Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold104G30265 Striga asiatica HOM05D006904 ORTHO05D008439 7.4e-176 620.5 337 100.0
MSTRG.24864 Avicennia marina HOM05D006904 ORTHO05D008439 8.3e-95 351.3 321 63.6
Migut.A01096 Erythranthe guttata HOM05D006904 ORTHO05D008439 3.1e-81 306.2 324 60.8
Nitab4.5_0004251g0070 Nicotiana tabacum HOM05D006904 ORTHO05D008439 2.0e-80 303.5 326 55.5
PGSC0003DMG400012243 Solanum tuberosum HOM05D006904 ORTHO05D008439 9.9e-80 301.2 256 64.8
CAN.G567.78 Capsicum annuum HOM05D006904 ORTHO05D008439 1.7e-79 300.4 315 57.5
Sopen08g031220 Solanum pennellii HOM05D006904 ORTHO05D008439 1.7e-79 300.4 306 57.5
Solyc08g083010.3 Solanum lycopersicum HOM05D006904 ORTHO05D008439 3.8e-79 299.3 315 58.4
Cfa011933 Carpinus fangiana HOM05D006904 ORTHO05D008439 1.6e-77 293.9 326 54.3
Potri.001G084500 Populus trichocarpa HOM05D006904 ORTHO05D008439 4.6e-77 292.4 264 60.6
COL.COLO4_10787 Corchorus olitorius HOM05D006904 ORTHO05D008439 3.3e-75 286.2 269 59.5
Haze_09157 Corylus avellana HOM05D006904 ORTHO05D008439 9.6e-75 284.6 325 53.2
Aqoxy5G04256 Aquilegia oxysepala HOM05D006904 ORTHO05D008439 1.6e-74 283.9 264 59.8
Haze_09163 Corylus avellana HOM05D006904 ORTHO05D008439 6.2e-74 282.0 331 52.6
Dinv02287 Davidia involucrata HOM05D006904 ORTHO05D008439 1.1e-73 281.2 332 56.0
HanXRQChr07g0192161 Helianthus annuus HOM05D006904 ORTHO05D008439 1.8e-73 280.4 328 53.7
Oeu010740.1 Olea europaea HOM05D006904 ORTHO05D008439 3.1e-73 279.6 241 66.0
Gohir.D12G240700 Gossypium hirsutum HOM05D006904 ORTHO05D008439 4.0e-73 279.3 317 53.6
Gorai.008G257800 Gossypium raimondii HOM05D006904 ORTHO05D008439 4.0e-73 279.3 317 53.6
Hma1.2p1_0456F.1_g156570 Hydrangea macrophylla HOM05D006904 ORTHO05D008439 4.0e-73 279.3 241 65.1
Rhsim02G0251400 Rhododendron simsii HOM05D006904 ORTHO05D008439 4.0e-73 279.3 250 62.0
Ciclev10021179m.g Citrus clementina HOM05D006904 ORTHO05D008439 1.2e-72 277.7 330 50.6
Nitab4.5_0007063g0060 Nicotiana tabacum HOM05D006904 ORTHO05D008439 1.5e-72 277.3 335 51.9
ECA233G3570 Erigeron canadensis HOM05D006904 ORTHO05D008439 2.0e-72 276.9 248 62.1
Gohir.A12G239500 Gossypium hirsutum HOM05D006904 ORTHO05D008439 3.4e-72 276.2 317 53.3
Thecc.03G222200 Theobroma cacao HOM05D006904 ORTHO05D008439 5.8e-72 275.4 317 53.9
vmacro11509 Vaccinium macrocarpon HOM05D006904 ORTHO05D008439 1.3e-71 274.2 253 59.7
Sc01g0010610 Simmondsia chinensis HOM05D006904 ORTHO05D008439 6.4e-71 271.9 267 62.5
CSS0028351 Camellia sinensis var. sinensis HOM05D006904 ORTHO05D008439 1.4e-70 270.8 270 58.9
Actinidia04169 Actinidia chinensis HOM05D006904 ORTHO05D008439 3.2e-70 269.6 331 53.5
TAR629G0561 Trochodendron aralioides HOM05D006904 ORTHO05D008439 1.2e-69 267.7 325 54.2
TWI81G0826 Tripterygium wilfordii HOM05D006904 ORTHO05D008439 2.1e-69 266.9 304 51.6
QL02p029228 Quercus lobata HOM05D006904 ORTHO05D008439 2.7e-69 266.5 325 52.3
MD14G1125000 Malus domestica HOM05D006904 ORTHO05D008439 4.6e-69 265.8 327 50.8
MD06G1117600 Malus domestica HOM05D006904 ORTHO05D008439 7.9e-69 265.0 331 49.5
THA.LOC104813055 Tarenaya hassleriana HOM05D006904 ORTHO05D008439 1.0e-68 264.6 276 54.7
Lj8A201G80 Lonicera japonica HOM05D006904 ORTHO05D008439 2.3e-68 263.5 244 59.8
RcHm_v2.0_Chr7g0186801 Rosa chinensis HOM05D006904 ORTHO05D008439 2.3e-68 263.5 262 57.6
MBI04_g44912_MAGBIO Magnolia biondii HOM05D006904 ORTHO05D008439 3.0e-68 263.1 318 52.2
EL10Ac5g12440 Beta vulgaris HOM05D006904 ORTHO05D008439 5.1e-68 262.3 292 51.4
Atru.chr9.1900 Acer truncatum HOM05D006904 ORTHO05D008439 6.6e-68 261.9 240 61.7
Eucgr.E01035 Eucalyptus grandis HOM05D006904 ORTHO05D008439 7.4e-67 258.5 256 60.9
Ah.12g053150 Amaranthus hybridus HOM05D006904 ORTHO05D008439 2.8e-66 256.5 282 55.3
Carub.0007s1701 Capsella rubella HOM05D006904 ORTHO05D008439 4.8e-66 255.8 251 57.4
Sabra01G0061300 Salix brachista HOM05D006904 ORTHO05D008439 4.8e-66 255.8 307 49.5
Prupe.5G128700 Prunus persica HOM05D006904 ORTHO05D008439 8.1e-66 255.0 333 50.5
arahy.Tifrunner.gnm1.ann1.U3Q9D7 Arachis hypogaea HOM05D006904 ORTHO05D008439 4.0e-65 252.7 262 56.1
AT4G24090 Arabidopsis thaliana HOM05D006904 ORTHO05D008439 5.3e-65 252.3 279 53.0
Thhalv10025762m.g Eutrema salsugineum HOM05D006904 ORTHO05D008439 5.3e-65 252.3 256 56.2
MBI04_g21743_MAGBIO Magnolia biondii HOM05D006904 ORTHO05D008439 1.2e-64 251.1 238 59.2
Peaxi162Scf00074g00356 Petunia axillaris HOM05D006904 ORTHO05D008439 4.5e-64 249.2 287 51.9
Lsat_1_v5_gn_6_9180 Lactuca sativa HOM05D000482 ORTHO05D000349 5.8e-64 248.8 291 55.0
FAN04G1837 Fragaria x ananassa HOM05D006904 ORTHO05D008439 7.6e-64 248.4 324 50.0
PSO675G2501 Papaver somniferum HOM05D006904 ORTHO05D008439 7.6e-64 248.4 280 52.5
GSVIVG01019640001 Vitis vinifera HOM05D006904 ORTHO05D008439 7.6e-64 248.4 324 51.5
BcaNung01113 Brassica carinata HOM05D006904 ORTHO05D008439 1.7e-63 247.3 263 54.0
A01p15360 Brassica napus HOM05D000458 ORTHO05D000951 1.7e-63 247.3 277 52.0
BraA01t01480Z Brassica rapa HOM05D006904 ORTHO05D008439 2.2e-63 246.9 251 55.4
PSO541G0496 Papaver somniferum HOM05D006904 ORTHO05D008439 2.9e-63 246.5 264 55.7
AL7G29200 Arabidopsis lyrata HOM05D006904 ORTHO05D008439 3.8e-63 246.1 279 52.3
BcaC09g50912 Brassica carinata HOM05D006904 ORTHO05D008439 6.4e-63 245.4 277 51.6
C01p19310 Brassica napus HOM05D000458 ORTHO05D000951 6.4e-63 245.4 277 51.6
BolC1t01857H Brassica oleracea HOM05D000458 ORTHO05D000951 6.4e-63 245.4 277 51.6
Hund11354 Selenicereus undatus HOM05D006904 ORTHO05D008439 1.1e-62 244.6 250 57.2
Aa31LG6G7300 Aethionema arabicum HOM05D006904 ORTHO05D008439 5.5e-62 242.3 309 48.9
Glyma.09G286200 Glycine max HOM05D006904 ORTHO05D008439 7.1e-62 241.9 267 53.9
FAN18G2239 Fragaria x ananassa HOM05D006904 ORTHO05D008439 1.6e-61 240.7 324 49.7
arahy.Tifrunner.gnm1.ann1.NJ37M5 Arachis hypogaea HOM05D006904 ORTHO05D008439 2.1e-61 240.4 278 52.9
FvH4_5g11010 Fragaria vesca HOM05D006904 ORTHO05D008439 2.1e-61 240.4 324 49.4
Cc08_g16680 Coffea canephora HOM05D006904 ORTHO05D008439 2.7e-61 240.0 264 56.1
FAN13G1638 Fragaria x ananassa HOM05D006904 ORTHO05D008439 2.7e-61 240.0 324 48.8
Lj2g0027548 Lotus japonicus HOM05D006904 ORTHO05D008439 2.3e-60 236.9 271 50.2
Sp7g22050 Schrenkiella parvula HOM05D006904 ORTHO05D008439 2.3e-60 236.9 254 53.5
SalBow8G2695 Salvia bowleyana HOM05D006904 ORTHO05D008439 5.1e-60 235.7 332 51.8
CiPaw.12G078200 Carya illinoinensis HOM05D006904 ORTHO05D008439 1.1e-59 234.6 319 49.2
AUR62007044 Chenopodium quinoa HOM05D006904 ORTHO05D008439 1.1e-59 234.6 308 48.1
Ca_13963_v3 Cicer arietinum L. HOM05D006904 ORTHO05D008439 3.3e-59 233.0 247 53.8
CDE09G0165 Ceratophyllum demersum HOM05D006904 ORTHO05D008439 4.3e-59 232.6 260 53.1
ClCG10G000840 Citrullus lanatus HOM05D006904 ORTHO05D008439 7.4e-59 231.9 321 47.7
Sed0025618 Sechium edule HOM05D006904 ORTHO05D008439 3.7e-58 229.6 213 62.0
CDE11G0025 Ceratophyllum demersum HOM05D006904 ORTHO05D008439 1.8e-57 227.3 251 53.8
Psat1g000400 Pisum sativum HOM05D006904 ORTHO05D008439 3.1e-57 226.5 255 49.4
Duzib205G0314 Durio zibethinus HOM05D006904 ORTHO05D008439 6.9e-57 225.3 339 45.4
Phvul.002G333700 Phaseolus vulgaris HOM05D006904 ORTHO05D008439 1.2e-56 224.6 297 47.1
Haze_16434 Corylus avellana HOM05D006904 ORTHO05D008439 2.6e-56 223.4 256 53.5
TPR.G25509 Trifolium pratense HOM05D006904 ORTHO05D008439 2.2e-55 220.3 316 44.0
Medtr3g005290 Medicago truncatula HOM05D006904 ORTHO05D008439 6.5e-55 218.8 268 48.9
CANSAT21G0222 Cannabis sativa HOM05D006904 ORTHO05D008439 5.5e-54 215.7 315 49.2
VMungo1309G0432 Vigna mungo HOM05D006904 ORTHO05D008439 7.1e-54 215.3 297 45.8
DCAR_006536 Daucus carota HOM05D006904 ORTHO05D008439 1.2e-53 214.5 240 54.6
PGR042G3610 Punica granatum HOM05D006904 ORTHO05D008439 2.7e-53 213.4 311 48.9
unitig_88.g27646 Utricularia gibba HOM05D006904 ORTHO05D008439 3.5e-53 213.0 252 54.0
ATR0620G017 Amborella trichopoda HOM05D006904 ORTHO05D008439 1.6e-50 204.1 262 46.6
Haze_14079 Corylus avellana HOM05D006904 ORTHO05D008439 1.6e-50 204.1 213 54.0
CsaV3_3G000910 Cucumis sativus L. HOM05D006904 ORTHO05D008439 2.6e-48 196.8 320 45.3
MELO3C013778.2 Cucumis melo HOM05D006904 ORTHO05D008439 3.4e-48 196.4 320 45.3
Manes.02G003600 Manihot esculenta HOM05D006904 ORTHO05D008439 8.4e-47 191.8 249 51.8
AUR62019908 Chenopodium quinoa HOM05D006904 ORTHO05D008439 3.9e-44 183.0 262 45.8
HPP92_025869 Vanilla planifolia HOM05D006904 ORTHO05D008439 1.8e-41 174.1 262 48.1
CARHR231490 Cardamine hirsuta HOM05D006904 ORTHO05D008439 3.8e-39 166.4 176 53.4
ECA246G4131 Erigeron canadensis HOM05D006904 ORTHO05D008439 1.5e-35 154.5 203 43.8
Lsat_1_v5_gn_3_13720 Lactuca sativa HOM05D006904 ORTHO05D008439 1.5e-35 154.5 223 45.7
Aqoxy5G04252 Aquilegia oxysepala HOM05D006904 ORTHO05D008439 2.8e-34 150.2 153 56.9
Cpa.g.sc175.18 Carica papaya HOM05D006904 ORTHO05D008439 1.8e-33 147.5 160 54.4
SEGI_29366 Sequoiadendron giganteum HOM05D006904 ORTHO05D008439 2.9e-31 140.2 217 41.0
Zm00001eb319140 Zea mays HOM05D006904 ORTHO05D008439 2.9e-31 140.2 241 41.9
Os09g0529350 Oryza sativa ssp. japonica HOM05D006904 ORTHO05D008439 1.1e-30 138.3 178 43.8
HanXRQChr06g0166841 Helianthus annuus HOM05D006904 ORTHO05D008439 2.0e-27 127.5 212 41.0
Nn5g30646 Nelumbo nucifera HOM05D006904 ORTHO05D008439 7.4e-27 125.6 116 59.5
Pp3c9_20020 Physcomitrium patens HOM05D006904 ORTHO05D008439 1.2e-24 118.2 246 37.8
AagrBONN_evm.TU.Sc2ySwM_228.3172 Anthoceros agrestis HOM05D006904 ORTHO05D008439 5.3e-17 92.8 328 29.9
SMO361G0353 Selaginella moellendorffii HOM05D006904 ORTHO05D008439 9.1e-17 92.0 136 43.4
BcaC09g50913 Brassica carinata HOM05D006904 ORTHO05D008439 1.6e-16 91.3 104 51.0
QL02p029244 Quercus lobata HOM05D006904 ORTHO05D008439 3.8e-15 86.7 136 40.4
MCO05G331 Micromonas commoda HOM05D006904 ORTHO05D008439 3.2e-14 83.6 255 32.2
Mapoly0033s0090 Marchantia polymorpha HOM05D006904 ORTHO05D008439 4.7e-13 79.7 343 28.0
CBR_g70738 Chara braunii HOM05D006904 ORTHO05D008439 1.4e-12 78.2 238 31.1
Aa31LG6G7320 Aethionema arabicum HOM05D003846 ORTHO05D004726 8.3e-10 68.9 154 39.6
Cre02.g144850 Chlamydomonas reinhardtii HOM05D006904 ORTHO05D008439 3.5e-08 63.5 162 36.4


User provided reference genes

Program Settings