Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold105G30359 Striga asiatica HOM05D003740 ORTHO05D004611 8.9e-232 806.6 416 100.0
Migut.J01706 Erythranthe guttata HOM05D003740 ORTHO05D004611 1.0e-198 696.8 400 88.2
Migut.K00119 Erythranthe guttata HOM05D003740 ORTHO05D004611 3.4e-191 671.8 401 86.0
MSTRG.26143 Avicennia marina HOM05D003740 ORTHO05D004611 3.6e-188 661.8 399 83.7
MSTRG.10801 Avicennia marina HOM05D003740 ORTHO05D004611 2.3e-187 659.1 400 83.5
Oeu006922.2 Olea europaea HOM05D003740 ORTHO05D004611 1.1e-184 650.2 404 81.9
Prupe.7G050100 Prunus persica HOM05D003740 ORTHO05D004611 6.9e-184 647.5 408 81.1
Peaxi162Scf00130g01015 Petunia axillaris HOM05D003740 ORTHO05D004611 3.4e-183 645.2 406 82.8
Dinv34246 Davidia involucrata HOM05D003740 ORTHO05D004611 2.2e-182 642.5 407 80.8
Dinv05312 Davidia involucrata HOM05D003740 ORTHO05D004611 6.5e-182 641.0 406 80.8
MD14G1080600 Malus domestica HOM05D003740 ORTHO05D004611 8.5e-182 640.6 405 81.2
MD12G1086200 Malus domestica HOM05D003740 ORTHO05D004611 4.2e-181 638.3 404 80.0
Prupe.1G032300 Prunus persica HOM05D003740 ORTHO05D004611 9.4e-181 637.1 408 80.1
Actinidia38142 Actinidia chinensis HOM05D003740 ORTHO05D004611 1.2e-180 636.7 403 80.4
Sopen04g008590 Solanum pennellii HOM05D003740 ORTHO05D004611 1.6e-180 636.3 407 80.6
FAN09G1292 Fragaria x ananassa HOM05D003740 ORTHO05D004611 3.6e-180 635.2 399 80.2
FAN05G1357 Fragaria x ananassa HOM05D003740 ORTHO05D004611 1.8e-179 632.9 399 80.5
DCAR_020539 Daucus carota HOM05D003740 ORTHO05D004611 2.3e-179 632.5 411 79.1
QL07p005086 Quercus lobata HOM05D003740 ORTHO05D004611 2.3e-179 632.5 372 85.8
MELO3C014202.2 Cucumis melo HOM05D003740 ORTHO05D004611 3.9e-179 631.7 405 78.8
Actinidia39193 Actinidia chinensis HOM05D003740 ORTHO05D004611 6.7e-179 630.9 399 79.4
FvH4_6g24760 Fragaria vesca HOM05D003740 ORTHO05D004611 6.7e-179 630.9 399 79.9
RcHm_v2.0_Chr3g0484361 Rosa chinensis HOM05D003740 ORTHO05D004611 8.8e-179 630.6 404 79.2
FAN14G5242 Fragaria x ananassa HOM05D003740 ORTHO05D004611 1.1e-178 630.2 399 79.9
Medtr3g045150 Medicago truncatula HOM05D003740 ORTHO05D004611 1.1e-178 630.2 401 79.6
CsaV3_4G027630 Cucumis sativus L. HOM05D003740 ORTHO05D004611 2.0e-178 629.4 405 78.5
Eucgr.A02296 Eucalyptus grandis HOM05D003740 ORTHO05D004611 3.3e-178 628.6 408 78.7
Sed0006234 Sechium edule HOM05D003740 ORTHO05D004611 3.3e-178 628.6 407 80.3
CSS0019779 Camellia sinensis var. sinensis HOM05D003740 ORTHO05D004611 5.7e-178 627.9 410 78.3
Medtr0012s0090 Medicago truncatula HOM05D003740 ORTHO05D004611 1.7e-177 626.3 401 79.1
ClCG04G004010 Citrullus lanatus HOM05D003740 ORTHO05D004611 3.7e-177 625.2 405 78.0
PGR004G2716 Punica granatum HOM05D003740 ORTHO05D004611 6.3e-177 624.4 406 79.1
Atru.chr6.1381 Acer truncatum HOM05D003740 ORTHO05D004611 1.1e-176 623.6 400 80.0
Sed0013360 Sechium edule HOM05D003740 ORTHO05D004611 1.1e-176 623.6 406 78.6
Haze_19750 Corylus avellana HOM05D003740 ORTHO05D004611 1.8e-176 622.9 403 79.7
Gohir.D09G116000 Gossypium hirsutum HOM05D003740 ORTHO05D004611 1.8e-176 622.9 399 79.2
Thecc.05G145300 Theobroma cacao HOM05D003740 ORTHO05D004611 1.8e-176 622.9 403 79.9
Gohir.A09G119800 Gossypium hirsutum HOM05D003740 ORTHO05D004611 2.4e-176 622.5 399 79.2
Duzib128G1723 Durio zibethinus HOM05D003740 ORTHO05D004611 4.1e-176 621.7 404 78.5
Rhsim03G0031000 Rhododendron simsii HOM05D003740 ORTHO05D004611 4.1e-176 621.7 399 79.2
Cfa016754 Carpinus fangiana HOM05D003740 ORTHO05D004611 5.3e-176 621.3 403 79.4
Lj5g0015883 Lotus japonicus HOM05D003740 ORTHO05D004611 5.3e-176 621.3 400 78.8
Manes.08G053600 Manihot esculenta HOM05D003740 ORTHO05D004611 5.3e-176 621.3 405 77.8
Rhsim04G0107900 Rhododendron simsii HOM05D003740 ORTHO05D004611 1.2e-175 620.2 366 83.3
GSVIVG01033552001 Vitis vinifera HOM05D003740 ORTHO05D004611 1.2e-175 620.2 369 84.0
TAR636G0750 Trochodendron aralioides HOM05D003740 ORTHO05D004611 2.6e-175 619.0 379 79.9
Ciclev10005020m.g Citrus clementina HOM05D003740 ORTHO05D004611 3.5e-175 618.6 372 83.6
Ca_25790_v3 Cicer arietinum L. HOM05D003740 ORTHO05D004611 4.5e-175 618.2 401 78.3
Phvul.007G249500 Phaseolus vulgaris HOM05D003740 ORTHO05D004611 7.7e-175 617.5 405 78.5
Atru.chr1.1193 Acer truncatum HOM05D003740 ORTHO05D004611 1.3e-174 616.7 400 79.2
VMungo0720G0943 Vigna mungo HOM05D003740 ORTHO05D004611 1.3e-174 616.7 405 78.3
unitig_748.g7227 Utricularia gibba HOM05D003740 ORTHO05D004611 1.7e-174 616.3 398 78.1
Psat6g118200 Pisum sativum HOM05D003740 ORTHO05D004611 2.2e-174 615.9 402 78.1
TPR.G19664 Trifolium pratense HOM05D003740 ORTHO05D004611 3.8e-174 615.1 406 78.1
Solyc04g016520.3 Solanum lycopersicum HOM05D003740 ORTHO05D004611 5.0e-174 614.8 407 78.6
Glyma.02G190700 Glycine max HOM05D003740 ORTHO05D004611 6.5e-174 614.4 405 77.8
Lsat_1_v5_gn_6_15201 Lactuca sativa HOM05D003740 ORTHO05D004611 8.5e-174 614.0 405 77.3
FAN02G1973 Fragaria x ananassa HOM05D003740 ORTHO05D004611 1.1e-173 613.6 416 76.0
Gorai.006G134300 Gossypium raimondii HOM05D003740 ORTHO05D004611 1.5e-173 613.2 399 78.9
arahy.Tifrunner.gnm1.ann1.0DR8LC Arachis hypogaea HOM05D003740 ORTHO05D004611 3.2e-173 612.1 420 75.5
Glyma.10G105900 Glycine max HOM05D003740 ORTHO05D004611 4.2e-173 611.7 407 77.1
TWI53G1619 Tripterygium wilfordii HOM05D003740 ORTHO05D004611 4.2e-173 611.7 408 77.0
CiPaw.09G042200 Carya illinoinensis HOM05D003740 ORTHO05D004611 9.4e-173 610.5 403 78.9
Lalb_Chr21g0316601 Lupinus albus HOM05D003740 ORTHO05D004611 1.2e-172 610.1 391 79.0
RcHm_v2.0_Chr3g0484511 Rosa chinensis HOM05D003740 ORTHO05D004611 1.2e-172 610.1 404 77.7
Lalb_Chr02g0156411 Lupinus albus HOM05D003740 ORTHO05D004611 2.1e-172 609.4 413 76.0
Sc13g0001500 Simmondsia chinensis HOM05D003740 ORTHO05D004611 2.7e-172 609.0 396 77.8
Ah.13g076780 Amaranthus hybridus HOM05D003740 ORTHO05D004611 3.6e-172 608.6 409 77.3
PGSC0003DMG400012722 Solanum tuberosum HOM05D003740 ORTHO05D004611 3.6e-172 608.6 407 78.1
HanXRQChr10g0277771 Helianthus annuus HOM05D003740 ORTHO05D004611 4.7e-172 608.2 401 77.6
arahy.Tifrunner.gnm1.ann1.G7Z7YE Arachis hypogaea HOM05D003740 ORTHO05D004611 6.1e-172 607.8 421 75.3
TWI74G0940 Tripterygium wilfordii HOM05D003740 ORTHO05D004611 8.0e-172 607.4 409 75.6
Nn6g34910 Nelumbo nucifera HOM05D003740 ORTHO05D004611 1.4e-171 606.7 379 80.2
THA.LOC104816968 Tarenaya hassleriana HOM05D003740 ORTHO05D004611 3.0e-171 605.5 399 76.9
TWI77G0796 Tripterygium wilfordii HOM05D003740 ORTHO05D004611 8.8e-171 604.0 408 76.0
Nn7g37216 Nelumbo nucifera HOM05D003740 ORTHO05D004611 2.8e-169 599.0 385 78.7
THA.LOC104803288 Tarenaya hassleriana HOM05D003740 ORTHO05D004611 2.8e-169 599.0 404 76.5
Cc06_g18360 Coffea canephora HOM05D003740 ORTHO05D004611 3.7e-169 598.6 399 77.2
EL10Ac3g07158 Beta vulgaris HOM05D003740 ORTHO05D004611 4.8e-169 598.2 411 75.9
Lj2A390G27 Lonicera japonica HOM05D003740 ORTHO05D004611 4.1e-168 595.1 415 73.7
BolC4t21915H Brassica oleracea HOM05D003740 ORTHO05D004611 5.3e-168 594.7 403 75.4
BraA05t19226Z Brassica rapa HOM05D003740 ORTHO05D004611 5.3e-168 594.7 402 75.9
ECA233G5682 Erigeron canadensis HOM05D003740 ORTHO05D004611 5.3e-168 594.7 400 77.2
A05p02310 Brassica napus HOM05D003740 ORTHO05D004611 7.0e-168 594.3 403 75.4
Sabra16G0047800 Salix brachista HOM05D003740 ORTHO05D004611 9.1e-168 594.0 372 78.8
C04p02750 Brassica napus HOM05D003740 ORTHO05D004611 1.6e-167 593.2 403 75.4
AL4G39580 Arabidopsis lyrata HOM05D003740 ORTHO05D004611 1.0e-166 590.5 412 74.5
AT2G41490 Arabidopsis thaliana HOM05D003740 ORTHO05D004611 1.0e-166 590.5 412 74.3
BcaNung06793 Brassica carinata HOM05D003740 ORTHO05D004611 1.0e-166 590.5 403 75.4
Carub.0004s2379 Capsella rubella HOM05D003740 ORTHO05D004611 1.0e-166 590.5 409 74.8
CARHR136610 Cardamine hirsuta HOM05D003740 ORTHO05D004611 2.2e-166 589.3 411 74.7
Sp4g23760 Schrenkiella parvula HOM05D003740 ORTHO05D004611 3.8e-166 588.6 411 74.7
BraA04t16052Z Brassica rapa HOM05D003740 ORTHO05D004611 8.5e-166 587.4 400 75.8
MBI13_g04792_MAGBIO Magnolia biondii HOM05D003740 ORTHO05D004611 8.5e-166 587.4 411 73.5
Thhalv10007732m.g Eutrema salsugineum HOM05D003740 ORTHO05D004611 1.1e-165 587.0 401 75.6
Thhalv10016688m.g Eutrema salsugineum HOM05D003740 ORTHO05D004611 1.5e-165 586.6 411 74.9
SalBow1G2954 Salvia bowleyana HOM05D003740 ORTHO05D004611 1.5e-165 586.6 430 73.5
Potri.016G042100 Populus trichocarpa HOM05D003740 ORTHO05D004611 2.5e-165 585.9 371 78.2
Potri.006G045700 Populus trichocarpa HOM05D003740 ORTHO05D004611 3.2e-165 585.5 409 72.9
AT3G57220 Arabidopsis thaliana HOM05D003740 ORTHO05D004611 7.2e-165 584.3 421 72.2
BcaB02g08329 Brassica carinata HOM05D003740 ORTHO05D004611 7.2e-165 584.3 372 79.6
CSS0009879 Camellia sinensis var. sinensis HOM05D003740 ORTHO05D004611 9.4e-165 583.9 403 75.7
Nitab4.5_0000826g0260 Nicotiana tabacum HOM05D003740 ORTHO05D004611 9.4e-165 583.9 437 72.1
PSO339G5696 Papaver somniferum HOM05D003740 ORTHO05D004611 1.2e-164 583.6 399 75.2
PSO384G1999 Papaver somniferum HOM05D003740 ORTHO05D004611 1.2e-164 583.6 399 75.4
BcaC02g09904 Brassica carinata HOM05D003740 ORTHO05D004611 3.6e-164 582.0 401 75.1
C04p35340 Brassica napus HOM05D003740 ORTHO05D004611 3.6e-164 582.0 401 75.1
BolC4t25088H Brassica oleracea HOM05D003740 ORTHO05D004611 3.6e-164 582.0 401 75.1
AL5G38710 Arabidopsis lyrata HOM05D003740 ORTHO05D004611 6.1e-164 581.3 420 72.6
C08p32520 Brassica napus HOM05D003740 ORTHO05D004611 1.0e-163 580.5 404 74.5
Carub.0005s2403 Capsella rubella HOM05D003740 ORTHO05D004611 1.8e-163 579.7 407 74.0
A09p50150 Brassica napus HOM05D003740 ORTHO05D004611 2.3e-163 579.3 403 74.7
BraA09t40467Z Brassica rapa HOM05D003740 ORTHO05D004611 2.3e-163 579.3 403 74.7
BolC8t50867H Brassica oleracea HOM05D003740 ORTHO05D004611 3.0e-163 578.9 404 74.3
Thhalv10005999m.g Eutrema salsugineum HOM05D003740 ORTHO05D004611 4.0e-163 578.6 402 74.6
CANSAT80G1617 Cannabis sativa HOM05D003740 ORTHO05D004611 5.7e-162 574.7 401 73.3
AUR62026121 Chenopodium quinoa HOM05D003740 ORTHO05D004611 7.5e-162 574.3 411 72.7
CDE08G1337 Ceratophyllum demersum HOM05D003740 ORTHO05D004611 1.1e-160 570.5 343 82.8
AUR62024529 Chenopodium quinoa HOM05D003740 ORTHO05D004611 1.1e-160 570.5 411 72.5
CAN.G1237.3 Capsicum annuum HOM05D003740 ORTHO05D004611 1.8e-160 569.7 315 88.9
Lj1A1122T44 Lonicera japonica HOM05D003740 ORTHO05D004611 3.1e-160 568.9 411 73.2
CANSAT80G1359 Cannabis sativa HOM05D003740 ORTHO05D004611 1.3e-158 563.5 401 72.3
Aqoxy2G02041 Aquilegia oxysepala HOM05D003740 ORTHO05D004611 6.5e-158 561.2 407 71.7
Aa31LG1G23510 Aethionema arabicum HOM05D003740 ORTHO05D004611 1.5e-157 560.1 405 71.4
A04p03820 Brassica napus HOM05D003740 ORTHO05D004611 5.2e-155 551.6 413 70.9
SEGI_04340 Sequoiadendron giganteum HOM05D003740 ORTHO05D004611 1.5e-154 550.1 399 71.9
TPR.G2316 Trifolium pratense HOM05D003740 ORTHO05D004611 2.2e-153 546.2 372 74.5
Aa31LG10G12120 Aethionema arabicum HOM05D003740 ORTHO05D004611 8.3e-153 544.3 453 65.1
Duzib106G0923 Durio zibethinus HOM05D003740 ORTHO05D004611 2.3e-150 536.2 401 72.1
COL.COLO4_21300 Corchorus olitorius HOM05D003740 ORTHO05D004611 5.0e-150 535.0 360 76.4
Hund19125 Selenicereus undatus HOM05D003740 ORTHO05D004611 2.1e-148 529.6 451 65.6
BcaC07g40064 Brassica carinata HOM05D003740 ORTHO05D004611 9.8e-146 520.8 302 85.4
DCAR_016970 Daucus carota HOM05D003740 ORTHO05D004611 4.9e-145 518.5 409 68.5
TAR633G2274 Trochodendron aralioides HOM05D003740 ORTHO05D004611 7.8e-143 511.1 295 85.4
Os07g0661100 Oryza sativa ssp. japonica HOM05D003740 ORTHO05D004611 1.0e-142 510.8 354 70.9
Zm00001eb110840 Zea mays HOM05D003740 ORTHO05D004611 5.0e-142 508.4 403 65.0
Zm00001eb329870 Zea mays HOM05D003740 ORTHO05D004611 1.2e-140 503.8 373 68.1
ATR0782G053 Amborella trichopoda HOM05D003740 ORTHO05D004611 1.6e-140 503.4 315 79.7
SMO364G0515 Selaginella moellendorffii HOM05D003740 ORTHO05D004611 6.2e-140 501.5 369 68.8
Pp3c2_18380 Physcomitrium patens HOM05D003740 ORTHO05D004611 2.6e-138 496.1 415 64.1
Medtr8g446850 Medicago truncatula HOM05D003740 ORTHO05D004611 5.4e-136 488.4 329 76.3
RcHm_v2.0_Chr3g0484421 Rosa chinensis HOM05D003740 ORTHO05D004611 5.0e-134 481.9 397 67.0
TPR.G11551 Trifolium pratense HOM05D003740 ORTHO05D004611 4.0e-131 472.2 403 64.8
Mapoly0120s0027 Marchantia polymorpha HOM05D003740 ORTHO05D004611 1.2e-130 470.7 418 58.9
SHI12878 Sapria himalayana HOM05D003740 ORTHO05D004611 3.7e-129 465.7 418 60.0
AagrBONN_evm.TU.Sc2ySwM_344.2027 Anthoceros agrestis HOM05D003740 ORTHO05D004611 1.4e-128 463.8 385 62.9
AUR62004393 Chenopodium quinoa HOM05D003740 ORTHO05D004611 2.7e-127 459.5 369 66.9
CARHR167400 Cardamine hirsuta HOM05D003740 ORTHO05D004611 7.8e-127 458.0 348 70.1
vmacro09044 Vaccinium macrocarpon HOM05D003740 ORTHO05D004611 1.9e-120 436.8 241 88.4
AUR62022599 Chenopodium quinoa HOM05D003740 ORTHO05D004611 3.3e-117 426.0 335 66.9
SMO112G0012 Selaginella moellendorffii HOM05D003740 ORTHO05D004611 3.2e-104 382.9 251 75.7
CiPaw.10G036600 Carya illinoinensis HOM05D003740 ORTHO05D004611 3.3e-101 372.9 211 88.6
SGA_v2.0_scaffold69G23130 Striga asiatica HOM05D003740 ORTHO05D004611 1.3e-100 370.9 346 63.0
Sp5g05360 Schrenkiella parvula HOM05D003740 ORTHO05D004611 4.8e-100 369.0 211 85.8
AagrBONN_evm.TU.Sc2ySwM_368.1663 Anthoceros agrestis HOM05D003740 ORTHO05D004611 1.5e-93 347.4 393 49.4
Cre16.g663100 Chlamydomonas reinhardtii HOM05D003740 ORTHO05D004611 3.7e-92 342.8 366 50.8
PRCOL_00006546 Prasinoderma coloniale HOM05D003740 ORTHO05D004611 1.8e-91 340.5 370 51.1
CBR_g48687 Chara braunii HOM05D003740 ORTHO05D004611 3.0e-86 323.2 273 59.0
SEGI_25729 Sequoiadendron giganteum HOM05D003740 ORTHO05D004611 1.9e-72 277.3 178 76.4
Aqoxy6G01654 Aquilegia oxysepala HOM05D003740 ORTHO05D004611 9.1e-67 258.5 222 62.2
Haze_26500 Corylus avellana HOM05D003740 ORTHO05D004611 2.2e-65 253.8 293 47.1
MCO05G206 Micromonas commoda HOM05D003740 ORTHO05D004611 1.3e-60 238.0 282 47.2
Cpa.g.sc120.7 Carica papaya HOM05D003740 ORTHO05D004611 4.1e-59 233.0 131 87.0
HPP92_001282 Vanilla planifolia HOM05D003740 ORTHO05D004611 5.0e-57 226.1 213 56.8
Cfa024885 Carpinus fangiana HOM05D003740 ORTHO05D004611 2.5e-56 223.8 304 41.4
Psat6g050760 Pisum sativum HOM05D003740 ORTHO05D018044 8.2e-52 208.8 120 81.7
AagrBONN_evm.TU.Sc2ySwM_117.4057 Anthoceros agrestis HOM05D003740 ORTHO05D004611 3.8e-49 199.9 182 59.3
Actinidia17677 Actinidia chinensis HOM05D003740 ORTHO05D004611 4.4e-45 186.4 404 35.9
vmacro09045 Vaccinium macrocarpon HOM05D003740 ORTHO05D004611 4.7e-31 139.8 76 85.5
Cpa.g.c37387 Carica papaya HOM05D003740 ORTHO05D004611 1.2e-29 135.2 132 57.6
MBI05_g15360_MAGBIO Magnolia biondii HOM05D003740 ORTHO05D004611 7.8e-26 122.5 69 85.5
SMO112G0048 Selaginella moellendorffii HOM05D003740 ORTHO05D004611 8.9e-22 109.0 75 69.3
Nitab4.5_0001618g0330 Nicotiana tabacum HOM05D003740 ORTHO05D004611 1.4e-19 101.7 54 81.5
TPR.G13517 Trifolium pratense HOM05D003740 ORTHO05D027079 2.4e-19 100.9 88 56.8
BNapus_Darmor_BZH_scaffold_38p00040 Brassica napus HOM05D003740 ORTHO05D027079 1.8e-14 84.7 118 44.1
BcaC02g11255 Brassica carinata HOM05D003740 ORTHO05D015230 3.1e-14 84.0 74 55.4
TPR.G40499 Trifolium pratense HOM05D003740 ORTHO05D004611 5.2e-14 83.2 60 70.0
BcaC09g48688 Brassica carinata HOM05D003740 ORTHO05D027079 4.4e-13 80.1 84 50.0
Psat6g009800 Pisum sativum HOM05D003740 ORTHO05D004611 6.6e-09 66.2 41 73.2
TPR.G39825 Trifolium pratense HOM05D003740 ORTHO05D411371 1.4e-06 58.5 33 81.8
SGA_v2.0_scaffold69G23132 Striga asiatica HOM05D000011 ORTHO05D000018 2.4e-06 57.8 33 84.8
A03p42520 Brassica napus HOM05D024621 ORTHO05D015230 4.0e-06 57.0 55 54.5
Ah.04g151350 Amaranthus hybridus HOM05D002173 ORTHO05D002189 6.8e-06 56.2 36 69.4
Pp3c1_19750 Physcomitrium patens HOM05D003740 ORTHO05D004611 8.9e-06 55.8 104 37.5


User provided reference genes

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