Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold105G30375 Striga asiatica HOM05D007911 ORTHO05D009536 0.0e+00 1201.4 645 100.0
MSTRG.6410 Avicennia marina HOM05D007911 ORTHO05D009536 2.2e-43 181.4 631 30.4
SGA_v2.0_scaffold69G23124 Striga asiatica HOM05D007911 ORTHO05D009536 2.4e-42 177.9 133 66.9
SalBow6G0990 Salvia bowleyana HOM05D007911 ORTHO05D009536 5.1e-32 143.7 387 32.6
SalBow6G1456 Salvia bowleyana HOM05D007911 ORTHO05D009536 5.6e-31 140.2 383 32.4
Oeu035501.1 Olea europaea HOM05D007911 ORTHO05D009536 1.4e-26 125.6 147 44.9
Prupe.7G054000 Prunus persica HOM05D007911 ORTHO05D009536 2.6e-20 104.8 232 34.9
Potri.016G043300 Populus trichocarpa HOM05D007911 ORTHO05D009536 7.6e-20 103.2 204 34.8
Hma1.2p1_0005F.1_g004500 Hydrangea macrophylla HOM05D007911 ORTHO05D009536 1.7e-19 102.1 126 44.4
Manes.08G052400 Manihot esculenta HOM05D007911 ORTHO05D009536 2.9e-19 101.3 127 43.3
Actinidia39204 Actinidia chinensis HOM05D007911 ORTHO05D009536 1.1e-18 99.4 145 40.0
CSS0030068 Camellia sinensis var. sinensis HOM05D007911 ORTHO05D009536 1.4e-18 99.0 135 43.0
Haze_19798 Corylus avellana HOM05D007911 ORTHO05D009536 1.9e-18 98.6 204 36.8
Actinidia09304 Actinidia chinensis HOM05D007911 ORTHO05D009536 9.2e-18 96.3 145 40.0
QL07p003623 Quercus lobata HOM05D007911 ORTHO05D009536 9.2e-18 96.3 207 32.9
Cfa016782 Carpinus fangiana HOM05D007911 ORTHO05D009536 2.3e-16 91.7 320 30.0
COL.COLO4_33204 Corchorus olitorius HOM05D007911 ORTHO05D009536 3.9e-16 90.9 153 37.9
Nitab4.5_0001618g0290 Nicotiana tabacum HOM05D017238 ORTHO05D009536 3.9e-16 90.9 149 37.6
TAR636G2018 Trochodendron aralioides HOM05D007911 ORTHO05D009536 1.1e-15 89.4 193 31.6
Atru.chr12.1999 Acer truncatum HOM05D007911 ORTHO05D009536 1.9e-15 88.6 204 33.3
Gohir.A01G130811 Gossypium hirsutum HOM05D007911 ORTHO05D009536 1.9e-15 88.6 202 33.7
Thecc.05G151800 Theobroma cacao HOM05D007911 ORTHO05D009536 2.5e-15 88.2 334 29.9
Nitab4.5_0000826g0230 Nicotiana tabacum HOM05D017238 ORTHO05D009536 3.3e-15 87.8 146 37.7
vmacro21970 Vaccinium macrocarpon HOM05D007911 ORTHO05D009536 5.6e-15 87.0 312 28.8
Gorai.002G146100 Gossypium raimondii HOM05D007911 ORTHO05D009536 7.3e-15 86.7 215 31.6
Peaxi162Scf00130g00827 Petunia axillaris HOM05D017238 ORTHO05D009536 9.6e-15 86.3 115 41.7
TWI53G0905 Tripterygium wilfordii HOM05D007911 ORTHO05D009536 9.6e-15 86.3 200 31.0
CiPaw.09G040100 Carya illinoinensis HOM05D007911 ORTHO05D009536 1.2e-14 85.9 324 28.4
Sabra06G0032200 Salix brachista HOM05D007911 ORTHO05D009536 1.2e-14 85.9 226 31.4
Potri.006G046700 Populus trichocarpa HOM05D007911 ORTHO05D009536 1.6e-14 85.5 206 33.0
Solyc04g016290.3 Solanum lycopersicum HOM05D017238 ORTHO05D009536 1.6e-14 85.5 112 46.4
Atru.chr1.1239 Acer truncatum HOM05D007911 ORTHO05D009536 6.2e-14 83.6 115 42.6
CAN.G676.9 Capsicum annuum HOM05D017238 ORTHO05D009536 8.1e-14 83.2 79 54.4
Cc06_g17980 Coffea canephora HOM05D007911 ORTHO05D009536 8.1e-14 83.2 114 40.4
Gohir.D01G119650 Gossypium hirsutum HOM05D007911 ORTHO05D009536 8.1e-14 83.2 210 31.4
Rhsim03G0028700 Rhododendron simsii HOM05D007911 ORTHO05D009536 8.1e-14 83.2 308 27.9
VMungo1383G2470 Vigna mungo HOM05D007911 ORTHO05D009536 1.1e-13 82.8 149 36.9
Duzib093G1996 Durio zibethinus HOM05D007911 ORTHO05D009536 1.8e-13 82.0 359 27.0
Lalb_Chr01g0017411 Lupinus albus HOM05D007911 ORTHO05D009536 1.8e-13 82.0 111 43.2
Sopen04g008390 Solanum pennellii HOM05D017238 ORTHO05D009536 1.8e-13 82.0 219 31.1
arahy.Tifrunner.gnm1.ann1.BL1IZ1 Arachis hypogaea HOM05D007911 ORTHO05D009536 3.1e-13 81.3 115 41.7
Ca_08429_v3 Cicer arietinum L. HOM05D007911 ORTHO05D009536 4.0e-13 80.9 113 39.8
Ciclev10006879m.g Citrus clementina HOM05D007911 ORTHO05D009536 4.0e-13 80.9 116 37.9
Eucgr.A02312 Eucalyptus grandis HOM05D007911 ORTHO05D009536 4.0e-13 80.9 160 35.0
CANSAT80G2434 Cannabis sativa HOM05D007911 ORTHO05D009536 5.3e-13 80.5 211 29.4
Glyma.03G133900 Glycine max HOM05D007911 ORTHO05D009536 6.9e-13 80.1 119 37.8
arahy.Tifrunner.gnm1.ann1.18RKPD Arachis hypogaea HOM05D007911 ORTHO05D009536 9.0e-13 79.7 115 41.7
CANSAT80G1261 Cannabis sativa HOM05D007911 ORTHO05D009536 9.0e-13 79.7 211 29.4
Cpa.g.sc1210.2 Carica papaya HOM05D007911 ORTHO05D009536 1.2e-12 79.3 110 41.8
AUR62026093 Chenopodium quinoa HOM05D021336 ORTHO05D009536 2.0e-12 78.6 219 29.7
Nn2g15134 Nelumbo nucifera HOM05D007911 ORTHO05D009536 2.0e-12 78.6 119 39.5
EL10Ac3g07134 Beta vulgaris HOM05D021336 ORTHO05D009536 2.6e-12 78.2 172 33.1
Lalb_Chr25g0287291 Lupinus albus HOM05D007911 ORTHO05D009536 2.6e-12 78.2 118 40.7
Hund24682 Selenicereus undatus HOM05D007911 ORTHO05D009536 4.4e-12 77.4 107 38.3
Psat3g074440 Pisum sativum HOM05D007911 ORTHO05D009536 9.9e-12 76.3 142 35.9
Hund19135 Selenicereus undatus HOM05D021336 ORTHO05D009536 9.9e-12 76.3 222 28.8
TPR.G18258 Trifolium pratense HOM05D007911 ORTHO05D009536 9.9e-12 76.3 113 38.9
Phvul.001G129400 Phaseolus vulgaris HOM05D007911 ORTHO05D009536 1.3e-11 75.9 149 34.2
PGR004G0024 Punica granatum HOM05D007911 ORTHO05D009536 2.2e-11 75.1 130 36.2
VMungo0720G0307 Vigna mungo HOM05D007911 ORTHO05D009536 4.9e-11 73.9 110 40.0
Lj1g0009156 Lotus japonicus HOM05D007911 ORTHO05D009536 6.4e-11 73.6 145 33.8
arahy.Tifrunner.gnm1.ann1.XA9LH2 Arachis hypogaea HOM05D007911 ORTHO05D009536 1.1e-10 72.8 107 41.1
ClCG04G003660 Citrullus lanatus HOM05D007911 ORTHO05D009536 1.1e-10 72.8 342 28.1
Glyma.19G136200 Glycine max HOM05D007911 ORTHO05D009536 1.4e-10 72.4 113 35.4
Medtr7g091040 Medicago truncatula HOM05D007911 ORTHO05D009536 2.4e-10 71.6 109 37.6
TWI77G0280 Tripterygium wilfordii HOM05D007911 ORTHO05D009536 2.4e-10 71.6 197 28.4
MELO3C026340.2 Cucumis melo HOM05D007911 ORTHO05D009536 3.2e-10 71.2 342 25.7
Sc13g0001600 Simmondsia chinensis HOM05D007911 ORTHO05D009536 5.4e-10 70.5 172 33.1
Duzib106G0073 Durio zibethinus HOM05D007911 ORTHO05D009536 1.2e-09 69.3 114 40.4
AUR62024506 Chenopodium quinoa HOM05D021336 ORTHO05D009536 3.5e-09 67.8 114 34.2
Lsat_1_v5_gn_9_31060 Lactuca sativa HOM05D007911 ORTHO05D009536 7.8e-09 66.6 110 40.0
RcHm_v2.0_Chr3g0483481 Rosa chinensis HOM05D020102 ORTHO05D009536 7.8e-09 66.6 347 26.2
Sed0016742 Sechium edule HOM05D007911 ORTHO05D009536 7.8e-09 66.6 98 39.8
FAN09G4584 Fragaria x ananassa HOM05D020102 ORTHO05D009536 1.0e-08 66.2 107 35.5
PSO339G2888 Papaver somniferum HOM05D007911 ORTHO05D009536 3.9e-08 64.3 130 33.8
FvH4_6g24470 Fragaria vesca HOM05D020102 ORTHO05D009536 1.1e-07 62.8 98 35.7
Aqoxy1G00297 Aquilegia oxysepala HOM05D007911 ORTHO05D009536 1.5e-07 62.4 118 36.4
FAN14G4000 Fragaria x ananassa HOM05D020102 ORTHO05D009536 1.9e-07 62.0 98 34.7
Nitab4.5_0000677g0260 Nicotiana tabacum HOM05D029882 ORTHO05D009536 1.3e-06 59.3 76 47.4
Ah.04g151450 Amaranthus hybridus HOM05D021336 ORTHO05D009536 2.8e-06 58.2 76 42.1


User provided reference genes

Program Settings