Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold1056G53815 Striga asiatica HOM05D029933 ORTHO05D037770 2.8e-82 308.5 151 100.0
SGA_v2.0_scaffold139G35366 Striga asiatica HOM05D029933 ORTHO05D037770 3.2e-38 162.2 142 64.1
SGA_v2.0_scaffold81G26092 Striga asiatica HOM05D005578 ORTHO05D006969 1.8e-33 146.4 75 92.0
SGA_v2.0_scaffold62G21482 Striga asiatica HOM05D029933 ORTHO05D037770 1.4e-28 130.2 133 56.4
SGA_v2.0_scaffold80G25690 Striga asiatica HOM05D029933 ORTHO05D000002 2.9e-23 112.5 106 54.7
SGA_v2.0_scaffold8G04348 Striga asiatica HOM05D000984 ORTHO05D001096 6.3e-18 94.7 109 47.7
SGA_v2.0_scaffold59G20758 Striga asiatica HOM05D000004 ORTHO05D000002 2.1e-13 79.7 58 62.1
Manes.03G212950 Manihot esculenta HOM05D003122 ORTHO05D000002 6.1e-13 78.2 85 45.9
Psat4g144760 Pisum sativum HOM05D000045 ORTHO05D001346 6.7e-12 74.7 126 33.3
VMungo1080G1902 Vigna mungo HOM05D000054 ORTHO05D010195 2.2e-10 69.7 81 42.0
Psat4g099280 Pisum sativum HOM05D003122 ORTHO05D000002 2.8e-10 69.3 115 33.0
HanXRQChr06g0175231 Helianthus annuus HOM05D000004 ORTHO05D000002 2.4e-09 66.2 144 32.6
Ca_05816_v3 Cicer arietinum L. HOM05D003122 ORTHO05D000002 4.1e-09 65.5 133 29.3
Psat1g080840 Pisum sativum HOM05D003122 ORTHO05D000002 7.0e-09 64.7 115 32.2
Lalb_Chr12g0204601 Lupinus albus HOM05D003122 ORTHO05D000002 9.1e-09 64.3 121 30.6
Ca_12972_v3 Cicer arietinum L. HOM05D003122 ORTHO05D010195 2.0e-08 63.2 83 36.1
VMungo1383G2683 Vigna mungo HOM05D003122 ORTHO05D000002 2.0e-08 63.2 145 27.6
Psat5g012320 Pisum sativum HOM05D003122 ORTHO05D011729 2.7e-08 62.8 124 30.6
Ca_07114_v3 Cicer arietinum L. HOM05D003122 ORTHO05D000002 4.5e-08 62.0 131 30.5
Ca_18548_v3 Cicer arietinum L. HOM05D003122 ORTHO05D010195 4.5e-08 62.0 96 36.5
Ca_07113_v3 Cicer arietinum L. HOM05D003122 ORTHO05D000002 5.9e-08 61.6 85 34.1
TPR.G20516 Trifolium pratense HOM05D003122 ORTHO05D000002 5.9e-08 61.6 87 39.1
VMungo0464G0875 Vigna mungo HOM05D003387 ORTHO05D005400 5.9e-08 61.6 81 40.7
VMungo1127G0254 Vigna mungo HOM05D002312 ORTHO05D007981 5.9e-08 61.6 72 38.9
Ca_14630_v3 Cicer arietinum L. HOM05D003122 ORTHO05D000002 1.0e-07 60.8 86 39.5
Ca_23687_v3 Cicer arietinum L. HOM05D003122 ORTHO05D000002 1.0e-07 60.8 82 35.4
Psat6g240160 Pisum sativum HOM05D003122 ORTHO05D000002 1.0e-07 60.8 115 29.6
Psat0s3343g0120 Pisum sativum HOM05D003122 ORTHO05D000002 1.7e-07 60.1 114 34.2
VMungo1080G0040 Vigna mungo HOM05D003438 ORTHO05D000002 2.9e-07 59.3 81 34.6
ECA240G3730 Erigeron canadensis HOM05D000004 ORTHO05D000002 3.8e-07 58.9 84 35.7
ECA248G3468 Erigeron canadensis HOM05D000004 ORTHO05D000002 3.8e-07 58.9 100 30.0
Psat0s2458g0120 Pisum sativum HOM05D003122 ORTHO05D000002 5.0e-07 58.5 89 36.0
Psat1g019880 Pisum sativum HOM05D000001 ORTHO05D000003 5.0e-07 58.5 83 32.5
Psat5g016360 Pisum sativum HOM05D000004 ORTHO05D000002 5.0e-07 58.5 127 26.0
Psat0s2594g0080 Pisum sativum HOM05D003122 ORTHO05D011729 6.5e-07 58.2 122 29.5
VMungo1127G0075 Vigna mungo HOM05D006055 ORTHO05D007480 6.5e-07 58.2 69 43.5
Psat4g104800 Pisum sativum HOM05D003122 ORTHO05D000002 8.5e-07 57.8 114 33.3
TWI81G0970 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 1.1e-06 57.4 121 31.4
Ca_01724_v3 Cicer arietinum L. HOM05D003122 ORTHO05D000002 1.5e-06 57.0 85 32.9
Psat7g141960 Pisum sativum HOM05D003122 ORTHO05D000002 1.5e-06 57.0 97 32.0
VMungo0251G3700 Vigna mungo HOM05D003122 ORTHO05D000002 1.9e-06 56.6 83 34.9
TWI09G0741 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 4.2e-06 55.5 88 36.4
VMungo0331G1419 Vigna mungo HOM05D031971 ORTHO05D010195 4.2e-06 55.5 62 40.3
Ca_13622_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 5.5e-06 55.1 82 34.1
Ca_15979_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 5.5e-06 55.1 81 33.3
VMungo0540G1068 Vigna mungo HOM05D003122 ORTHO05D010195 5.5e-06 55.1 69 36.2
VMungo0720G0631 Vigna mungo HOM05D003122 ORTHO05D000002 5.5e-06 55.1 81 35.8
Psat7g263080 Pisum sativum HOM05D003122 ORTHO05D000002 7.2e-06 54.7 88 36.4
Psat6g155840 Pisum sativum HOM05D003122 ORTHO05D000002 9.4e-06 54.3 126 31.7


User provided reference genes

Program Settings