Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold105G30405 Striga asiatica HOM05D004316 ORTHO05D005149 1.3e-202 709.5 359 100.0
SGA_v2.0_scaffold66G22353 Striga asiatica HOM05D004316 ORTHO05D005149 2.6e-195 685.3 358 97.5
SGA_v2.0_scaffold5252G54614 Striga asiatica HOM05D004316 ORTHO05D005149 1.1e-164 583.6 300 98.7
Migut.J01754 Erythranthe guttata HOM05D004316 ORTHO05D005149 2.4e-116 422.9 364 63.5
MSTRG.6426 Avicennia marina HOM05D004316 ORTHO05D005149 9.8e-110 401.0 366 60.1
SalBow6G3548 Salvia bowleyana HOM05D004316 ORTHO05D005149 2.8e-109 399.4 369 59.3
MSTRG.19858 Avicennia marina HOM05D004316 ORTHO05D005149 1.1e-108 397.5 365 59.2
Oeu023579.1 Olea europaea HOM05D004316 ORTHO05D005149 1.0e-106 391.0 364 56.6
Oeu033010.1 Olea europaea HOM05D004316 ORTHO05D005149 4.2e-105 385.6 365 55.9
TAR633G0189 Trochodendron aralioides HOM05D004316 ORTHO05D005149 1.5e-102 377.1 364 54.7
CSS0028183 Camellia sinensis var. sinensis HOM05D004316 ORTHO05D005149 6.3e-101 371.7 365 56.4
COL.COLO4_28298 Corchorus olitorius HOM05D004316 ORTHO05D005149 5.6e-97 358.6 368 53.5
CiPaw.10G033700 Carya illinoinensis HOM05D004316 ORTHO05D005149 2.1e-96 356.7 372 54.8
Peaxi162Scf00130g00012 Petunia axillaris HOM05D004316 ORTHO05D005149 2.8e-96 356.3 368 53.3
Cfa016810 Carpinus fangiana HOM05D004316 ORTHO05D005149 1.0e-95 354.4 369 54.5
Haze_19850 Corylus avellana HOM05D004316 ORTHO05D005149 5.2e-95 352.1 370 54.6
QL07p000671 Quercus lobata HOM05D004316 ORTHO05D005149 5.2e-95 352.1 374 53.2
Thecc.05G152800 Theobroma cacao HOM05D004316 ORTHO05D005149 1.5e-94 350.5 367 52.9
CiPaw.09G038700 Carya illinoinensis HOM05D004316 ORTHO05D005149 3.4e-94 349.4 371 53.4
DCAR_013604 Daucus carota HOM05D004316 ORTHO05D005149 4.4e-94 349.0 363 50.7
Nitab4.5_0013624g0010 Nicotiana tabacum HOM05D004316 ORTHO05D005149 4.4e-94 349.0 367 51.8
Duzib128G1660 Durio zibethinus HOM05D004316 ORTHO05D005149 7.5e-94 348.2 368 52.2
Gorai.002G147000 Gossypium raimondii HOM05D004316 ORTHO05D005149 9.8e-94 347.8 366 52.2
Duzib152G0001 Durio zibethinus HOM05D004316 ORTHO05D005149 1.3e-93 347.4 366 52.2
Lju124C42T7 Lonicera japonica HOM05D004316 ORTHO05D005149 1.3e-93 347.4 365 52.9
Gohir.D01G120400 Gossypium hirsutum HOM05D004316 ORTHO05D005149 1.7e-93 347.1 366 51.9
Nitab4.5_0000586g0080 Nicotiana tabacum HOM05D004316 ORTHO05D005149 2.4e-92 343.2 364 51.6
Gohir.A01G131000 Gossypium hirsutum HOM05D004316 ORTHO05D005149 3.2e-92 342.8 366 51.9
Duzib093G1448 Durio zibethinus HOM05D004316 ORTHO05D005149 5.4e-92 342.0 366 51.1
Dinv39612 Davidia involucrata HOM05D004316 ORTHO05D005149 7.0e-92 341.7 365 51.8
Sabra06G0035000 Salix brachista HOM05D004316 ORTHO05D005149 9.2e-92 341.3 367 51.8
Manes.09G020900 Manihot esculenta HOM05D004316 ORTHO05D005149 1.6e-91 340.5 371 51.2
Sabra16G0058800 Salix brachista HOM05D004316 ORTHO05D005149 1.6e-91 340.5 374 51.3
Potri.006G050100 Populus trichocarpa HOM05D004316 ORTHO05D005149 1.0e-90 337.8 372 52.4
Rhsim03G0025000 Rhododendron simsii HOM05D004316 ORTHO05D005149 1.0e-90 337.8 346 53.8
Lsat_1_v5_gn_8_81220 Lactuca sativa HOM05D004316 ORTHO05D005149 1.7e-90 337.0 377 49.9
Potri.016G056300 Populus trichocarpa HOM05D004316 ORTHO05D005149 3.0e-90 336.3 372 51.1
Atru.chr1.1110 Acer truncatum HOM05D004316 ORTHO05D005149 6.6e-90 335.1 375 51.5
PGSC0003DMG400027281 Solanum tuberosum HOM05D004316 ORTHO05D005149 3.3e-89 332.8 382 51.8
Dinv12489 Davidia involucrata HOM05D004316 ORTHO05D005149 5.6e-89 332.0 355 51.0
Duzib106G1406 Durio zibethinus HOM05D004316 ORTHO05D005149 2.1e-88 330.1 366 50.0
TAR623G0492 Trochodendron aralioides HOM05D004316 ORTHO05D005149 2.8e-88 329.7 369 51.5
Nn2g15213 Nelumbo nucifera HOM05D004316 ORTHO05D005149 3.6e-88 329.3 381 50.7
Prupe.7G058900 Prunus persica HOM05D004316 ORTHO05D005149 3.6e-88 329.3 360 51.9
Lsat_1_v5_gn_9_29201 Lactuca sativa HOM05D004316 ORTHO05D005149 1.8e-87 327.0 371 48.8
unitig_22.g6044 Utricularia gibba HOM05D004316 ORTHO05D005149 5.2e-87 325.5 368 49.2
CANSAT80G0327 Cannabis sativa HOM05D004316 ORTHO05D005149 8.9e-87 324.7 368 51.4
RcHm_v2.0_Chr3g0482601 Rosa chinensis HOM05D004316 ORTHO05D005149 8.9e-87 324.7 369 52.0
Cc06_g17600 Coffea canephora HOM05D004316 ORTHO05D005149 1.2e-86 324.3 305 57.4
Lsat_1_v5_gn_5_161320 Lactuca sativa HOM05D004316 ORTHO05D005149 1.5e-86 323.9 373 49.1
Ciclev10004677m.g Citrus clementina HOM05D004316 ORTHO05D005149 3.4e-86 322.8 406 48.3
Nitab4.5_0000082g0160 Nicotiana tabacum HOM05D004316 ORTHO05D005149 3.4e-86 322.8 359 48.7
Nn7g36300 Nelumbo nucifera HOM05D004316 ORTHO05D005149 5.8e-86 322.0 382 48.7
Sed0026358 Sechium edule HOM05D004316 ORTHO05D005149 7.5e-86 321.6 362 50.6
THA.LOC104802092 Tarenaya hassleriana HOM05D004316 ORTHO05D005149 9.8e-86 321.2 374 49.2
ClCG04G000170 Citrullus lanatus HOM05D004316 ORTHO05D005149 1.7e-85 320.5 367 51.0
MELO3C023147.2 Cucumis melo HOM05D004316 ORTHO05D005149 8.3e-85 318.2 367 49.3
MD12G1074600 Malus domestica HOM05D004316 ORTHO05D005149 1.4e-84 317.4 365 50.4
MD14G1072700 Malus domestica HOM05D004316 ORTHO05D005149 1.9e-84 317.0 365 50.7
CsaV3_4G011650 Cucumis sativus L. HOM05D004316 ORTHO05D005149 5.4e-84 315.5 366 49.2
PGR004G2076 Punica granatum HOM05D004316 ORTHO05D005149 7.0e-84 315.1 368 50.5
TWI53G1538 Tripterygium wilfordii HOM05D004316 ORTHO05D005149 2.7e-83 313.2 359 50.1
Thhalv10006507m.g Eutrema salsugineum HOM05D004316 ORTHO05D005149 3.9e-82 309.3 364 47.0
Gohir.A11G312700 Gossypium hirsutum HOM05D004316 ORTHO05D005149 3.9e-82 309.3 367 49.0
HanXRQChr10g0296681 Helianthus annuus HOM05D004316 ORTHO05D005149 1.5e-81 307.4 371 49.1
arahy.Tifrunner.gnm1.ann1.WY7AF9 Arachis hypogaea HOM05D004316 ORTHO05D005149 1.9e-81 307.0 376 47.3
Sopen04g007890 Solanum pennellii HOM05D004316 ORTHO05D005149 1.9e-81 307.0 353 51.6
Gohir.D11G329400 Gossypium hirsutum HOM05D004316 ORTHO05D005149 9.5e-81 304.7 367 48.5
AL5G38930 Arabidopsis lyrata HOM05D004316 ORTHO05D005149 3.6e-80 302.8 375 47.2
CARHR167600 Cardamine hirsuta HOM05D004316 ORTHO05D005149 6.2e-80 302.0 366 48.6
Gorai.007G360600 Gossypium raimondii HOM05D004316 ORTHO05D005149 6.2e-80 302.0 367 47.7
arahy.Tifrunner.gnm1.ann1.7DG8CI Arachis hypogaea HOM05D004316 ORTHO05D005149 1.1e-79 301.2 374 47.6
Lj1g0001621 Lotus japonicus HOM05D004316 ORTHO05D005149 1.1e-79 301.2 362 48.6
THA.LOC104824440 Tarenaya hassleriana HOM05D004316 ORTHO05D005149 1.1e-79 301.2 369 46.6
FAN05G0825 Fragaria x ananassa HOM05D004316 ORTHO05D005149 3.1e-79 299.7 378 47.4
HanXRQChr13g0395921 Helianthus annuus HOM05D004316 ORTHO05D005149 3.1e-79 299.7 378 46.6
Aa31LG10G12240 Aethionema arabicum HOM05D004316 ORTHO05D005149 5.2e-79 298.9 369 46.9
Glyma.02G184700 Glycine max HOM05D004316 ORTHO05D005149 5.2e-79 298.9 364 48.4
AT3G57400 Arabidopsis thaliana HOM05D004316 ORTHO05D005149 6.8e-79 298.5 373 46.1
BcaC02g09937 Brassica carinata HOM05D004316 ORTHO05D005149 6.8e-79 298.5 363 47.4
C04p35000 Brassica napus HOM05D004316 ORTHO05D005149 6.8e-79 298.5 363 47.4
BolC4t25057H Brassica oleracea HOM05D004316 ORTHO05D005149 6.8e-79 298.5 363 47.4
Manes.08G051300 Manihot esculenta HOM05D004316 ORTHO05D005149 8.9e-79 298.1 367 46.3
TWI74G1076 Tripterygium wilfordii HOM05D004316 ORTHO05D005149 1.5e-78 297.4 365 48.8
Eucgr.A02343 Eucalyptus grandis HOM05D004316 ORTHO05D005149 5.8e-78 295.4 325 53.5
ECA248G0930 Erigeron canadensis HOM05D004316 ORTHO05D005149 1.7e-77 293.9 406 44.1
Sp5g05200 Schrenkiella parvula HOM05D004316 ORTHO05D005149 1.7e-77 293.9 369 45.8
PGSC0003DMG400008166 Solanum tuberosum HOM05D004316 ORTHO05D005149 1.4e-76 290.8 351 47.6
A04p03150 Brassica napus HOM05D004316 ORTHO05D005149 1.9e-76 290.4 366 45.6
FAN02G3785 Fragaria x ananassa HOM05D004316 ORTHO05D005149 3.2e-76 289.7 373 47.2
AUR62026044 Chenopodium quinoa HOM05D004316 ORTHO05D005149 7.1e-76 288.5 372 48.4
BcaB02g08317 Brassica carinata HOM05D004316 ORTHO05D005149 2.1e-75 287.0 362 46.4
A07p23380 Brassica napus HOM05D004316 ORTHO05D005149 2.1e-75 287.0 368 44.3
BolC8t50893H Brassica oleracea HOM05D004316 ORTHO05D005149 2.7e-75 286.6 359 45.7
AUR62024455 Chenopodium quinoa HOM05D004316 ORTHO05D005149 3.5e-75 286.2 373 48.3
Lalb_Chr20g0110531 Lupinus albus HOM05D004316 ORTHO05D005149 4.6e-75 285.8 381 45.7
BcaB02g07608 Brassica carinata HOM05D004316 ORTHO05D005149 6.0e-75 285.4 370 44.6
Cpa.g.sc33.204 Carica papaya HOM05D004316 ORTHO05D005149 1.0e-74 284.6 291 54.0
Aqoxy1G00235 Aquilegia oxysepala HOM05D004316 ORTHO05D005149 1.3e-74 284.3 366 45.1
Glyma.19G138200 Glycine max HOM05D004316 ORTHO05D005149 1.3e-74 284.3 370 44.3
C08p32820 Brassica napus HOM05D004316 ORTHO05D005149 1.7e-74 283.9 359 45.4
Glyma.03G136300 Glycine max HOM05D004316 ORTHO05D005149 1.7e-74 283.9 370 46.2
BraA07t30003Z Brassica rapa HOM05D004316 ORTHO05D005149 8.6e-74 281.6 366 42.9
Lalb_Chr01g0017331 Lupinus albus HOM05D004316 ORTHO05D005149 8.6e-74 281.6 370 45.1
VMungo0720G0980 Vigna mungo HOM05D004316 ORTHO05D005149 1.5e-73 280.8 359 47.4
Ah.13g076490 Amaranthus hybridus HOM05D004316 ORTHO05D005149 2.1e-72 276.9 368 45.1
EL10Ac3g07095 Beta vulgaris HOM05D004316 ORTHO05D005149 2.8e-72 276.6 370 45.1
Medtr7g091450 Medicago truncatula HOM05D004316 ORTHO05D005149 2.4e-71 273.5 360 46.7
A09p50290 Brassica napus HOM05D004316 ORTHO05D005149 3.1e-71 273.1 358 45.3
BraA09t40480Z Brassica rapa HOM05D004316 ORTHO05D005149 3.1e-71 273.1 358 45.3
PSO384G0452 Papaver somniferum HOM05D004316 ORTHO05D005149 3.1e-71 273.1 383 40.7
Lalb_Chr25g0287141 Lupinus albus HOM05D004316 ORTHO05D005149 8.9e-71 271.6 375 44.3
PSO339G4967 Papaver somniferum HOM05D004316 ORTHO05D005149 2.0e-70 270.4 387 40.6
Psat3g072520 Pisum sativum HOM05D004316 ORTHO05D005149 3.4e-70 269.6 347 46.7
FAN09G3682 Fragaria x ananassa HOM05D004316 ORTHO05D005149 6.4e-69 265.4 350 46.9
unitig_8.g3507 Utricularia gibba HOM05D004316 ORTHO05D005149 1.1e-68 264.6 297 48.1
Carub.0005s2424 Capsella rubella HOM05D004316 ORTHO05D005149 4.2e-68 262.7 385 42.1
CAN.G676.33 Capsicum annuum HOM05D004316 ORTHO05D005149 7.1e-68 261.9 308 48.4
ECA247G0299 Erigeron canadensis HOM05D004316 ORTHO05D005149 2.1e-67 260.4 371 43.4
FvH4_6g23940 Fragaria vesca HOM05D004316 ORTHO05D005149 2.7e-67 260.0 352 45.7
FAN14G3684 Fragaria x ananassa HOM05D004316 ORTHO05D005149 7.8e-67 258.5 352 45.5
vmacro07846 Vaccinium macrocarpon HOM05D004316 ORTHO05D005149 3.0e-66 256.5 360 43.9
VMungo1383G1866 Vigna mungo HOM05D004316 ORTHO05D005149 3.0e-66 256.5 365 43.3
Solyc10g079390.1 Solanum lycopersicum HOM05D004316 ORTHO05D005149 5.6e-65 252.3 299 46.8
BcaC07g40393 Brassica carinata HOM05D004316 ORTHO05D005149 9.0e-63 245.0 360 41.4
Actinidia39222 Actinidia chinensis HOM05D004316 ORTHO05D005149 4.4e-62 242.7 231 56.7
HanXRQChr05g0131861 Helianthus annuus HOM05D004316 ORTHO05D005149 3.8e-61 239.6 361 42.4
Ca_08453_v3 Cicer arietinum L. HOM05D004316 ORTHO05D005149 8.4e-61 238.4 314 44.3
BcaC08g44838 Brassica carinata HOM05D004316 ORTHO05D005149 1.1e-60 238.0 306 44.8
C06p24450 Brassica napus HOM05D004316 ORTHO05D005149 1.1e-60 238.0 306 44.8
BolC6t37592H Brassica oleracea HOM05D004316 ORTHO05D005149 1.1e-60 238.0 306 44.8
Phvul.001G131600 Phaseolus vulgaris HOM05D004316 ORTHO05D005149 9.3e-60 235.0 310 45.5
TPR.G3718 Trifolium pratense HOM05D004316 ORTHO05D005149 2.3e-58 230.3 332 42.8
AT5G52500 Arabidopsis thaliana HOM05D004316 ORTHO05D005149 3.9e-58 229.6 305 41.0
Sc19g0006560 Simmondsia chinensis HOM05D004316 ORTHO05D005149 1.1e-55 221.5 367 38.1
CDE08G1472 Ceratophyllum demersum HOM05D004316 ORTHO05D005149 6.9e-47 192.2 289 37.0
CDE09G0122 Ceratophyllum demersum HOM05D004316 ORTHO05D005149 2.0e-46 190.7 285 36.8
SEGI_13236 Sequoiadendron giganteum HOM05D004316 ORTHO05D005149 2.2e-45 187.2 443 34.1
SEGI_35991 Sequoiadendron giganteum HOM05D004316 ORTHO05D005149 2.2e-45 187.2 443 34.1
ATR0782G190 Amborella trichopoda HOM05D004316 ORTHO05D005149 1.1e-44 184.9 403 35.2
Solyc04g015850.3 Solanum lycopersicum HOM05D004316 ORTHO05D005149 1.6e-43 181.0 197 51.8
AL8G26960 Arabidopsis lyrata HOM05D004316 ORTHO05D005149 5.0e-37 159.5 181 47.5
AL205U10010 Arabidopsis lyrata HOM05D004316 ORTHO05D005149 1.4e-36 157.9 182 47.8
Pp3c20_13470 Physcomitrium patens HOM05D004316 ORTHO05D005149 2.1e-35 154.1 415 29.6
Pp3c23_16170 Physcomitrium patens HOM05D004316 ORTHO05D005149 5.1e-34 149.4 415 29.4
Pp3c8_14130 Physcomitrium patens HOM05D004316 ORTHO05D005149 1.1e-33 148.3 429 28.7
Pp3c5_24720 Physcomitrium patens HOM05D004316 ORTHO05D005149 5.7e-33 146.0 478 28.7
Pp3c13_6400 Physcomitrium patens HOM05D004316 ORTHO05D005149 3.7e-32 143.3 223 40.8
Pp3c3_2450 Physcomitrium patens HOM05D004316 ORTHO05D005149 1.4e-31 141.4 216 39.8
Mapoly0052s0060 Marchantia polymorpha HOM05D004316 ORTHO05D005149 1.2e-30 138.3 485 27.2
AagrBONN_evm.TU.Sc2ySwM_362.2535 Anthoceros agrestis HOM05D004316 ORTHO05D005149 2.7e-27 127.1 501 26.1
SMO201G0108 Selaginella moellendorffii HOM05D004316 ORTHO05D005149 5.1e-26 122.9 474 26.8
Mapoly0109s0039 Marchantia polymorpha HOM05D004316 ORTHO05D005149 2.5e-25 120.6 206 38.3
Pp3c6_3920 Physcomitrium patens HOM05D004316 ORTHO05D005149 1.2e-22 111.7 218 34.4
SEGI_09580 Sequoiadendron giganteum HOM05D004316 ORTHO05D005149 4.7e-19 99.8 123 45.5
GSVIVG01033262001 Vitis vinifera HOM05D004316 ORTHO05D005149 6.3e-16 89.4 124 41.9
BcaC02g09938 Brassica carinata HOM05D004316 ORTHO05D005149 1.4e-10 71.6 59 64.4
Nn1g05572 Nelumbo nucifera HOM05D004316 ORTHO05D022954 1.5e-09 68.2 88 42.0
Actinidia39221 Actinidia chinensis HOM05D004316 ORTHO05D005149 2.6e-09 67.4 75 49.3
SEGI_40609 Sequoiadendron giganteum HOM05D004316 ORTHO05D005149 6.3e-08 62.8 80 45.0


User provided reference genes

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