Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold105G30342 Striga asiatica HOM05D010327 ORTHO05D010465 7.3e-147 523.9 263 100.0
SGA_v2.0_scaffold37G14910 Striga asiatica HOM05D000681 ORTHO05D010465 2.1e-29 133.7 66 93.9
Rhsim04G0108900 Rhododendron simsii HOM05D000002 ORTHO05D000001 2.9e-10 70.1 121 41.3
QL07p005092 Quercus lobata HOM05D010327 ORTHO05D010465 1.1e-09 68.2 130 37.7
VMungo1383G0357 Vigna mungo HOM05D000270 ORTHO05D000163 1.4e-09 67.8 154 35.1
SGA_v2.0_scaffold42G16091 Striga asiatica HOM05D010327 ORTHO05D010465 4.2e-09 66.2 101 42.6
BolC2t09240H Brassica oleracea HOM05D009987 ORTHO05D010465 1.6e-08 64.3 61 57.4
arahy.Tifrunner.gnm1.ann1.VDH4YT Arachis hypogaea HOM05D009987 ORTHO05D010465 4.6e-08 62.8 71 43.7
Rhsim13G0216800 Rhododendron simsii HOM05D010327 ORTHO05D010465 4.6e-08 62.8 63 52.4
HPP92_016272 Vanilla planifolia HOM05D010327 ORTHO05D010465 6.0e-08 62.4 67 47.8
FAN19G0505 Fragaria x ananassa HOM05D010327 ORTHO05D010465 7.9e-08 62.0 68 50.0
MD03G1169600 Malus domestica HOM05D010327 ORTHO05D010465 1.3e-07 61.2 69 49.3
MSTRG.23391 Avicennia marina HOM05D010327 ORTHO05D010465 2.3e-07 60.5 65 52.3
FAN23G1235 Fragaria x ananassa HOM05D010327 ORTHO05D010465 2.3e-07 60.5 68 48.5
CSS0003777 Camellia sinensis var. sinensis HOM05D010327 ORTHO05D010465 3.0e-07 60.1 72 47.2
CSS0025370 Camellia sinensis var. sinensis HOM05D010327 ORTHO05D010465 3.0e-07 60.1 72 47.2
arahy.Tifrunner.gnm1.ann1.X9WA5F Arachis hypogaea HOM05D009987 ORTHO05D010465 3.9e-07 59.7 76 42.1
Migut.J01691 Erythranthe guttata HOM05D000270 ORTHO05D000163 5.1e-07 59.3 48 70.8
QL02p058001 Quercus lobata HOM05D010327 ORTHO05D010465 8.7e-07 58.5 54 55.6
Sopen02g034130 Solanum pennellii HOM05D029448 ORTHO05D030160 1.1e-06 58.2 63 52.4
AUR62008417 Chenopodium quinoa HOM05D024303 ORTHO05D010465 1.5e-06 57.8 52 57.7
Medtr5g078215 Medicago truncatula HOM05D010327 ORTHO05D030160 1.9e-06 57.4 68 44.1
QL93p0100_0410 Quercus lobata HOM05D010327 ORTHO05D010465 3.3e-06 56.6 54 53.7
Sabra17G0073600 Salix brachista HOM05D009987 ORTHO05D010465 5.6e-06 55.8 71 42.3
TAR371G0200 Trochodendron aralioides HOM05D001630 ORTHO05D010465 5.6e-06 55.8 55 56.4
vmacro18191 Vaccinium macrocarpon HOM05D009987 ORTHO05D010465 7.4e-06 55.5 62 48.4


User provided reference genes

Program Settings