Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold104G30259 Striga asiatica HOM05D004525 ORTHO05D005295 9.6e-69 263.5 142 100.0
SGA_v2.0_scaffold14G07039 Striga asiatica HOM05D004525 ORTHO05D005295 4.4e-21 105.1 172 48.3
SGA_v2.0_scaffold36G14274 Striga asiatica HOM05D004525 ORTHO05D005295 4.4e-21 105.1 172 48.3
MSTRG.24865 Avicennia marina HOM05D004525 ORTHO05D005295 5.0e-17 91.7 179 41.9
Migut.E00628 Erythranthe guttata HOM05D004525 ORTHO05D005295 1.5e-16 90.1 196 39.3
Peaxi162Scf01444g00013 Petunia axillaris HOM05D004525 ORTHO05D005295 1.2e-15 87.0 141 47.5
Nitab4.5_0001367g0040 Nicotiana tabacum HOM05D004525 ORTHO05D005295 1.6e-15 86.7 172 41.9
SalBow6G4763 Salvia bowleyana HOM05D004525 ORTHO05D005295 4.7e-15 85.1 154 43.5
Prupe.2G307200 Prunus persica HOM05D004525 ORTHO05D005295 6.1e-15 84.7 173 40.5
Thecc.03G220900 Theobroma cacao HOM05D004525 ORTHO05D005295 6.1e-15 84.7 176 40.9
Duzib068G1021 Durio zibethinus HOM05D004525 ORTHO05D005295 8.0e-15 84.3 180 40.0
Lsat_1_v5_gn_3_14420 Lactuca sativa HOM05D004525 ORTHO05D005295 8.0e-15 84.3 178 40.4
Sabra01G0060700 Salix brachista HOM05D004525 ORTHO05D005295 8.0e-15 84.3 173 41.6
Nitab4.5_0012632g0010 Nicotiana tabacum HOM05D004525 ORTHO05D005295 2.3e-14 82.8 172 41.3
unitig_744.g24303 Utricularia gibba HOM05D004525 ORTHO05D005295 3.0e-14 82.4 172 40.7
Haze_09177 Corylus avellana HOM05D004525 ORTHO05D005295 4.0e-14 82.0 176 40.9
THA.LOC104809303 Tarenaya hassleriana HOM05D004525 ORTHO05D005295 5.2e-14 81.6 176 39.2
MSTRG.12201 Avicennia marina HOM05D004525 ORTHO05D005295 6.8e-14 81.3 175 41.7
Cpa.g.sc27.182 Carica papaya HOM05D004525 ORTHO05D005295 6.8e-14 81.3 180 38.9
COL.COLO4_10799 Corchorus olitorius HOM05D004525 ORTHO05D005295 6.8e-14 81.3 180 39.4
Manes.09G101000 Manihot esculenta HOM05D004525 ORTHO05D005295 6.8e-14 81.3 177 40.7
CiPaw.12G077100 Carya illinoinensis HOM05D004525 ORTHO05D005295 8.9e-14 80.9 176 39.2
Duzib205G1187 Durio zibethinus HOM05D004525 ORTHO05D005295 8.9e-14 80.9 168 39.9
MD14G1136300 Malus domestica HOM05D004525 ORTHO05D005295 8.9e-14 80.9 176 39.2
Cfa011920 Carpinus fangiana HOM05D004525 ORTHO05D005295 1.2e-13 80.5 180 40.0
Gorai.008G258800 Gossypium raimondii HOM05D004525 ORTHO05D005295 1.2e-13 80.5 176 39.2
QL12p036922 Quercus lobata HOM05D004525 ORTHO05D005295 1.2e-13 80.5 180 38.3
Gohir.A12G240200 Gossypium hirsutum HOM05D004525 ORTHO05D005295 1.5e-13 80.1 180 38.9
HanXRQChr17g0534221 Helianthus annuus HOM05D004525 ORTHO05D005295 1.5e-13 80.1 176 39.8
MD06G1119500 Malus domestica HOM05D004525 ORTHO05D005295 1.5e-13 80.1 175 40.0
GSVIVG01019654001 Vitis vinifera HOM05D004525 ORTHO05D005295 2.0e-13 79.7 180 39.4
QL02p027997 Quercus lobata HOM05D004525 ORTHO05D005295 2.6e-13 79.3 180 37.8
Gohir.D12G241500 Gossypium hirsutum HOM05D004525 ORTHO05D005295 3.4e-13 79.0 176 38.6
Potri.001G083801 Populus trichocarpa HOM05D004525 ORTHO05D005295 7.5e-13 77.8 173 41.0
Dinv38179 Davidia involucrata HOM05D004525 ORTHO05D005295 1.3e-12 77.0 137 43.1
Psat7g073280 Pisum sativum HOM05D004525 ORTHO05D005295 1.3e-12 77.0 181 36.5
Prupe.5G130000 Prunus persica HOM05D004525 ORTHO05D005295 1.3e-12 77.0 178 38.2
Cc08_g16770 Coffea canephora HOM05D004525 ORTHO05D005295 2.2e-12 76.3 135 42.2
Solyc08g065160.3 Solanum lycopersicum HOM05D004525 ORTHO05D005295 2.8e-12 75.9 176 40.9
Sopen08g018760 Solanum pennellii HOM05D004525 ORTHO05D005295 2.8e-12 75.9 176 40.9
TPR.G11962 Trifolium pratense HOM05D004525 ORTHO05D005295 2.8e-12 75.9 167 37.7
Cfa006748 Carpinus fangiana HOM05D004525 ORTHO05D005295 4.9e-12 75.1 180 37.8
Sabra03G0106900 Salix brachista HOM05D004525 ORTHO05D005295 4.9e-12 75.1 175 38.9
CiPaw.11G112000 Carya illinoinensis HOM05D004525 ORTHO05D005295 8.3e-12 74.3 176 38.6
Haze_04010 Corylus avellana HOM05D004525 ORTHO05D005295 8.3e-12 74.3 180 37.8
PGSC0003DMG400029951 Solanum tuberosum HOM05D004525 ORTHO05D005295 8.3e-12 74.3 176 40.3
TPR.G15828 Trifolium pratense HOM05D004525 ORTHO05D005295 8.3e-12 74.3 167 37.1
Potri.003G146900 Populus trichocarpa HOM05D004525 ORTHO05D005295 1.1e-11 73.9 173 39.3
Sed0024458 Sechium edule HOM05D004525 ORTHO05D005295 1.1e-11 73.9 172 38.4
unitig_21.g20890 Utricularia gibba HOM05D004525 ORTHO05D005295 1.1e-11 73.9 172 38.4
Atru.chr9.1879 Acer truncatum HOM05D004525 ORTHO05D005295 1.8e-11 73.2 177 37.3
Glyma.08G296500 Glycine max HOM05D004525 ORTHO05D005295 3.1e-11 72.4 177 37.9
Ciclev10022441m.g Citrus clementina HOM05D004525 ORTHO05D005295 4.1e-11 72.0 161 38.5
Oeu022035.1 Olea europaea HOM05D004525 ORTHO05D005295 4.1e-11 72.0 201 34.8
Nn3g18812 Nelumbo nucifera HOM05D004525 ORTHO05D005295 7.0e-11 71.2 136 41.2
ClCG10G000810 Citrullus lanatus HOM05D004525 ORTHO05D005295 9.2e-11 70.9 137 41.6
TWI36G0523 Tripterygium wilfordii HOM05D004525 ORTHO05D005295 9.2e-11 70.9 160 38.1
FvH4_4g11450 Fragaria vesca HOM05D004525 ORTHO05D005295 1.2e-10 70.5 176 35.2
FAN07G0034 Fragaria x ananassa HOM05D004525 ORTHO05D005295 1.2e-10 70.5 176 35.2
vmacro13851 Vaccinium macrocarpon HOM05D004525 ORTHO05D005295 1.2e-10 70.5 180 35.0
VMungo0251G0643 Vigna mungo HOM05D004525 ORTHO05D005295 1.2e-10 70.5 177 36.7
ECA246G3328 Erigeron canadensis HOM05D004525 ORTHO05D005295 1.6e-10 70.1 132 40.9
FAN22G0758 Fragaria x ananassa HOM05D004525 ORTHO05D005295 1.6e-10 70.1 172 34.3
BolC7t42467H Brassica oleracea HOM05D001252 ORTHO05D001661 2.0e-10 69.7 184 35.9
RcHm_v2.0_Chr1g0332661 Rosa chinensis HOM05D004525 ORTHO05D005295 2.0e-10 69.7 176 35.8
arahy.Tifrunner.gnm1.ann1.0LH6ZS Arachis hypogaea HOM05D004525 ORTHO05D005295 2.7e-10 69.3 157 40.1
arahy.Tifrunner.gnm1.ann1.DJD4V2 Arachis hypogaea HOM05D004525 ORTHO05D005295 2.7e-10 69.3 157 40.1
TWI56G0194 Tripterygium wilfordii HOM05D004525 ORTHO05D005295 2.7e-10 69.3 172 37.2
Atru.chr3.1913 Acer truncatum HOM05D004525 ORTHO05D005295 3.5e-10 68.9 177 37.9
Ca_02991_v3 Cicer arietinum L. HOM05D004525 ORTHO05D005295 3.5e-10 68.9 172 37.2
CsaV3_3G000870 Cucumis sativus L. HOM05D004525 ORTHO05D005295 4.5e-10 68.6 136 41.2
Hma1.2p1_0456F.1_g156630 Hydrangea macrophylla HOM05D004525 ORTHO05D005295 4.5e-10 68.6 133 40.6
vmacro11499 Vaccinium macrocarpon HOM05D004525 ORTHO05D005295 4.5e-10 68.6 142 37.3
Thhalv10008848m.g Eutrema salsugineum HOM05D004525 ORTHO05D005295 5.9e-10 68.2 174 35.6
Glyma.18G125700 Glycine max HOM05D004525 ORTHO05D005295 5.9e-10 68.2 172 37.8
TAR629G2664 Trochodendron aralioides HOM05D004525 ORTHO05D005295 5.9e-10 68.2 179 38.0
Actinidia22207 Actinidia chinensis HOM05D004525 ORTHO05D005295 7.8e-10 67.8 172 35.5
BraA07t29074Z Brassica rapa HOM05D001252 ORTHO05D005295 7.8e-10 67.8 168 35.7
Ca_17957_v3 Cicer arietinum L. HOM05D004525 ORTHO05D005295 7.8e-10 67.8 172 36.6
MBI04_g25309_MAGBIO Magnolia biondii HOM05D004525 ORTHO05D005295 7.8e-10 67.8 180 35.6
RcHm_v2.0_Chr6g0273561 Rosa chinensis HOM05D004525 ORTHO05D005295 7.8e-10 67.8 172 34.3
CSS0036474 Camellia sinensis var. sinensis HOM05D004525 ORTHO05D005295 1.0e-09 67.4 134 39.6
CSS0049671 Camellia sinensis var. sinensis HOM05D004525 ORTHO05D005295 1.0e-09 67.4 134 39.6
Medtr8g085570 Medicago truncatula HOM05D004525 ORTHO05D005295 1.0e-09 67.4 172 36.6
Aa31LG9G260 Aethionema arabicum HOM05D004525 ORTHO05D005295 1.3e-09 67.0 181 38.1
Zm00001eb103320 Zea mays HOM05D004525 ORTHO05D005295 1.3e-09 67.0 134 40.3
Zm00001eb319380 Zea mays HOM05D004525 ORTHO05D005295 1.3e-09 67.0 134 40.3
BcaC06g35131 Brassica carinata HOM05D004525 ORTHO05D005295 2.3e-09 66.2 177 36.7
A07p13030 Brassica napus HOM05D001252 ORTHO05D005295 2.3e-09 66.2 170 36.5
C07p19480 Brassica napus HOM05D001252 ORTHO05D005295 2.3e-09 66.2 177 36.7
DCAR_006547 Daucus carota HOM05D004525 ORTHO05D005295 2.9e-09 65.9 130 37.7
PGR031G2275 Punica granatum HOM05D004525 ORTHO05D005295 2.9e-09 65.9 177 36.7
Rhsim07G0078000 Rhododendron simsii HOM05D004525 ORTHO05D005295 2.9e-09 65.9 181 35.4
AL1G39060 Arabidopsis lyrata HOM05D004525 ORTHO05D005295 3.8e-09 65.5 176 34.1
AT1G26665 Arabidopsis thaliana HOM05D004525 ORTHO05D005295 3.8e-09 65.5 174 34.5
CSS0029651 Camellia sinensis var. sinensis HOM05D004525 ORTHO05D005295 3.8e-09 65.5 176 35.2
CANSAT56G2042 Cannabis sativa HOM05D004525 ORTHO05D005295 3.8e-09 65.5 172 34.3
FAN08G2166 Fragaria x ananassa HOM05D000319 ORTHO05D035382 5.0e-09 65.1 131 36.6
Lalb_Chr12g0205381 Lupinus albus HOM05D004525 ORTHO05D005295 5.0e-09 65.1 172 36.0
Lj4g0019040 Lotus japonicus HOM05D004525 ORTHO05D005295 6.6e-09 64.7 177 36.7
Sp1g22150 Schrenkiella parvula HOM05D004525 ORTHO05D005295 6.6e-09 64.7 174 33.3
DCAR_011870 Daucus carota HOM05D004525 ORTHO05D005295 8.6e-09 64.3 172 33.7
Actinidia27285 Actinidia chinensis HOM05D004525 ORTHO05D005295 1.1e-08 63.9 143 37.8
EL10Ac5g12425 Beta vulgaris HOM05D004525 ORTHO05D005295 1.1e-08 63.9 173 37.0
CARHR212640 Cardamine hirsuta HOM05D004525 ORTHO05D005295 1.1e-08 63.9 174 35.6
MELO3C013773.2 Cucumis melo HOM05D004525 ORTHO05D005295 1.5e-08 63.5 125 39.2
Hund11348 Selenicereus undatus HOM05D004525 ORTHO05D005295 1.5e-08 63.5 132 39.4
BcaB03g14082 Brassica carinata HOM05D004525 ORTHO05D005295 1.9e-08 63.2 171 33.9
Eucgr.C04229 Eucalyptus grandis HOM05D004525 ORTHO05D005295 1.9e-08 63.2 132 37.9
Lalb_Chr13g0294931 Lupinus albus HOM05D004525 ORTHO05D005295 1.9e-08 63.2 172 35.5
ATR0620G086 Amborella trichopoda HOM05D004525 ORTHO05D005295 2.5e-08 62.8 129 37.2
Phvul.003G069600 Phaseolus vulgaris HOM05D004525 ORTHO05D005295 3.3e-08 62.4 177 35.0
HPP92_025871 Vanilla planifolia HOM05D004525 ORTHO05D005295 3.3e-08 62.4 169 33.1
Sc01g0010720 Simmondsia chinensis HOM05D004525 ORTHO05D005295 5.6e-08 61.6 176 36.4
AL7G47302 Arabidopsis lyrata HOM05D004525 ORTHO05D005295 1.2e-07 60.5 137 35.8
PSO017G1681 Papaver somniferum HOM05D004525 ORTHO05D005295 1.6e-07 60.1 178 33.7
PSO478G2085 Papaver somniferum HOM05D004525 ORTHO05D005295 2.1e-07 59.7 178 33.7
Psat7g073160 Pisum sativum HOM05D004525 ORTHO05D005295 4.7e-07 58.5 172 33.7
CARHR025300 Cardamine hirsuta HOM05D004525 ORTHO05D005295 1.4e-06 57.0 167 32.3
Ah.12g053230 Amaranthus hybridus HOM05D004525 ORTHO05D005295 1.8e-06 56.6 135 34.8
Cfa007058 Carpinus fangiana HOM05D004525 ORTHO05D005295 3.0e-06 55.8 111 41.4
CDE07G1557 Ceratophyllum demersum HOM05D004525 ORTHO05D005295 3.0e-06 55.8 132 33.3
AUR62007057 Chenopodium quinoa HOM05D004525 ORTHO05D005295 3.0e-06 55.8 174 32.2
Lj8A200T57 Lonicera japonica HOM05D004525 ORTHO05D005295 3.0e-06 55.8 127 37.8
Aqoxy3G00526 Aquilegia oxysepala HOM05D004525 ORTHO05D005295 4.0e-06 55.5 178 33.7
Aqoxy5G04330 Aquilegia oxysepala HOM05D004525 ORTHO05D005295 4.0e-06 55.5 178 33.7
BraA09t39504Z Brassica rapa HOM05D004525 ORTHO05D005295 4.0e-06 55.5 141 32.6
Carub.0001s2436 Capsella rubella HOM05D004525 ORTHO05D005295 4.0e-06 55.5 171 31.6


User provided reference genes

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