Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold104G30169 Striga asiatica HOM05D005983 ORTHO05D007438 0.0e+00 1098.6 543 100.0
Migut.A01119 Erythranthe guttata HOM05D005983 ORTHO05D007438 9.4e-181 637.5 546 61.5
SalBow6G6019 Salvia bowleyana HOM05D005983 ORTHO05D007438 2.2e-174 616.3 545 61.1
PGSC0003DMG402011882 Solanum tuberosum HOM05D005983 ORTHO05D007438 7.5e-162 574.7 547 57.0
Solyc06g060780.4 Solanum lycopersicum HOM05D005983 ORTHO05D007438 3.7e-161 572.4 547 56.9
Sopen06g020900 Solanum pennellii HOM05D005983 ORTHO05D007438 1.1e-160 570.9 547 56.7
Peaxi162Scf01022g00324 Petunia axillaris HOM05D005983 ORTHO05D007438 1.2e-159 567.4 543 56.4
Ciclev10020120m.g Citrus clementina HOM05D005983 ORTHO05D007438 2.0e-159 566.6 519 57.0
Cc08_g12250 Coffea canephora HOM05D005983 ORTHO05D007438 2.0e-159 566.6 527 56.7
CAN.G62.33 Capsicum annuum HOM05D005983 ORTHO05D007438 1.3e-158 563.9 544 56.4
Hma1.2p1_0316F.1_g122960 Hydrangea macrophylla HOM05D005983 ORTHO05D007438 1.7e-158 563.5 520 57.7
CSS0015193 Camellia sinensis var. sinensis HOM05D005983 ORTHO05D007438 3.2e-157 559.3 548 54.6
Nitab4.5_0000618g0100 Nicotiana tabacum HOM05D005983 ORTHO05D007438 9.4e-157 557.8 544 55.1
CiPaw.11G080800 Carya illinoinensis HOM05D005983 ORTHO05D007438 1.0e-155 554.3 530 57.0
HanXRQChr16g0510961 Helianthus annuus HOM05D005983 ORTHO05D007438 1.0e-155 554.3 527 55.4
Thecc.03G249100 Theobroma cacao HOM05D005983 ORTHO05D007438 2.3e-155 553.1 533 55.3
arahy.Tifrunner.gnm1.ann1.NE97L5 Arachis hypogaea HOM05D005983 ORTHO05D007438 3.0e-155 552.7 546 54.4
Dinv21647 Davidia involucrata HOM05D005983 ORTHO05D007438 3.0e-155 552.7 546 55.3
QL12p011684 Quercus lobata HOM05D005983 ORTHO05D007438 3.0e-155 552.7 573 53.6
CANSAT21G0098 Cannabis sativa HOM05D005983 ORTHO05D007438 4.0e-155 552.4 527 54.8
Eucgr.E00410 Eucalyptus grandis HOM05D005983 ORTHO05D007438 8.8e-155 551.2 548 53.1
MELO3C005523.2 Cucumis melo HOM05D005983 ORTHO05D007438 1.5e-154 550.4 549 54.1
COL.COLO4_37146 Corchorus olitorius HOM05D005983 ORTHO05D007438 2.0e-154 550.1 524 55.9
Gorai.003G172200 Gossypium raimondii HOM05D005983 ORTHO05D007438 2.0e-154 550.1 527 54.6
Potri.003G078300 Populus trichocarpa HOM05D005983 ORTHO05D007438 2.6e-154 549.7 530 55.5
Duzib084G0278 Durio zibethinus HOM05D005983 ORTHO05D007438 4.4e-154 548.9 509 56.2
MBI04_g09520_MAGBIO Magnolia biondii HOM05D005983 ORTHO05D007438 1.3e-153 547.4 507 56.8
Glyma.01G207800 Glycine max HOM05D005983 ORTHO05D007438 2.8e-153 546.2 519 55.1
Gohir.D03G163500 Gossypium hirsutum HOM05D005983 ORTHO05D007438 2.8e-153 546.2 527 54.5
Lalb_Chr05g0214371 Lupinus albus HOM05D005983 ORTHO05D007438 1.1e-152 544.3 545 53.8
DCAR_004965 Daucus carota HOM05D005983 ORTHO05D007438 2.4e-152 543.1 521 55.1
GSVIVG01004724001 Vitis vinifera HOM05D005983 ORTHO05D007438 2.4e-152 543.1 543 53.4
Sabra03G0048600 Salix brachista HOM05D005983 ORTHO05D007438 3.1e-152 542.7 533 55.5
TWI15G0813 Tripterygium wilfordii HOM05D005983 ORTHO05D007438 3.1e-152 542.7 526 54.2
Phvul.002G057200 Phaseolus vulgaris HOM05D005983 ORTHO05D007438 7.0e-152 541.6 517 55.5
VMungo1215G0088 Vigna mungo HOM05D005983 ORTHO05D007438 9.1e-152 541.2 517 55.3
Ca_24588_v3 Cicer arietinum L. HOM05D005983 ORTHO05D007438 1.2e-151 540.8 543 53.8
Gohir.A03G007500 Gossypium hirsutum HOM05D005983 ORTHO05D007438 2.0e-151 540.0 548 52.6
Sed0010070 Sechium edule HOM05D005983 ORTHO05D007438 2.7e-151 539.7 537 54.6
Medtr5g012880 Medicago truncatula HOM05D005983 ORTHO05D007438 1.0e-150 537.7 546 52.9
Nn1g00952 Nelumbo nucifera HOM05D005983 ORTHO05D007438 1.0e-150 537.7 508 54.5
Lj2g0002324 Lotus japonicus HOM05D005983 ORTHO05D007438 2.9e-150 536.2 520 55.8
TPR.G18111 Trifolium pratense HOM05D005983 ORTHO05D007438 5.0e-150 535.4 521 55.3
Psat2g176840 Pisum sativum HOM05D005983 ORTHO05D007438 6.6e-150 535.0 519 55.3
Prupe.5G066800 Prunus persica HOM05D005983 ORTHO05D007438 6.6e-150 535.0 546 53.5
Aqoxy5G03845 Aquilegia oxysepala HOM05D005983 ORTHO05D007438 8.6e-150 534.6 507 56.0
RcHm_v2.0_Chr7g0203641 Rosa chinensis HOM05D005983 ORTHO05D007438 1.9e-149 533.5 518 55.6
PGR042G2168 Punica granatum HOM05D005983 ORTHO05D007438 3.3e-149 532.7 549 53.0
MD06G1055900 Malus domestica HOM05D005983 ORTHO05D007438 7.2e-149 531.6 518 55.6
FAN08G1502 Fragaria x ananassa HOM05D005983 ORTHO05D007438 2.8e-148 529.6 518 55.2
AL7G38030 Arabidopsis lyrata HOM05D005983 ORTHO05D007438 4.7e-148 528.9 537 52.3
AT4G16700 Arabidopsis thaliana HOM05D005983 ORTHO05D007438 1.8e-147 526.9 539 52.3
FAN04G1995 Fragaria x ananassa HOM05D005983 ORTHO05D007438 3.0e-147 526.2 518 54.8
Sed0018188 Sechium edule HOM05D005983 ORTHO05D007438 4.0e-147 525.8 516 54.1
FvH4_5g19150 Fragaria vesca HOM05D005983 ORTHO05D007438 5.2e-147 525.4 518 54.8
FAN18G0274 Fragaria x ananassa HOM05D005983 ORTHO05D007438 5.2e-147 525.4 518 54.8
Aa31LG2G12890 Aethionema arabicum HOM05D005983 ORTHO05D007438 1.2e-146 524.2 531 51.8
Manes.01G082200 Manihot esculenta HOM05D005983 ORTHO05D007438 1.5e-146 523.9 480 56.7
BcaC09g50403 Brassica carinata HOM05D005983 ORTHO05D007438 4.4e-146 522.3 531 52.7
C01p25880 Brassica napus HOM05D005983 ORTHO05D007438 4.4e-146 522.3 531 52.7
BolC1t02533H Brassica oleracea HOM05D005983 ORTHO05D007438 4.4e-146 522.3 531 52.7
unitig_744.g24471 Utricularia gibba HOM05D005983 ORTHO05D007438 9.8e-146 521.2 499 53.3
BcaNung00159 Brassica carinata HOM05D005983 ORTHO05D007438 6.3e-145 518.5 551 51.7
Sp7g15340 Schrenkiella parvula HOM05D005983 ORTHO05D007438 6.3e-145 518.5 538 51.5
CARHR223230 Cardamine hirsuta HOM05D005983 ORTHO05D007438 8.3e-145 518.1 537 51.0
A01p20580 Brassica napus HOM05D005983 ORTHO05D007438 1.4e-144 517.3 531 52.2
BraA01t01986Z Brassica rapa HOM05D005983 ORTHO05D007438 1.8e-144 516.9 531 52.2
CsaV3_5G004310 Cucumis sativus L. HOM05D005983 ORTHO05D007438 1.8e-144 516.9 473 57.1
ECA233G1798 Erigeron canadensis HOM05D005983 ORTHO05D007438 1.2e-143 514.2 496 54.0
Carub.0007s2469 Capsella rubella HOM05D005983 ORTHO05D007438 1.6e-143 513.8 533 51.8
Rhsim01G0100800 Rhododendron simsii HOM05D005983 ORTHO05D007438 1.3e-142 510.8 622 47.7
PSO357G0330 Papaver somniferum HOM05D005983 ORTHO05D007438 1.9e-141 506.9 507 53.5
Lsat_1_v5_gn_6_18021 Lactuca sativa HOM05D005983 ORTHO05D007438 4.3e-141 505.8 527 53.5
PSO170G1657 Papaver somniferum HOM05D005983 ORTHO05D007438 3.6e-140 502.7 507 53.1
EL10Ac5g12377 Beta vulgaris HOM05D005983 ORTHO05D007438 4.0e-139 499.2 563 48.3
Ah.12g054210 Amaranthus hybridus HOM05D005983 ORTHO05D007438 1.3e-137 494.2 516 51.7
Atru.chr9.1290 Acer truncatum HOM05D005983 ORTHO05D007438 2.2e-137 493.4 461 56.2
ATR0317G025 Amborella trichopoda HOM05D005983 ORTHO05D007438 2.0e-135 486.9 547 49.0
ClCG01G004150 Citrullus lanatus HOM05D005983 ORTHO05D007438 1.7e-134 483.8 526 50.6
arahy.Tifrunner.gnm1.ann1.0NSC2B Arachis hypogaea HOM05D005983 ORTHO05D007438 3.0e-134 483.0 498 52.4
Hund14571 Selenicereus undatus HOM05D005983 ORTHO05D007438 6.6e-134 481.9 506 50.6
Sc01g0008340 Simmondsia chinensis HOM05D005983 ORTHO05D007438 1.5e-133 480.7 482 53.9
AUR62007103 Chenopodium quinoa HOM05D005983 ORTHO05D007438 1.2e-132 477.6 525 49.3
Os03g0101900 Oryza sativa ssp. japonica HOM05D005983 ORTHO05D007438 1.2e-132 477.6 505 49.5
AUR62019966 Chenopodium quinoa HOM05D005983 ORTHO05D007438 8.1e-132 474.9 519 49.9
Duzib205G1394 Durio zibethinus HOM05D005983 ORTHO05D007438 1.5e-130 470.7 528 50.0
HPP92_015120 Vanilla planifolia HOM05D005983 ORTHO05D007438 4.7e-124 449.1 462 50.6
Cpa.g.sc29.178 Carica papaya HOM05D005983 ORTHO05D007438 2.3e-123 446.8 456 52.6
TAR713G0001 Trochodendron aralioides HOM05D005983 ORTHO05D007438 3.1e-115 419.9 431 53.8
Thhalv10025592m.g Eutrema salsugineum HOM05D005983 ORTHO05D007438 1.5e-109 401.0 350 60.3
THA.LOC104815498 Tarenaya hassleriana HOM05D005983 ORTHO05D007438 2.8e-108 396.7 540 44.6
Mapoly0144s0014 Marchantia polymorpha HOM05D005983 ORTHO05D007438 2.6e-106 390.2 539 43.4
Pp3c10_660 Physcomitrium patens HOM05D005983 ORTHO05D007438 5.6e-101 372.5 499 44.1
SMO351G0559 Selaginella moellendorffii HOM05D005983 ORTHO05D007438 7.6e-90 335.5 490 40.0
vmacro00190 Vaccinium macrocarpon HOM05D005983 ORTHO05D007438 3.8e-89 333.2 418 48.8
Haze_01067 Corylus avellana HOM05D005983 ORTHO05D007438 6.7e-86 322.4 318 56.3
CBR_g40206 Chara braunii HOM05D005983 ORTHO05D007438 5.7e-85 319.3 583 35.3
Lj2A220G37 Lonicera japonica HOM05D005983 ORTHO05D007438 1.1e-80 305.1 206 71.4
Actinidia02145 Actinidia chinensis HOM05D005983 ORTHO05D007438 9.3e-80 302.0 228 69.3
Nitab4.5_0001076g0010 Nicotiana tabacum HOM05D005983 ORTHO05D007438 1.3e-73 281.6 351 45.3
CDE04G1583 Ceratophyllum demersum HOM05D005983 ORTHO05D007438 6.1e-71 272.7 338 45.3
Actinidia14415 Actinidia chinensis HOM05D005983 ORTHO05D007438 4.8e-68 263.1 312 47.1
Actinidia02144 Actinidia chinensis HOM05D005983 ORTHO05D007438 9.1e-67 258.8 240 54.6
Actinidia14414 Actinidia chinensis HOM05D005983 ORTHO05D007438 9.7e-53 212.2 191 60.7
Lj2A220G36 Lonicera japonica HOM05D005983 ORTHO05D007438 3.6e-47 193.7 207 52.7
Haze_01069 Corylus avellana HOM05D005983 ORTHO05D007438 4.5e-42 176.8 202 49.5
Glyma.11G034500 Glycine max HOM05D005983 ORTHO05D007438 4.5e-42 176.8 204 49.5
BcaC02g09019 Brassica carinata HOM05D005983 ORTHO05D007438 1.3e-41 175.3 325 37.5
C04p39670 Brassica napus HOM05D005983 ORTHO05D007438 1.3e-41 175.3 325 37.5
BolC4t25537H Brassica oleracea HOM05D005983 ORTHO05D007438 1.3e-41 175.3 325 37.5
CDE04G0678 Ceratophyllum demersum HOM05D005983 ORTHO05D007438 1.5e-40 171.8 136 59.6
vmacro00191 Vaccinium macrocarpon HOM05D005983 ORTHO05D007438 1.9e-40 171.4 122 68.9
C09p44540 Brassica napus HOM05D005983 ORTHO05D007438 3.2e-40 170.6 325 36.9
Cfa023268 Carpinus fangiana HOM05D005983 ORTHO05D007438 1.3e-36 158.7 486 27.2
SEGI_17682 Sequoiadendron giganteum HOM05D005983 ORTHO05D007438 2.5e-32 144.4 126 57.1
FAN13G0557 Fragaria x ananassa HOM05D005983 ORTHO05D007438 9.5e-24 115.9 92 63.0
SEGI_40726 Sequoiadendron giganteum HOM05D005983 ORTHO05D007438 8.3e-20 102.8 81 59.3
BcaC03g14715 Brassica carinata HOM05D005983 ORTHO05D007438 1.3e-17 95.5 269 27.1
C02p21550 Brassica napus HOM05D005983 ORTHO05D007438 1.3e-17 95.5 269 27.1
BolC2t08295H Brassica oleracea HOM05D005983 ORTHO05D007438 1.3e-17 95.5 269 27.1
PRCOL_00002495 Prasinoderma coloniale HOM05D000251 ORTHO05D007438 2.5e-16 91.3 239 28.9
RcHm_v2.0_Chr7g0203671 Rosa chinensis HOM05D005983 ORTHO05D007438 1.2e-15 89.0 111 45.0
SEGI_40136 Sequoiadendron giganteum HOM05D005983 ORTHO05D007438 2.8e-15 87.8 99 47.5
BraA08t34844Z Brassica rapa HOM05D005983 ORTHO05D007438 3.6e-15 87.4 278 26.3
BcaC07g42540 Brassica carinata HOM05D005983 ORTHO05D007438 9.2e-11 72.8 206 27.7
Pp3s32_287 Physcomitrium patens HOM05D003620 ORTHO05D007438 6.6e-09 66.6 228 23.2
Lsat_1_v5_gn_4_25380 Lactuca sativa HOM05D005983 ORTHO05D007438 5.6e-08 63.5 44 61.4
SHI02535 Sapria himalayana HOM05D005983 ORTHO05D007438 3.6e-07 60.8 57 50.9


User provided reference genes

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