Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold104G30217 Striga asiatica HOM05D003010 ORTHO05D003623 3.3e-147 525.0 265 100.0
Migut.A01045 Erythranthe guttata HOM05D003010 ORTHO05D003623 1.4e-12 77.8 79 57.0
Oeu017218.3 Olea europaea HOM05D003010 ORTHO05D003623 2.6e-11 73.6 79 53.2
Dinv28854 Davidia involucrata HOM05D003010 ORTHO05D003623 1.9e-09 67.4 79 41.8
Haze_07981 Corylus avellana HOM05D003010 ORTHO05D003623 2.5e-09 67.0 81 46.9
Dinv21689 Davidia involucrata HOM05D003010 ORTHO05D003623 3.2e-09 66.6 80 42.5
COL.COLO4_21678 Corchorus olitorius HOM05D003010 ORTHO05D003623 5.5e-09 65.9 82 43.9
TWI81G0439 Tripterygium wilfordii HOM05D003010 ORTHO05D003623 5.5e-09 65.9 81 43.2
Duzib205G1418 Durio zibethinus HOM05D003010 ORTHO05D003623 7.2e-09 65.5 87 42.5
Gohir.A08G165900 Gossypium hirsutum HOM05D003010 ORTHO05D003623 9.4e-09 65.1 88 44.3
Gorai.004G194100 Gossypium raimondii HOM05D003010 ORTHO05D003623 9.4e-09 65.1 88 44.3
Ciclev10023073m.g Citrus clementina HOM05D003010 ORTHO05D003623 1.2e-08 64.7 80 42.5
GSVIVG01007344001 Vitis vinifera HOM05D003010 ORTHO05D003623 1.2e-08 64.7 82 43.9
Potri.001G152700 Populus trichocarpa HOM05D003010 ORTHO05D003623 1.6e-08 64.3 77 49.4
Migut.F00533 Erythranthe guttata HOM05D003010 ORTHO05D003623 2.1e-08 63.9 85 43.5
Manes.02G043601 Manihot esculenta HOM05D003010 ORTHO05D003623 2.1e-08 63.9 82 46.3
Gohir.D08G184800 Gossypium hirsutum HOM05D003010 ORTHO05D003623 2.7e-08 63.5 88 44.3
C03p22900 Brassica napus HOM05D003010 ORTHO05D003623 3.6e-08 63.2 85 44.7
Thecc.03G243800 Theobroma cacao HOM05D003010 ORTHO05D003623 3.6e-08 63.2 85 42.4
Aa31LG9G15070 Aethionema arabicum HOM05D003010 ORTHO05D003623 7.9e-08 62.0 85 43.5
CiPaw.11G070300 Carya illinoinensis HOM05D003010 ORTHO05D003623 7.9e-08 62.0 81 46.9
Nitab4.5_0009955g0020 Nicotiana tabacum HOM05D003010 ORTHO05D003623 7.9e-08 62.0 79 41.8
Actinidia25899 Actinidia chinensis HOM05D003010 ORTHO05D003623 1.0e-07 61.6 79 44.3
BcaC01g05717 Brassica carinata HOM05D003010 ORTHO05D003623 1.0e-07 61.6 88 44.3
Duzib205G1260 Durio zibethinus HOM05D003010 ORTHO05D003623 1.0e-07 61.6 84 45.2
Sabra03G0052800 Salix brachista HOM05D003010 ORTHO05D003623 1.0e-07 61.6 79 46.8
PGSC0003DMG400026255 Solanum tuberosum HOM05D003010 ORTHO05D003623 1.0e-07 61.6 79 43.0
BcaB01g03891 Brassica carinata HOM05D003010 ORTHO05D003623 1.4e-07 61.2 84 42.9
Thhalv10017475m.g Eutrema salsugineum HOM05D003010 ORTHO05D003623 1.8e-07 60.8 86 44.2
Manes.01G086500 Manihot esculenta HOM05D003010 ORTHO05D003623 1.8e-07 60.8 81 43.2
Peaxi162Scf00446g00412 Petunia axillaris HOM05D003010 ORTHO05D003623 1.8e-07 60.8 79 43.0
Solyc08g078060.3 Solanum lycopersicum HOM05D003010 ORTHO05D003623 1.8e-07 60.8 79 43.0
Sopen08g026560 Solanum pennellii HOM05D003010 ORTHO05D003623 1.8e-07 60.8 79 43.0
BolC1t02502H Brassica oleracea HOM05D000001 ORTHO05D000003 3.0e-07 60.1 96 39.6
ClCG07G017110 Citrullus lanatus HOM05D003010 ORTHO05D003623 3.0e-07 60.1 89 40.4
Eucgr.E00369 Eucalyptus grandis HOM05D003010 ORTHO05D003623 3.0e-07 60.1 91 41.8
Nitab4.5_0000500g0010 Nicotiana tabacum HOM05D003010 ORTHO05D003623 3.0e-07 60.1 79 40.5
Thecc.03G147400 Theobroma cacao HOM05D003010 ORTHO05D003623 3.0e-07 60.1 101 40.6
HPP92_023172 Vanilla planifolia HOM05D003010 ORTHO05D003623 3.0e-07 60.1 80 40.0
Potri.003G081900 Populus trichocarpa HOM05D003010 ORTHO05D003623 3.9e-07 59.7 79 44.3
MD07G1247700 Malus domestica HOM05D003010 ORTHO05D003623 5.1e-07 59.3 93 38.7
Actinidia01040 Actinidia chinensis HOM05D000255 ORTHO05D000935 6.7e-07 58.9 85 40.0
Aqoxy3G02705 Aquilegia oxysepala HOM05D003010 ORTHO05D003623 6.7e-07 58.9 47 55.3
Actinidia31768 Actinidia chinensis HOM05D003010 ORTHO05D003623 8.8e-07 58.5 85 41.2
EL10Ac5g12296 Beta vulgaris HOM05D003010 ORTHO05D003623 8.8e-07 58.5 106 38.7
CAN.G761.23 Capsicum annuum HOM05D003010 ORTHO05D003623 8.8e-07 58.5 79 40.5
TPR.G31425 Trifolium pratense HOM05D003010 ORTHO05D003623 8.8e-07 58.5 62 43.5
CsaV3_4G004320 Cucumis sativus L. HOM05D003010 ORTHO05D003623 1.1e-06 58.2 86 41.9
GSVIVG01013867001 Vitis vinifera HOM05D003010 ORTHO05D003623 1.1e-06 58.2 82 39.0
Actinidia02185 Actinidia chinensis HOM05D003010 ORTHO05D003623 1.5e-06 57.8 80 40.0
Haze_22213 Corylus avellana HOM05D000255 ORTHO05D000935 1.5e-06 57.8 87 43.7
MBI04_g29855_MAGBIO Magnolia biondii HOM05D005914 ORTHO05D007361 1.5e-06 57.8 80 42.5
Nn1g00825 Nelumbo nucifera HOM05D003010 ORTHO05D003623 1.5e-06 57.8 92 39.1
Peaxi162Scf00167g01022 Petunia axillaris HOM05D003010 ORTHO05D003623 1.5e-06 57.8 92 37.0
Hund14501 Selenicereus undatus HOM05D003010 ORTHO05D003623 1.5e-06 57.8 82 42.7
SGA_v2.0_scaffold60G20833 Striga asiatica HOM05D003010 ORTHO05D003623 1.5e-06 57.8 86 38.4
Cfa013595 Carpinus fangiana HOM05D000255 ORTHO05D000935 2.6e-06 57.0 87 42.5
Nitab4.5_0002211g0010 Nicotiana tabacum HOM05D003010 ORTHO05D003623 2.6e-06 57.0 91 35.2
Nitab4.5_0002236g0070 Nicotiana tabacum HOM05D003010 ORTHO05D003623 2.6e-06 57.0 91 35.2
Rhsim04G0160200 Rhododendron simsii HOM05D003010 ORTHO05D003623 2.6e-06 57.0 80 41.2
vmacro00038 Vaccinium macrocarpon HOM05D003010 ORTHO05D003623 2.6e-06 57.0 79 41.8
Sc01g0008150 Simmondsia chinensis HOM05D003010 ORTHO05D003623 3.3e-06 56.6 119 34.5
CARHR129910 Cardamine hirsuta HOM05D003010 ORTHO05D003623 4.4e-06 56.2 85 40.0
Lj8C48T14 Lonicera japonica HOM05D003010 ORTHO05D003623 5.7e-06 55.8 86 37.2
Nn6g33810 Nelumbo nucifera HOM05D003010 ORTHO05D003623 5.7e-06 55.8 88 37.5
AL4G31750 Arabidopsis lyrata HOM05D003010 ORTHO05D003623 7.4e-06 55.5 89 42.7
AT2G35658 Arabidopsis thaliana HOM05D003010 ORTHO05D003623 7.4e-06 55.5 89 42.7
BolC3t14689H Brassica oleracea HOM05D003010 ORTHO05D003623 7.4e-06 55.5 89 43.8
BraA01t01964Z Brassica rapa HOM05D000001 ORTHO05D009942 7.4e-06 55.5 83 42.2
MELO3C017634.2 Cucumis melo HOM05D003010 ORTHO05D003623 7.4e-06 55.5 86 39.5
Gohir.D09G249800 Gossypium hirsutum HOM05D003010 ORTHO05D003623 7.4e-06 55.5 110 39.1
Gorai.006G274200 Gossypium raimondii HOM05D003010 ORTHO05D003623 7.4e-06 55.5 110 39.1
MD06G1049300 Malus domestica HOM05D003010 ORTHO05D003623 7.4e-06 55.5 92 38.0
TAR636G0256 Trochodendron aralioides HOM05D003010 ORTHO05D003623 7.4e-06 55.5 82 36.6
Carub.0004s1739 Capsella rubella HOM05D003010 ORTHO05D003623 9.7e-06 55.1 82 41.5
Lalb_Chr09g0324231 Lupinus albus HOM05D003010 ORTHO05D003623 9.7e-06 55.1 80 38.8
Prupe.5G059800 Prunus persica HOM05D003010 ORTHO05D003623 9.7e-06 55.1 87 37.9
Sed0025535 Sechium edule HOM05D003010 ORTHO05D003623 9.7e-06 55.1 86 39.5
Solyc05g052080.1 Solanum lycopersicum HOM05D003010 ORTHO05D003623 9.7e-06 55.1 102 35.3


User provided reference genes

Program Settings