Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold105G30410 Striga asiatica HOM05D007137 ORTHO05D008982 2.7e-205 718.4 352 100.0
MSTRG.6429 Avicennia marina HOM05D007137 ORTHO05D008982 1.6e-72 277.3 179 75.4
Migut.J01757 Erythranthe guttata HOM05D007137 ORTHO05D008982 2.1e-72 276.9 169 76.3
Oeu008913.1 Olea europaea HOM05D007137 ORTHO05D008982 6.7e-71 271.9 168 74.4
Oeu008915.1 Olea europaea HOM05D007137 ORTHO05D008982 6.7e-71 271.9 168 74.4
Cc06_g17570 Coffea canephora HOM05D007137 ORTHO05D008982 2.2e-66 256.9 197 62.4
Dinv39605 Davidia involucrata HOM05D007137 ORTHO05D008982 2.2e-66 256.9 195 63.6
ECA247G4023 Erigeron canadensis HOM05D007137 ORTHO05D008982 6.5e-66 255.4 175 66.9
Cfa016812 Carpinus fangiana HOM05D007137 ORTHO05D008982 1.4e-65 254.2 180 65.6
Actinidia09328 Actinidia chinensis HOM05D007137 ORTHO05D008982 1.9e-65 253.8 195 62.6
Lju124C41G12 Lonicera japonica HOM05D007137 ORTHO05D008982 9.4e-65 251.5 163 71.8
CSS0026997 Camellia sinensis var. sinensis HOM05D007137 ORTHO05D008982 1.6e-64 250.8 195 62.6
TWI74G1615 Tripterygium wilfordii HOM05D007137 ORTHO05D008982 2.1e-64 250.4 196 60.2
Lsat_1_v5_gn_9_29000 Lactuca sativa HOM05D007137 ORTHO05D008982 3.6e-64 249.6 224 57.1
Rhsim03G0024800 Rhododendron simsii HOM05D007137 ORTHO05D008982 4.7e-64 249.2 195 61.5
CiPaw.09G038400 Carya illinoinensis HOM05D007137 ORTHO05D008982 1.4e-63 247.7 180 64.4
Ciclev10005859m.g Citrus clementina HOM05D007137 ORTHO05D008982 1.4e-63 247.7 196 61.7
AUR62026042 Chenopodium quinoa HOM05D007137 ORTHO05D008982 3.0e-63 246.5 194 62.4
Rhsim03G0024600 Rhododendron simsii HOM05D007137 ORTHO05D008982 3.0e-63 246.5 195 61.0
Potri.006G051500 Populus trichocarpa HOM05D007137 ORTHO05D008982 1.5e-62 244.2 179 65.4
AUR62024453 Chenopodium quinoa HOM05D007137 ORTHO05D008982 2.0e-62 243.8 196 60.7
Haze_19852 Corylus avellana HOM05D007137 ORTHO05D008982 2.6e-62 243.4 211 56.4
Sabra06G0036100 Salix brachista HOM05D007137 ORTHO05D008982 2.6e-62 243.4 163 68.1
TAR369G0818 Trochodendron aralioides HOM05D007137 ORTHO05D008982 2.6e-62 243.4 183 61.2
Sc13g0001720 Simmondsia chinensis HOM05D007137 ORTHO05D008982 3.3e-62 243.0 195 59.0
Thecc.05G153200 Theobroma cacao HOM05D007137 ORTHO05D008982 4.4e-62 242.7 180 65.0
Prupe.7G059700 Prunus persica HOM05D007137 ORTHO05D008982 1.7e-61 240.7 198 58.1
PGSC0003DMG400027277 Solanum tuberosum HOM05D007137 ORTHO05D008982 1.7e-61 240.7 178 65.2
Sopen04g007840 Solanum pennellii HOM05D007137 ORTHO05D008982 2.2e-61 240.4 178 65.2
Cpa.g.sc92.53 Carica papaya HOM05D007137 ORTHO05D008982 2.8e-61 240.0 164 67.7
HanXRQChr15g0491151 Helianthus annuus HOM05D007137 ORTHO05D008982 2.8e-61 240.0 176 64.2
EL10Ac3g07093 Beta vulgaris HOM05D007137 ORTHO05D008982 4.8e-61 239.2 247 53.8
Duzib093G1775 Durio zibethinus HOM05D007137 ORTHO05D008982 4.8e-61 239.2 180 63.3
Gohir.D09G118100 Gossypium hirsutum HOM05D007137 ORTHO05D008982 6.3e-61 238.8 193 61.1
Gorai.006G136400 Gossypium raimondii HOM05D007137 ORTHO05D008982 6.3e-61 238.8 193 61.1
Solyc04g015760.4 Solanum lycopersicum HOM05D007137 ORTHO05D008982 6.3e-61 238.8 179 63.7
THA.LOC104818226 Tarenaya hassleriana HOM05D007137 ORTHO05D008982 6.3e-61 238.8 195 59.5
Gohir.A09G122000 Gossypium hirsutum HOM05D007137 ORTHO05D008982 8.2e-61 238.4 193 60.6
Hma1.2p1_2002F.1_g310780 Hydrangea macrophylla HOM05D007137 ORTHO05D008982 8.2e-61 238.4 169 63.9
CANSAT80G1960 Cannabis sativa HOM05D007137 ORTHO05D008982 2.4e-60 236.9 178 64.6
CANSAT80G0539 Cannabis sativa HOM05D007137 ORTHO05D008982 4.1e-60 236.1 178 64.6
Nitab4.5_0010636g0030 Nicotiana tabacum HOM05D007137 ORTHO05D008982 5.3e-60 235.7 178 63.5
Nn2g15218 Nelumbo nucifera HOM05D007137 ORTHO05D008982 2.0e-59 233.8 179 59.2
Peaxi162Scf00130g00019 Petunia axillaris HOM05D007137 ORTHO05D008982 2.0e-59 233.8 178 64.6
RcHm_v2.0_Chr3g0482531 Rosa chinensis HOM05D007137 ORTHO05D008982 2.0e-59 233.8 200 58.0
vmacro07849 Vaccinium macrocarpon HOM05D007137 ORTHO05D008982 2.6e-59 233.4 204 55.4
GSVIVG01033260001 Vitis vinifera HOM05D007137 ORTHO05D008982 3.5e-59 233.0 195 57.4
FAN05G2215 Fragaria x ananassa HOM05D007137 ORTHO05D008982 5.9e-59 232.3 199 56.3
PGR004G0226 Punica granatum HOM05D007137 ORTHO05D008982 7.7e-59 231.9 179 60.3
Nitab4.5_0005195g0030 Nicotiana tabacum HOM05D007137 ORTHO05D008982 1.0e-58 231.5 179 62.6
BolC3t15165H Brassica oleracea HOM05D007137 ORTHO05D008982 1.3e-58 231.1 203 54.7
Hund24707 Selenicereus undatus HOM05D007137 ORTHO05D008982 1.3e-58 231.1 192 60.4
Ah.04g151610 Amaranthus hybridus HOM05D000942 ORTHO05D000918 1.7e-58 230.7 162 66.0
C03p27930 Brassica napus HOM05D007137 ORTHO05D008982 2.9e-58 229.9 201 54.7
Carub.0004s2404 Capsella rubella HOM05D007137 ORTHO05D008982 2.9e-58 229.9 180 57.8
FAN09G1348 Fragaria x ananassa HOM05D007137 ORTHO05D008982 2.9e-58 229.9 199 55.8
CAN.G1456.1 Capsicum annuum HOM05D007137 ORTHO05D008982 3.8e-58 229.6 162 66.0
FvH4_6g23850 Fragaria vesca HOM05D007137 ORTHO05D008982 3.8e-58 229.6 199 55.8
AT2G41760 Arabidopsis thaliana HOM05D007137 ORTHO05D008982 5.0e-58 229.2 175 60.6
QL07p000577 Quercus lobata HOM05D007137 ORTHO05D008982 6.5e-58 228.8 177 61.6
CARHR136840 Cardamine hirsuta HOM05D007137 ORTHO05D008982 8.5e-58 228.4 197 54.8
AL4G40070 Arabidopsis lyrata HOM05D007137 ORTHO05D008982 1.1e-57 228.0 175 60.0
Atru.BG.154.p Acer truncatum HOM05D007137 ORTHO05D008982 1.5e-57 227.6 200 57.5
CAN.G676.70 Capsicum annuum HOM05D007137 ORTHO05D008982 1.9e-57 227.3 174 63.2
DCAR_020492 Daucus carota HOM05D007137 ORTHO05D008982 1.9e-57 227.3 160 66.9
Aa31LG1G23770 Aethionema arabicum HOM05D007137 ORTHO05D008982 3.2e-57 226.5 161 62.7
Thhalv10017217m.g Eutrema salsugineum HOM05D007137 ORTHO05D008982 3.2e-57 226.5 178 59.0
A03p23410 Brassica napus HOM05D007137 ORTHO05D008982 5.5e-57 225.7 207 52.7
BraA03t11558Z Brassica rapa HOM05D007137 ORTHO05D008982 7.2e-57 225.3 207 52.7
Sp4g24030 Schrenkiella parvula HOM05D007137 ORTHO05D008982 9.4e-57 224.9 178 60.1
Lalb_Chr21g0316491 Lupinus albus HOM05D007137 ORTHO05D008982 2.1e-56 223.8 185 58.9
Medtr7g034355 Medicago truncatula HOM05D007137 ORTHO05D008982 2.1e-56 223.8 181 60.8
MD12G1074200 Malus domestica HOM05D007137 ORTHO05D008982 6.1e-56 222.2 182 61.0
Phvul.007G252600 Phaseolus vulgaris HOM05D007137 ORTHO05D008982 6.1e-56 222.2 184 59.8
SalBow6G6768 Salvia bowleyana HOM05D007137 ORTHO05D008982 8.0e-56 221.9 195 60.5
TPR.G10636 Trifolium pratense HOM05D007137 ORTHO05D008982 1.8e-55 220.7 170 62.9
arahy.Tifrunner.gnm1.ann1.F03MXT Arachis hypogaea HOM05D007137 ORTHO05D008982 4.0e-55 219.5 177 58.8
Ca_26019_v3 Cicer arietinum L. HOM05D007137 ORTHO05D008982 4.0e-55 219.5 171 61.4
arahy.Tifrunner.gnm1.ann1.QC7DP1 Arachis hypogaea HOM05D007137 ORTHO05D008982 8.8e-55 218.4 168 61.9
Glyma.10G097900 Glycine max HOM05D007137 ORTHO05D008982 8.8e-55 218.4 171 59.6
Lj5g0009390 Lotus japonicus HOM05D007137 ORTHO05D008982 2.6e-54 216.9 174 61.5
Sed0021909 Sechium edule HOM05D007137 ORTHO05D008982 2.2e-53 213.8 179 56.4
Eucgr.A02346 Eucalyptus grandis HOM05D007137 ORTHO05D008982 2.8e-53 213.4 168 60.1
CsaV3_3G039290 Cucumis sativus L. HOM05D007137 ORTHO05D008982 3.1e-52 209.9 193 53.9
PSO384G0937 Papaver somniferum HOM05D007137 ORTHO05D008982 7.0e-52 208.8 181 58.0
MELO3C009672.2 Cucumis melo HOM05D007137 ORTHO05D008982 2.0e-51 207.2 175 56.6
Aqoxy1G00329 Aquilegia oxysepala HOM05D007137 ORTHO05D008982 4.5e-51 206.1 177 54.2
MBI17_g01631_MAGBIO Magnolia biondii HOM05D007137 ORTHO05D008982 8.5e-50 201.8 164 57.9
HPP92_001018 Vanilla planifolia HOM05D007137 ORTHO05D008982 4.7e-48 196.1 175 53.7
Os05g0387900 Oryza sativa ssp. japonica HOM05D007137 ORTHO05D008982 8.8e-47 191.8 162 58.0
Manes.09G022100 Manihot esculenta HOM05D007137 ORTHO05D008982 3.1e-44 183.3 135 62.2
CSS0041211 Camellia sinensis var. sinensis HOM05D007137 ORTHO05D008982 3.8e-42 176.4 147 58.5
Psat6g120120 Pisum sativum HOM05D007137 ORTHO05D008982 2.5e-41 173.7 130 63.1
Pp3c8_16370 Physcomitrium patens HOM05D007137 ORTHO05D008982 6.1e-40 169.1 179 47.5
ATR0320G015 Amborella trichopoda HOM05D007137 ORTHO05D008982 1.8e-39 167.5 187 44.9
CDE02G1742 Ceratophyllum demersum HOM05D007137 ORTHO05D008982 1.0e-34 151.8 137 49.6
ClCG10G017100 Citrullus lanatus HOM05D007137 ORTHO05D008982 3.8e-34 149.8 165 50.3
FAN02G0118 Fragaria x ananassa HOM05D007137 ORTHO05D008982 3.8e-34 149.8 130 56.9
Mapoly0062s0037 Marchantia polymorpha HOM05D007137 ORTHO05D008982 5.0e-34 149.4 179 43.6
SMO353G0157 Selaginella moellendorffii HOM05D007137 ORTHO05D008982 4.7e-32 142.9 178 39.9
SMO302G0006 Selaginella moellendorffii HOM05D007137 ORTHO05D008982 3.0e-31 140.2 173 41.6
Rhsim03G0024200 Rhododendron simsii HOM05D007137 ORTHO05D008982 2.6e-30 137.1 163 44.8
Hma1.2p1_2520F.1_g323835 Hydrangea macrophylla HOM05D007137 ORTHO05D008982 2.7e-27 127.1 79 69.6
CSS0024811 Camellia sinensis var. sinensis HOM05D007137 ORTHO05D008982 6.8e-23 112.5 81 63.0
VMungo0720G0821 Vigna mungo HOM05D007137 ORTHO05D008982 1.2e-22 111.7 99 54.5
CBR_g39180 Chara braunii HOM05D007137 ORTHO05D008982 3.5e-19 100.1 88 47.7
SEGI_00420 Sequoiadendron giganteum HOM05D007137 ORTHO05D008982 1.5e-17 94.7 88 50.0
Cre04.g217912 Chlamydomonas reinhardtii HOM05D007137 ORTHO05D008982 1.1e-09 68.6 90 38.9
Rhsim03G0024500 Rhododendron simsii HOM05D007137 ORTHO05D008982 2.1e-08 64.3 49 61.2
Zm00001eb286980 Zea mays HOM05D007137 ORTHO05D008982 7.6e-06 55.8 32 62.5


User provided reference genes

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