Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold105G30292 Striga asiatica HOM05D002974 ORTHO05D002992 2.1e-70 268.9 132 100.0
SGA_v2.0_scaffold105G30310 Striga asiatica HOM05D002974 ORTHO05D002992 8.9e-69 263.5 132 98.5
SGA_v2.0_scaffold69G23150 Striga asiatica HOM05D002974 ORTHO05D002992 9.1e-29 130.6 134 59.0
SalBow6G6653 Salvia bowleyana HOM05D002974 ORTHO05D002992 2.4e-13 79.3 121 43.0
Oeu059346.1 Olea europaea HOM05D002974 ORTHO05D002992 1.9e-10 69.7 152 38.2
Cc06_g19310 Coffea canephora HOM05D002974 ORTHO05D002992 2.5e-10 69.3 135 38.5
PGR031G3974 Punica granatum HOM05D002974 ORTHO05D002992 3.2e-10 68.9 77 48.1
SalBow1G1187 Salvia bowleyana HOM05D064831 ORTHO05D002992 3.2e-10 68.9 111 44.1
SalBow1G0087 Salvia bowleyana HOM05D064831 ORTHO05D002992 5.5e-10 68.2 107 44.9
TWI53G1119 Tripterygium wilfordii HOM05D002974 ORTHO05D002992 1.2e-09 67.0 40 77.5
Potri.006G038900 Populus trichocarpa HOM05D002974 ORTHO05D002992 2.7e-09 65.9 43 72.1
MSTRG.10792 Avicennia marina HOM05D002974 ORTHO05D002992 6.1e-09 64.7 63 57.1
FvH4_6g25410 Fragaria vesca HOM05D002974 ORTHO05D002992 1.8e-08 63.2 57 57.9
FAN05G2143 Fragaria x ananassa HOM05D002974 ORTHO05D002992 1.8e-08 63.2 57 57.9
Potri.016G036600 Populus trichocarpa HOM05D002974 ORTHO05D002992 1.8e-08 63.2 127 39.4
ClCG10G016220 Citrullus lanatus HOM05D002974 ORTHO05D002992 2.3e-08 62.8 46 65.2
Oeu029509.1 Olea europaea HOM05D002974 ORTHO05D002992 2.3e-08 62.8 58 60.3
DCAR_013643 Daucus carota HOM05D002974 ORTHO05D002992 3.0e-08 62.4 48 66.7
Nn2g14777 Nelumbo nucifera HOM05D002974 ORTHO05D002992 3.0e-08 62.4 60 60.0
Gohir.A10G187100 Gossypium hirsutum HOM05D002974 ORTHO05D002992 4.0e-08 62.0 137 35.0
Prupe.7G038200 Prunus persica HOM05D002974 ORTHO05D002992 5.2e-08 61.6 50 64.0
Sabra16G0038800 Salix brachista HOM05D002974 ORTHO05D002992 5.2e-08 61.6 127 37.8
Migut.J01657 Erythranthe guttata HOM05D002974 ORTHO05D002992 6.7e-08 61.2 39 76.9
FAN02G0528 Fragaria x ananassa HOM05D002974 ORTHO05D002992 6.7e-08 61.2 57 56.1
Cfa020005 Carpinus fangiana HOM05D002974 ORTHO05D002992 8.8e-08 60.8 62 48.4
Haze_20227 Corylus avellana HOM05D002974 ORTHO05D002992 8.8e-08 60.8 62 48.4
MELO3C009755.2 Cucumis melo HOM05D002974 ORTHO05D002992 8.8e-08 60.8 46 63.0
MELO3C019076.2 Cucumis melo HOM05D002974 ORTHO05D002992 1.2e-07 60.5 64 50.0
THA.LOC104824399 Tarenaya hassleriana HOM05D002974 ORTHO05D002992 1.2e-07 60.5 135 38.5
CANSAT64G2862 Cannabis sativa HOM05D002974 ORTHO05D002992 1.5e-07 60.1 59 54.2
CsaV3_4G029660 Cucumis sativus L. HOM05D002974 ORTHO05D002992 1.5e-07 60.1 94 39.4
FAN09G2803 Fragaria x ananassa HOM05D002974 ORTHO05D002992 1.5e-07 60.1 57 56.1
Nn7g36749 Nelumbo nucifera HOM05D002974 ORTHO05D002992 1.5e-07 60.1 56 58.9
Nitab4.5_0004588g0030 Nicotiana tabacum HOM05D015198 ORTHO05D002992 1.5e-07 60.1 81 46.9
Lalb_Chr22g0357431 Lupinus albus HOM05D002974 ORTHO05D002992 2.0e-07 59.7 60 50.0
Eucgr.A02242 Eucalyptus grandis HOM05D002974 ORTHO05D002992 2.6e-07 59.3 69 49.3
Lalb_Chr24g0400351 Lupinus albus HOM05D002974 ORTHO05D002992 2.6e-07 59.3 86 43.0
ATR1096G079 Amborella trichopoda HOM05D002974 ORTHO05D002992 3.3e-07 58.9 51 56.9
Manes.09G004900 Manihot esculenta HOM05D002974 ORTHO05D002992 3.3e-07 58.9 55 52.7
ECA248G1904 Erigeron canadensis HOM05D002974 ORTHO05D002992 4.4e-07 58.5 57 54.4
Glyma.19G130400 Glycine max HOM05D002974 ORTHO05D002992 4.4e-07 58.5 75 46.7
Sed0014788 Sechium edule HOM05D002974 ORTHO05D002992 4.4e-07 58.5 133 33.8
TAR623G1017 Trochodendron aralioides HOM05D002974 ORTHO05D002992 4.4e-07 58.5 60 50.0
Atru.chr1.1439 Acer truncatum HOM05D002974 ORTHO05D002992 5.7e-07 58.2 51 58.8
Aqoxy2G00396 Aquilegia oxysepala HOM05D002974 ORTHO05D002992 5.7e-07 58.2 60 55.0
Glyma.03G127800 Glycine max HOM05D002974 ORTHO05D002992 5.7e-07 58.2 60 53.3
Nitab4.5_0000812g0090 Nicotiana tabacum HOM05D015198 ORTHO05D002992 5.7e-07 58.2 138 34.1
Peaxi162Scf00003g00491 Petunia axillaris HOM05D015198 ORTHO05D002992 5.7e-07 58.2 46 65.2
CSS0033077 Camellia sinensis var. sinensis HOM05D002974 ORTHO05D002992 7.5e-07 57.8 58 55.2
TPR.G8953 Trifolium pratense HOM05D002974 ORTHO05D002992 7.5e-07 57.8 48 60.4
MSTRG.26159 Avicennia marina HOM05D002974 ORTHO05D002992 9.7e-07 57.4 49 63.3
Duzib128G1163 Durio zibethinus HOM05D002974 ORTHO05D002992 9.7e-07 57.4 57 54.4
Migut.K00136 Erythranthe guttata HOM05D002974 ORTHO05D002992 9.7e-07 57.4 43 62.8
Lj1g0016303 Lotus japonicus HOM05D002974 ORTHO05D002992 9.7e-07 57.4 60 51.7
MD14G1088500 Malus domestica HOM05D002974 ORTHO05D002992 9.7e-07 57.4 54 57.4
THA.LOC109116532 Tarenaya hassleriana HOM05D002974 ORTHO05D002992 9.7e-07 57.4 55 60.0
Actinidia01827 Actinidia chinensis HOM05D002974 ORTHO05D002992 1.3e-06 57.0 119 40.3
CiPaw.09G047800 Carya illinoinensis HOM05D002974 ORTHO05D002992 1.3e-06 57.0 80 42.5
RcHm_v2.0_Chr2g0125651 Rosa chinensis HOM05D002974 ORTHO05D002992 1.3e-06 57.0 55 54.5
THA.LOC104816020 Tarenaya hassleriana HOM05D002974 ORTHO05D002992 1.3e-06 57.0 134 38.8
THA.LOC104820144 Tarenaya hassleriana HOM05D002974 ORTHO05D002992 1.3e-06 57.0 53 56.6
VMungo1383G0235 Vigna mungo HOM05D002974 ORTHO05D002992 1.3e-06 57.0 69 52.2
ClCG04G004500 Citrullus lanatus HOM05D002974 ORTHO05D002992 1.7e-06 56.6 59 50.8
DCAR_020574 Daucus carota HOM05D015198 ORTHO05D002992 1.7e-06 56.6 66 43.9
Gohir.D10G194600 Gossypium hirsutum HOM05D002974 ORTHO05D002992 2.8e-06 55.8 122 36.1
Gorai.011G217100 Gossypium raimondii HOM05D002974 ORTHO05D002992 2.8e-06 55.8 131 34.4
Lsat_1_v5_gn_5_156980 Lactuca sativa HOM05D002974 ORTHO05D002992 2.8e-06 55.8 77 48.1
PGSC0003DMG400008372 Solanum tuberosum HOM05D015198 ORTHO05D002992 2.8e-06 55.8 57 50.9
TAR633G0725 Trochodendron aralioides HOM05D001496 ORTHO05D007453 2.8e-06 55.8 48 58.3
CSS0001226 Camellia sinensis var. sinensis HOM05D002974 ORTHO05D002992 3.7e-06 55.5 54 53.7
CSS0032574 Camellia sinensis var. sinensis HOM05D002974 ORTHO05D002992 3.7e-06 55.5 54 53.7
QL07p010402 Quercus lobata HOM05D002974 ORTHO05D002992 3.7e-06 55.5 71 43.7
Sed0012008 Sechium edule HOM05D002974 ORTHO05D002992 3.7e-06 55.5 52 57.7
CDE08G1203 Ceratophyllum demersum HOM05D002974 ORTHO05D002992 4.8e-06 55.1 116 34.5
Phvul.001G123400 Phaseolus vulgaris HOM05D002974 ORTHO05D002992 4.8e-06 55.1 69 50.7
PGR031G0048 Punica granatum HOM05D002974 ORTHO05D002992 4.8e-06 55.1 54 55.6
COL.COLO4_20695 Corchorus olitorius HOM05D003550 ORTHO05D004336 6.3e-06 54.7 53 58.5
Duzib106G0159 Durio zibethinus HOM05D002974 ORTHO05D002992 6.3e-06 54.7 51 51.0
Solyc10g078440.2 Solanum lycopersicum HOM05D015198 ORTHO05D002992 6.3e-06 54.7 49 55.1
Zm00001eb369260 Zea mays HOM05D002974 ORTHO05D002992 6.3e-06 54.7 71 45.1
CiPaw.10G040200 Carya illinoinensis HOM05D002974 ORTHO05D002992 8.2e-06 54.3 71 49.3
CiPaw.13G015100 Carya illinoinensis HOM05D002974 ORTHO05D002992 8.2e-06 54.3 46 65.2
FAN10G2850 Fragaria x ananassa HOM05D002974 ORTHO05D002992 8.2e-06 54.3 47 63.8
Os01g0808900 Oryza sativa ssp. japonica HOM05D002974 ORTHO05D002992 8.2e-06 54.3 40 62.5
PSO384G2085 Papaver somniferum HOM05D002974 ORTHO05D002992 8.2e-06 54.3 57 52.6
unitig_748.g7224 Utricularia gibba HOM05D002974 ORTHO05D002992 8.2e-06 54.3 66 50.0


User provided reference genes

Program Settings