Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold104G30177 Striga asiatica HOM05D006677 ORTHO05D008348 0.0e+00 1614.0 813 100.0
Migut.A01134 Erythranthe guttata HOM05D006677 ORTHO05D008348 0.0e+00 1188.7 819 74.7
MSTRG.12123 Avicennia marina HOM05D006677 ORTHO05D008348 0.0e+00 1163.7 804 74.3
SalBow6G5281 Salvia bowleyana HOM05D006677 ORTHO05D008348 0.0e+00 1125.2 848 68.4
Nitab4.5_0001381g0100 Nicotiana tabacum HOM05D006677 ORTHO05D008348 1.3e-295 1019.6 804 62.9
Sopen08g026930 Solanum pennellii HOM05D006677 ORTHO05D008348 4.8e-290 1001.1 807 62.5
CAN.G1178.20 Capsicum annuum HOM05D006677 ORTHO05D008348 7.7e-288 993.8 810 61.6
Solyc08g078440.3 Solanum lycopersicum HOM05D006677 ORTHO05D008348 7.7e-288 993.8 807 62.1
Peaxi162Scf00209g00130 Petunia axillaris HOM05D006677 ORTHO05D008348 2.2e-287 992.3 810 61.5
Hma1.2p1_0316F.1_g122840 Hydrangea macrophylla HOM05D006677 ORTHO05D008348 2.5e-286 988.8 813 62.0
Nitab4.5_0002289g0120 Nicotiana tabacum HOM05D006677 ORTHO05D008348 4.7e-277 958.0 809 60.3
Lj2C223G6 Lonicera japonica HOM05D006677 ORTHO05D008348 9.8e-275 950.3 821 58.8
Cc08_g12180 Coffea canephora HOM05D006677 ORTHO05D008348 6.3e-274 947.6 806 59.2
CSS0025591 Camellia sinensis var. sinensis HOM05D006677 ORTHO05D008348 1.0e-271 940.3 812 59.4
Thecc.03G248200 Theobroma cacao HOM05D006677 ORTHO05D008348 3.5e-264 915.2 816 56.6
COL.COLO4_37128 Corchorus olitorius HOM05D006677 ORTHO05D008348 1.0e-263 913.7 820 56.0
CSS0006614 Camellia sinensis var. sinensis HOM05D006677 ORTHO05D008348 4.3e-262 908.3 812 58.0
CANSAT21G0792 Cannabis sativa HOM05D006677 ORTHO05D008348 4.3e-262 908.3 829 55.4
vmacro14066 Vaccinium macrocarpon HOM05D006677 ORTHO05D008348 6.2e-261 904.4 817 57.3
Rhsim07G0111300 Rhododendron simsii HOM05D006677 ORTHO05D008348 4.0e-260 901.7 811 57.8
DCAR_004989 Daucus carota HOM05D006677 ORTHO05D008348 6.4e-258 894.4 812 56.4
MD06G1053300 Malus domestica HOM05D006677 ORTHO05D008348 1.1e-257 893.6 831 55.2
Cfa012688 Carpinus fangiana HOM05D006677 ORTHO05D008348 2.4e-257 892.5 816 56.9
Duzib068G0477 Durio zibethinus HOM05D006677 ORTHO05D008348 2.7e-256 889.0 820 55.6
Rhsim07G0110800 Rhododendron simsii HOM05D006677 ORTHO05D008348 2.7e-256 889.0 832 56.2
Oeu017057.2 Olea europaea HOM05D006677 ORTHO05D008348 1.9e-254 882.9 848 57.3
Haze_07944 Corylus avellana HOM05D006677 ORTHO05D008348 7.3e-254 880.9 869 53.7
MD04G1060300 Malus domestica HOM05D006677 ORTHO05D008348 9.5e-254 880.6 826 55.2
TAR374G0600 Trochodendron aralioides HOM05D006677 ORTHO05D008348 2.8e-253 879.0 824 56.1
Gorai.008G233700 Gossypium raimondii HOM05D006677 ORTHO05D008348 4.7e-253 878.2 819 54.1
Prupe.5G065400 Prunus persica HOM05D006677 ORTHO05D008348 1.2e-251 873.6 818 54.8
Gohir.D12G218100 Gossypium hirsutum HOM05D006677 ORTHO05D008348 1.5e-251 873.2 819 53.7
TWI60G0317 Tripterygium wilfordii HOM05D006677 ORTHO05D008348 2.0e-251 872.8 811 54.3
PGR031G0681 Punica granatum HOM05D006677 ORTHO05D008348 7.5e-251 870.9 815 55.2
RcHm_v2.0_Chr7g0203921 Rosa chinensis HOM05D006677 ORTHO05D008348 6.4e-250 867.8 813 54.7
Gohir.A12G215500 Gossypium hirsutum HOM05D006677 ORTHO05D008348 7.1e-249 864.4 816 53.7
Dinv21656 Davidia involucrata HOM05D006677 ORTHO05D008348 2.7e-248 862.4 663 64.4
Sc22g0000980 Simmondsia chinensis HOM05D006677 ORTHO05D008348 2.3e-247 859.4 812 54.8
FAN13G0013 Fragaria x ananassa HOM05D006677 ORTHO05D008348 5.6e-246 854.7 815 54.0
FAN04G1892 Fragaria x ananassa HOM05D006677 ORTHO05D008348 3.6e-245 852.0 812 54.1
Manes.02G041400 Manihot esculenta HOM05D006677 ORTHO05D008348 1.1e-244 850.5 816 53.8
CiPaw.12G050300 Carya illinoinensis HOM05D006677 ORTHO05D008348 3.1e-244 849.0 817 56.4
FvH4_5g19410 Fragaria vesca HOM05D006677 ORTHO05D008348 5.2e-244 848.2 812 53.8
FAN08G3018 Fragaria x ananassa HOM05D006677 ORTHO05D008348 6.8e-244 847.8 812 54.2
Atru.chr9.1276 Acer truncatum HOM05D006677 ORTHO05D008348 1.2e-243 847.0 819 54.3
Duzib205G2017 Durio zibethinus HOM05D006677 ORTHO05D008348 5.8e-243 844.7 820 53.3
FAN18G1193 Fragaria x ananassa HOM05D006677 ORTHO05D008348 2.2e-242 842.8 812 53.4
Nn6g33880 Nelumbo nucifera HOM05D006677 ORTHO05D008348 4.9e-242 841.6 826 53.5
Ciclev10018892m.g Citrus clementina HOM05D006677 ORTHO05D008348 6.4e-242 841.3 824 54.5
Hund14577 Selenicereus undatus HOM05D006677 ORTHO05D008348 1.6e-240 836.6 818 54.2
QL12p011426 Quercus lobata HOM05D006677 ORTHO05D008348 1.0e-239 833.9 875 51.2
HanXRQChr16g0501081 Helianthus annuus HOM05D006677 ORTHO05D008348 2.3e-239 832.8 810 54.0
arahy.Tifrunner.gnm1.ann1.IBE8NF Arachis hypogaea HOM05D006677 ORTHO05D008348 3.0e-239 832.4 843 52.6
arahy.Tifrunner.gnm1.ann1.WU4RWF Arachis hypogaea HOM05D006677 ORTHO05D008348 3.0e-239 832.4 843 52.6
AUR62019973 Chenopodium quinoa HOM05D006677 ORTHO05D008348 3.3e-238 828.9 816 53.4
THA.LOC104806670 Tarenaya hassleriana HOM05D006677 ORTHO05D008348 3.3e-238 828.9 823 52.1
AUR62007111 Chenopodium quinoa HOM05D006677 ORTHO05D008348 4.3e-238 828.6 813 53.8
Potri.001G155800 Populus trichocarpa HOM05D006677 ORTHO05D008348 4.7e-237 825.1 814 52.9
Aqoxy7G00821 Aquilegia oxysepala HOM05D006677 ORTHO05D008348 6.2e-237 824.7 823 52.6
EL10Ac5g12357 Beta vulgaris HOM05D006677 ORTHO05D008348 1.7e-234 816.6 812 52.1
Ah.12g054330 Amaranthus hybridus HOM05D006677 ORTHO05D008348 1.3e-231 807.0 815 51.8
AL8G10640 Arabidopsis lyrata HOM05D006677 ORTHO05D008348 1.3e-231 807.0 813 49.8
CARHR173970 Cardamine hirsuta HOM05D006677 ORTHO05D008348 1.3e-231 807.0 812 50.0
Lsat_1_v5_gn_6_18041 Lactuca sativa HOM05D006677 ORTHO05D008348 1.3e-231 807.0 815 52.9
Sp2g12115 Schrenkiella parvula HOM05D006677 ORTHO05D008348 6.6e-231 804.7 812 50.4
Carub.0008s0038 Capsella rubella HOM05D006677 ORTHO05D008348 7.3e-230 801.2 810 50.2
Lalb_Chr05g0221161 Lupinus albus HOM05D006677 ORTHO05D008348 1.6e-229 800.0 807 52.9
Thhalv10000783m.g Eutrema salsugineum HOM05D006677 ORTHO05D008348 2.8e-229 799.3 810 50.0
Actinidia26803 Actinidia chinensis HOM05D006677 ORTHO05D008348 5.3e-228 795.0 656 60.8
AT5G47400 Arabidopsis thaliana HOM05D006677 ORTHO05D008348 1.2e-227 793.9 815 49.8
BolC7t43648H Brassica oleracea HOM05D006677 ORTHO05D008348 3.4e-227 792.3 811 49.8
C07p31040 Brassica napus HOM05D006677 ORTHO05D008348 9.9e-227 790.8 811 49.8
BcaC06g34255 Brassica carinata HOM05D006677 ORTHO05D008348 1.7e-226 790.0 812 49.6
HanXRQChr08g0227751 Helianthus annuus HOM05D006677 ORTHO05D008348 2.2e-226 789.6 812 52.1
Lj4g0000262 Lotus japonicus HOM05D006677 ORTHO05D008348 5.4e-225 785.0 813 51.0
Ca_21980_v3 Cicer arietinum L. HOM05D006677 ORTHO05D008348 2.1e-224 783.1 822 50.7
ECA233G6125 Erigeron canadensis HOM05D006677 ORTHO05D008348 1.3e-221 773.9 766 54.2
Manes.01G083200 Manihot esculenta HOM05D006677 ORTHO05D008348 4.8e-221 771.9 815 49.9
A06p45110 Brassica napus HOM05D006677 ORTHO05D008348 9.9e-219 764.2 810 48.8
Glyma.17G143800 Glycine max HOM05D006677 ORTHO05D008348 7.9e-216 754.6 824 50.0
BraA06t27381Z Brassica rapa HOM05D006677 ORTHO05D008348 3.0e-215 752.7 811 48.7
Medtr4g100700 Medicago truncatula HOM05D006677 ORTHO05D008348 1.5e-214 750.4 822 49.0
Aa31sc151G40 Aethionema arabicum HOM05D006677 ORTHO05D008348 3.1e-212 742.7 775 49.0
Phvul.003G222500 Phaseolus vulgaris HOM05D006677 ORTHO05D008348 4.0e-212 742.3 826 49.9
VMungo0251G0668 Vigna mungo HOM05D006677 ORTHO05D008348 2.2e-210 736.5 813 49.7
Psat4g072920 Pisum sativum HOM05D006677 ORTHO05D008348 1.2e-203 714.1 802 48.0
CDE11G0086 Ceratophyllum demersum HOM05D006677 ORTHO05D008348 4.6e-200 702.2 800 47.6
HPP92_022463 Vanilla planifolia HOM05D006677 ORTHO05D008348 1.2e-195 687.6 826 45.8
BcaC06g31392 Brassica carinata HOM05D006677 ORTHO05D008348 1.1e-188 664.5 803 45.2
BcaC06g31390 Brassica carinata HOM05D006677 ORTHO05D008348 4.5e-187 659.1 688 49.3
Eucgr.D02100 Eucalyptus grandis HOM05D006677 ORTHO05D008348 2.8e-181 639.8 606 55.3
Sabra01G0125500 Salix brachista HOM05D006677 ORTHO05D008348 5.3e-172 609.0 668 49.7
ATR0057G118 Amborella trichopoda HOM05D006677 ORTHO05D008348 1.9e-169 600.5 825 41.8
unitig_21.g20314 Utricularia gibba HOM05D006677 ORTHO05D008348 8.6e-162 575.1 814 43.4
Glyma.05G062000 Glycine max HOM05D006677 ORTHO05D008348 6.8e-151 538.9 617 47.0
Zm00001eb000330 Zea mays HOM05D006677 ORTHO05D008348 1.9e-145 520.8 804 40.3
Actinidia10841 Actinidia chinensis HOM05D006677 ORTHO05D008348 8.9e-127 458.8 810 38.3
Pp3c19_23280 Physcomitrium patens HOM05D006677 ORTHO05D008348 6.9e-95 352.8 851 31.8
GSVIVG01006276001 Vitis vinifera HOM05D006677 ORTHO05D008348 3.3e-89 334.0 254 61.8
TPR.G36090 Trifolium pratense HOM05D006677 ORTHO05D008348 5.7e-89 333.2 412 44.7
TPR.G37689 Trifolium pratense HOM05D006677 ORTHO05D008348 1.5e-81 308.5 327 51.4
DCAR_004986 Daucus carota HOM05D006677 ORTHO05D008348 7.4e-81 306.2 310 53.5
DCAR_004979 Daucus carota HOM05D006677 ORTHO05D008348 2.8e-80 304.3 310 52.9
AagrBONN_evm.TU.Sc2ySwM_228.2440 Anthoceros agrestis HOM05D006677 ORTHO05D008348 1.4e-79 302.0 862 30.0
GSVIVG01006275001 Vitis vinifera HOM05D006677 ORTHO05D000005 2.6e-73 281.2 278 54.3
TAR365G0661 Trochodendron aralioides HOM05D006677 ORTHO05D008348 3.8e-69 267.3 289 48.1
Cpa.g.sc3684.1 Carica papaya HOM05D006677 ORTHO05D008348 8.0e-67 259.6 274 51.1
DCAR_004983 Daucus carota HOM05D006677 ORTHO05D008348 6.8e-50 203.4 207 53.1
TAR633G2042 Trochodendron aralioides HOM05D006677 ORTHO05D008348 7.5e-49 199.9 187 52.4
DCAR_004974 Daucus carota HOM05D006677 ORTHO05D008348 2.4e-47 194.9 212 50.9
TAR629G1120 Trochodendron aralioides HOM05D006677 ORTHO05D008348 1.0e-45 189.5 142 63.4
CBR_g16835 Chara braunii HOM05D000019 ORTHO05D000048 7.3e-36 156.8 994 21.2
CAN.G26.36 Capsicum annuum HOM05D006677 ORTHO05D008348 1.5e-33 149.1 165 46.7
Os10g0560500 Oryza sativa ssp. japonica HOM05D006677 ORTHO05D008348 3.7e-32 144.4 270 36.3
DCAR_004984 Daucus carota HOM05D006677 ORTHO05D008348 3.7e-24 117.9 107 56.1
DCAR_004972 Daucus carota HOM05D006677 ORTHO05D008348 3.0e-21 108.2 118 50.0
Cre06.g278126 Chlamydomonas reinhardtii HOM05D006677 ORTHO05D008348 3.5e-14 84.7 178 32.0
MCO13G224 Micromonas commoda HOM05D006677 ORTHO05D008348 2.1e-11 75.5 142 33.1
CAN.G1178.24 Capsicum annuum HOM05D006677 ORTHO05D008348 5.2e-10 70.9 71 52.1
TPR.G36480 Trifolium pratense HOM05D004733 ORTHO05D008348 1.5e-09 69.3 57 54.4


User provided reference genes

Program Settings