D003641 ORTHO05D004915 5.1e-143 511.5 365 69.9
TAR633G0428 Trochodendron aralioides HOM05D003641 ORTHO05D004915 8.7e-143 510.8 357 69.5
FvH4_6g21990 Fragaria vesca HOM05D003641 ORTHO05D004915 1.1e-142 510.4 356 68.3
FAN14G0097 Fragaria x ananassa HOM05D003641 ORTHO05D004915 1.1e-142 510.4 356 68.3
Gohir.A04G051900 Gossypium hirsutum HOM05D003641 ORTHO05D004915 1.1e-142 510.4 356 67.7
AUR62011998 Chenopodium quinoa HOM05D003641 ORTHO05D004915 1.5e-142 510.0 357 68.9
EL10Ac3g06892 Beta vulgaris HOM05D003641 ORTHO05D004915 2.5e-142 509.2 356 69.1
HanXRQChr01g0010591 Helianthus annuus HOM05D003641 ORTHO05D004915 4.3e-142 508.4 356 69.7
TAR636G0728 Trochodendron aralioides HOM05D003641 ORTHO05D004915 4.3e-142 508.4 357 68.6
CARHR086620 Cardamine hirsuta HOM05D003641 ORTHO05D004915 7.3e-142 507.7 362 69.3
QL07p024293 Quercus lobata HOM05D003641 ORTHO05D004915 7.3e-142 507.7 368 68.2
Sp3g10280 Schrenkiella parvula HOM05D003641 ORTHO05D004915 9.6e-142 507.3 362 69.1
BraA05t22525Z Brassica rapa HOM05D003641 ORTHO05D004915 1.6e-141 506.5 356 68.8
PGR004G2452 Punica granatum HOM05D003641 ORTHO05D004915 1.6e-141 506.5 356 68.3
MD12G1055300 Malus domestica HOM05D003641 ORTHO05D004915 2.8e-141 505.8 356 68.0
Dinv24057 Davidia involucrata HOM05D003641 ORTHO05D004915 3.6e-141 505.4 356 68.8
FAN05G2657 Fragaria x ananassa HOM05D003641 ORTHO05D004915 6.2e-141 504.6 356 67.1
A05p37290 Brassica napus HOM05D003641 ORTHO05D004915 1.4e-140 503.4 356 68.8
FAN09G3507 Fragaria x ananassa HOM05D003641 ORTHO05D004915 1.4e-140 503.4 356 66.9
CiPaw.10G025600 Carya illinoinensis HOM05D003641 ORTHO05D004915 2.4e-140 502.7 356 66.9
RcHm_v2.0_Chr3g0479291 Rosa chinensis HOM05D003641 ORTHO05D004915 2.4e-140 502.7 356 67.7
Lj5g0013930 Lotus japonicus HOM05D003641 ORTHO05D004915 4.0e-140 501.9 359 67.7
Aqoxy1G00140 Aquilegia oxysepala HOM05D003641 ORTHO05D004915 6.9e-140 501.1 357 68.9
FAN02G1826 Fragaria x ananassa HOM05D003641 ORTHO05D004915 6.9e-140 501.1 356 66.9
Prupe.7G080100 Prunus persica HOM05D003641 ORTHO05D004915 6.9e-140 501.1 356 67.1
Nitab4.5_0000105g0210 Nicotiana tabacum HOM05D003641 ORTHO05D004915 1.2e-139 500.4 352 70.5
THA.LOC104826776 Tarenaya hassleriana HOM05D003641 ORTHO05D004915 1.2e-139 500.4 356 66.9
Lsat_1_v5_gn_5_164500 Lactuca sativa HOM05D003641 ORTHO05D004915 2.0e-139 499.6 350 68.9
Glyma.03G146100 Glycine max HOM05D003641 ORTHO05D004915 5.8e-139 498.0 358 66.5
AUR62015343 Chenopodium quinoa HOM05D003641 ORTHO05D004915 7.6e-139 497.7 356 67.7
Lj1g0002782 Lotus japonicus HOM05D003641 ORTHO05D004915 1.3e-138 496.9 356 66.6
BolC5t34243H Brassica oleracea HOM05D003641 ORTHO05D004915 4.9e-138 495.0 399 62.7
CDE05G2508 Ceratophyllum demersum HOM05D003641 ORTHO05D004915 6.4e-138 494.6 356 67.4
Nitab4.5_0002343g0010 Nicotiana tabacum HOM05D003641 ORTHO05D004915 1.1e-137 493.8 358 69.3
Carub.0003s1139 Capsella rubella HOM05D003641 ORTHO05D004915 1.4e-137 493.4 365 67.7
Ca_08533_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 1.4e-137 493.4 361 66.5
Ca_12045_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 1.4e-137 493.4 357 65.8
Psat3g067000 Pisum sativum HOM05D003641 ORTHO05D004915 1.4e-137 493.4 358 66.5
ATR0598G178 Amborella trichopoda HOM05D003641 ORTHO05D004915 7.1e-137 491.1 356 66.9
CDE11G0833 Ceratophyllum demersum HOM05D003641 ORTHO05D004915 9.3e-137 490.7 356 66.6
Medtr7g093500 Medicago truncatula HOM05D003641 ORTHO05D004915 9.3e-137 490.7 356 66.9
Glyma.19G149300 Glycine max HOM05D003641 ORTHO05D004915 1.6e-136 490.0 356 65.2
arahy.Tifrunner.gnm1.ann1.G8NWJQ Arachis hypogaea HOM05D003641 ORTHO05D004915 2.1e-136 489.6 367 64.0
arahy.Tifrunner.gnm1.ann1.86C462 Arachis hypogaea HOM05D003641 ORTHO05D004915 4.6e-136 488.4 367 64.0
TPR.G30301 Trifolium pratense HOM05D003641 ORTHO05D004915 6.0e-136 488.0 356 66.0
THA.LOC104809934 Tarenaya hassleriana HOM05D003641 ORTHO05D004915 1.8e-135 486.5 356 66.3
Phvul.001G143800 Phaseolus vulgaris HOM05D003641 ORTHO05D004915 3.0e-135 485.7 362 64.6
VMungo1383G0826 Vigna mungo HOM05D003641 ORTHO05D004915 8.7e-135 484.2 364 64.8
Glyma.09G109200 Glycine max HOM05D003641 ORTHO05D004915 1.5e-134 483.4 361 65.4
PSO135G0566 Papaver somniferum HOM05D003641 ORTHO05D004915 1.9e-134 483.0 357 65.5
PSO724G0609 Papaver somniferum HOM05D003641 ORTHO05D004915 2.8e-133 479.2 359 64.9
Hund19209 Selenicereus undatus HOM05D003641 ORTHO05D004915 4.8e-133 478.4 357 65.3
Medtr0136s0060 Medicago truncatula HOM05D003641 ORTHO05D004915 8.1e-133 477.6 358 64.8
HPP92_005766 Vanilla planifolia HOM05D003641 ORTHO05D004915 8.1e-133 477.6 367 63.5
Ah.04g152830 Amaranthus hybridus HOM05D003641 ORTHO05D004915 4.0e-132 475.3 338 67.2
Os08g0464000 Oryza sativa ssp. japonica HOM05D003641 ORTHO05D004915 6.9e-132 474.6 361 64.5
Glyma.02G171100 Glycine max HOM05D003641 ORTHO05D004915 2.6e-131 472.6 356 65.4
Zm00001eb037640 Zea mays HOM05D003641 ORTHO05D004915 2.6e-131 472.6 357 63.9
Phvul.007G261100 Phaseolus vulgaris HOM05D003641 ORTHO05D004915 4.5e-131 471.9 356 63.2
VMungo0720G0815 Vigna mungo HOM05D003641 ORTHO05D004915 7.6e-131 471.1 358 62.8
Lalb_Chr18g0047991 Lupinus albus HOM05D003641 ORTHO05D004915 8.4e-130 467.6 359 63.8
BcaC05g29294 Brassica carinata HOM05D003641 ORTHO05D004915 3.2e-129 465.7 356 65.7
HPP92_009321 Vanilla planifolia HOM05D003641 ORTHO05D004915 6.0e-128 461.5 361 62.3
Zm00001eb177410 Zea mays HOM05D003641 ORTHO05D004915 9.6e-126 454.1 358 61.7
Pp3c15_21400 Physcomitrium patens HOM05D003641 ORTHO05D004915 3.2e-121 439.1 360 58.3
Mapoly0109s0023 Marchantia polymorpha HOM05D003641 ORTHO05D004915 2.1e-120 436.4 359 60.7
SMO203G0054 Selaginella moellendorffii HOM05D003641 ORTHO05D004915 2.1e-120 436.4 356 58.7
Pp3c9_15400 Physcomitrium patens HOM05D003641 ORTHO05D004915 5.7e-118 428.3 358 58.7
AagrBONN_evm.TU.Sc2ySwM_344.3694 Anthoceros agrestis HOM05D003641 ORTHO05D004915 1.8e-116 423.3 356 57.6
Nn7g35972 Nelumbo nucifera HOM05D003641 ORTHO05D004915 1.3e-114 417.2 308 65.9
Nn7g35971 Nelumbo nucifera HOM05D003641 ORTHO05D004915 5.5e-113 411.8 294 68.0
Psat6g123080 Pisum sativum HOM05D003641 ORTHO05D004915 8.2e-109 397.9 299 65.2
Actinidia22049 Actinidia chinensis HOM05D003641 ORTHO05D004915 6.5e-106 388.3 358 58.7
GSVIVG01033476001 Vitis vinifera HOM05D003641 ORTHO05D004915 1.4e-100 370.5 356 55.3
Actinidia14376 Actinidia chinensis HOM05D003641 ORTHO05D004915 4.1e-100 369.0 330 61.5
Gorai.012G099500 Gossypium raimondii HOM05D003641 ORTHO05D004915 1.1e-97 360.9 328 56.4
TPR.G35793 Trifolium pratense HOM05D003641 ORTHO05D004915 8.0e-96 354.8 299 59.5
Gohir.D04G089400 Gossypium hirsutum HOM05D003641 ORTHO05D004915 5.4e-76 288.9 213 68.1
PRCOL_00005901 Prasinoderma coloniale HOM05D003641 ORTHO05D004915 3.3e-73 279.6 356 40.4
BcaC09g48210 Brassica carinata HOM05D003641 ORTHO05D004915 1.5e-70 270.8 249 59.0
SEGI_39925 Sequoiadendron giganteum HOM05D003641 ORTHO05D004915 4.1e-68 262.7 274 48.5
MCO07G236 Micromonas commoda HOM05D003641 ORTHO05D004915 1.6e-67 260.8 357 41.2
Gohir.A04G052000 Gossypium hirsutum HOM05D003641 ORTHO05D004915 2.3e-58 230.3 175 67.4
Gohir.A04G052026 Gossypium hirsutum HOM05D003641 ORTHO05D004915 2.3e-58 230.3 157 66.9
Actinidia32404 Actinidia chinensis HOM05D003641 ORTHO05D004915 6.8e-55 218.8 115 88.7
Cre03.g199300 Chlamydomonas reinhardtii HOM05D003641 ORTHO05D004915 6.8e-55 218.8 357 35.0
arahy.Tifrunner.gnm1.ann1.EPN7T6 Arachis hypogaea HOM05D003641 ORTHO05D004915 9.2e-52 208.4 150 68.0
arahy.Tifrunner.gnm1.ann1.VQQW03 Arachis hypogaea HOM05D003641 ORTHO05D004915 1.2e-51 208.0 126 77.0
SEGI_05882 Sequoiadendron giganteum HOM05D003641 ORTHO05D004915 4.2e-36 156.4 161 50.3
Ca_31327_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 2.4e-31 140.6 85 69.4
Glyma.09G095600 Glycine max HOM05D003641 ORTHO05D004915 4.0e-31 139.8 135 54.1
Ca_14569_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 5.3e-31 139.4 85 69.4
Ca_20435_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 1.2e-30 138.3 85 68.2
Ca_09720_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 6.4e-29 132.5 85 65.9
HanXRQChr03g0083061 Helianthus annuus HOM05D003641 ORTHO05D004915 2.4e-28 130.6 139 47.5
Hund07686 Selenicereus undatus HOM05D003641 ORTHO05D011049 9.3e-28 128.6 192 39.6
arahy.Tifrunner.gnm1.ann1.20Y790 Arachis hypogaea HOM05D003641 ORTHO05D004915 2.3e-26 124.0 106 59.4
Hund07687 Selenicereus undatus HOM05D003641 ORTHO05D021213 9.6e-25 118.6 194 40.7
SGA_v2.0_scaffold200G41266 Striga asiatica HOM05D037212 ORTHO05D027013 4.8e-24 116.3 75 76.0
Dinv18648 Davidia involucrata HOM05D003641 ORTHO05D004915 9.0e-23 112.1 59 88.1
Dinv26263 Davidia involucrata HOM05D003641 ORTHO05D004915 9.0e-23 112.1 59 88.1
Dinv18651 Davidia involucrata HOM05D003641 ORTHO05D004915 1.5e-22 111.3 63 84.1
Ca_12039_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 4.5e-22 109.8 58 86.2
Nn8g39306 Nelumbo nucifera HOM05D003641 ORTHO05D004915 7.1e-20 102.4 61 77.0
CBR_g18730 Chara braunii HOM05D003641 ORTHO05D004915 3.3e-17 93.6 55 76.4
arahy.Tifrunner.gnm1.ann1.XYD4PT Arachis hypogaea HOM05D003641 ORTHO05D038899 1.3e-16 91.7 76 60.5
MCO11G399 Micromonas commoda HOM05D003641 ORTHO05D044219 4.8e-16 89.7 149 35.6
Ca_03268_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 3.1e-15 87.0 58 67.2
EL10Ac8g19334 Beta vulgaris HOM05D003641 ORTHO05D027013 9.0e-15 85.5 76 56.6
SGA_v2.0_scaffold196G40950 Striga asiatica HOM05D003641 ORTHO05D403144 1.5e-14 84.7 124 47.6
Ca_20824_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 3.8e-13 80.1 39 79.5
BolC1t05367H Brassica oleracea HOM05D003641 ORTHO05D038899 8.4e-13 79.0 49 71.4
Cre08.g358539 Chlamydomonas reinhardtii HOM05D003641 ORTHO05D044219 2.1e-11 74.3 150 29.3
TWI14G1341 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 2.7e-11 73.9 81 49.4
CsaV3_5G015400 Cucumis sativus L. HOM05D003641 ORTHO05D004915 4.6e-11 73.2 50 66.0
SGA_v2.0_scaffold373G50208 Striga asiatica HOM05D003641 ORTHO05D404367 3.3e-09 67.0 46 76.1
VMungo0464G0530 Vigna mungo HOM05D003641 ORTHO05D004915 2.1e-08 64.3 65 46.2
Sopen02g001110 Solanum pennellii HOM05D003641 ORTHO05D004915 1.1e-07 62.0 100 45.0
Peaxi162Scf00003g04539 Petunia axillaris HOM05D000312 ORTHO05D000221 1.4e-07 61.6 87 41.4
PGSC0003DMG400035352 Solanum tuberosum HOM05D003641 ORTHO05D004915 2.4e-07 60.8 84 42.9
arahy.Tifrunner.gnm1.ann1.5I9U23 Arachis hypogaea HOM05D003641 ORTHO05D085625 2.0e-06 57.8 122 34.4


User provided reference genes

Program Settings