Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold104G30165 Striga asiatica HOM05D004923 ORTHO05D005940 0.0e+00 1120.1 623 100.0
MSTRG.12109 Avicennia marina HOM05D004923 ORTHO05D005940 5.0e-146 522.3 637 49.9
SalBow6G2889 Salvia bowleyana HOM05D004923 ORTHO05D005940 9.3e-92 342.0 635 40.5
Oeu020434.1 Olea europaea HOM05D004923 ORTHO05D005940 3.3e-89 333.6 638 37.8
Sopen01g053000 Solanum pennellii HOM05D004923 ORTHO05D005940 7.4e-89 332.4 659 36.0
Migut.A01112 Erythranthe guttata HOM05D004923 ORTHO05D005940 3.8e-85 320.1 638 37.6
Hma1.2p1_0702F.1_g206060 Hydrangea macrophylla HOM05D004923 ORTHO05D005940 3.2e-84 317.0 619 37.8
Cc02_g32730 Coffea canephora HOM05D004923 ORTHO05D005940 5.1e-82 309.7 646 37.2
Hma1.2p1_2453F.1_g322410 Hydrangea macrophylla HOM05D004923 ORTHO05D005940 1.8e-79 301.2 619 36.8
Solyc01g110960.4 Solanum lycopersicum HOM05D004923 ORTHO05D005940 9.1e-79 298.9 599 35.1
CSS0000935 Camellia sinensis var. sinensis HOM05D004923 ORTHO05D005940 2.6e-73 280.8 622 34.2
unitig_8.g3020 Utricularia gibba HOM05D004923 ORTHO05D005940 3.6e-67 260.4 633 32.2
Dinv40234 Davidia involucrata HOM05D004923 ORTHO05D005940 4.7e-67 260.0 593 33.9
Actinidia19810 Actinidia chinensis HOM05D004923 ORTHO05D005940 2.3e-66 257.7 632 33.4
PGSC0003DMG400001646 Solanum tuberosum HOM05D004923 ORTHO05D005940 5.2e-66 256.5 659 31.3
Rhsim05G0146200 Rhododendron simsii HOM05D004923 ORTHO05D005940 5.2e-58 229.9 625 31.8
HanXRQChr05g0158391 Helianthus annuus HOM05D004923 ORTHO05D005940 1.3e-56 225.3 631 30.6
Haze_04263 Corylus avellana HOM05D004923 ORTHO05D005940 4.8e-56 223.4 602 32.4
Cfa006523 Carpinus fangiana HOM05D004923 ORTHO05D005940 2.7e-54 217.6 635 30.2
CiPaw.07G012700 Carya illinoinensis HOM05D004923 ORTHO05D005940 1.0e-53 215.7 635 30.7
Oeu019603.1 Olea europaea HOM05D004923 ORTHO05D005940 3.6e-51 207.2 314 41.7
CARHR185930 Cardamine hirsuta HOM05D004923 ORTHO05D005940 2.7e-46 191.0 633 29.9
TAR362G1085 Trochodendron aralioides HOM05D004923 ORTHO05D005940 3.5e-46 190.7 751 26.6
Sc06g0003440 Simmondsia chinensis HOM05D004923 ORTHO05D005940 7.8e-46 189.5 656 29.3
Sabra05G0039600 Salix brachista HOM05D004923 ORTHO05D005940 1.0e-45 189.1 606 28.7
GSVIVG01022015001 Vitis vinifera HOM05D004923 ORTHO05D005940 4.3e-44 183.7 628 28.7
Sp3g03950 Schrenkiella parvula HOM05D004923 ORTHO05D005940 5.6e-44 183.3 618 29.1
Gohir.A08G212800 Gossypium hirsutum HOM05D004923 ORTHO05D005940 2.8e-43 181.0 654 27.2
QL03p002854 Quercus lobata HOM05D004923 ORTHO05D005940 4.7e-43 180.3 634 27.6
Manes.09G161700 Manihot esculenta HOM05D004923 ORTHO05D005940 3.0e-42 177.6 630 28.1
HanXRQChr15g0493471 Helianthus annuus HOM05D004923 ORTHO05D005940 3.4e-41 174.1 591 29.9
Lalb_Chr02g0148481 Lupinus albus HOM05D004923 ORTHO05D005940 9.8e-41 172.6 600 28.5
QL03p003582 Quercus lobata HOM05D004923 ORTHO05D005940 3.7e-40 170.6 634 27.1
Cpa.g.sc84.119 Carica papaya HOM05D004923 ORTHO05D005940 1.1e-39 169.1 643 28.8
Eucgr.B02029 Eucalyptus grandis HOM05D004923 ORTHO05D005940 1.1e-39 169.1 644 26.4
THA.LOC104818671 Tarenaya hassleriana HOM05D004923 ORTHO05D005940 3.2e-39 167.5 589 27.7
ClCG02G016160 Citrullus lanatus HOM05D004923 ORTHO05D005940 7.0e-39 166.4 639 28.0
TWI56G0946 Tripterygium wilfordii HOM05D004923 ORTHO05D005940 1.6e-38 165.2 629 26.6
BcaNung04359 Brassica carinata HOM05D004923 ORTHO05D005940 2.0e-38 164.9 631 27.9
AT5G27330 Arabidopsis thaliana HOM05D004923 ORTHO05D005940 7.8e-38 162.9 635 28.5
Lj9P678T27 Lonicera japonica HOM05D004923 ORTHO05D005940 2.3e-37 161.4 385 31.7
Sed0008414 Sechium edule HOM05D004923 ORTHO05D005940 3.9e-37 160.6 631 28.1
arahy.Tifrunner.gnm1.ann1.96LETV Arachis hypogaea HOM05D004923 ORTHO05D005940 1.5e-36 158.7 627 24.7
C05p62100 Brassica napus HOM05D004923 ORTHO05D005940 1.9e-36 158.3 631 28.7
BolC5t34868H Brassica oleracea HOM05D004923 ORTHO05D005940 1.9e-36 158.3 631 28.7
Ciclev10000602m.g Citrus clementina HOM05D004923 ORTHO05D005940 2.5e-36 157.9 596 26.7
Gorai.004G244000 Gossypium raimondii HOM05D004923 ORTHO05D005940 2.8e-35 154.5 668 25.9
Gohir.D08G229800 Gossypium hirsutum HOM05D004923 ORTHO05D005940 8.0e-35 152.9 668 26.0
AUR62000899 Chenopodium quinoa HOM05D004923 ORTHO05D005940 5.2e-34 150.2 617 27.1
AL3G15510 Arabidopsis lyrata HOM05D004923 ORTHO05D005940 3.4e-33 147.5 641 26.4
arahy.Tifrunner.gnm1.ann1.VPW6I2 Arachis hypogaea HOM05D004923 ORTHO05D005940 7.5e-33 146.4 629 26.1
AUR62005075 Chenopodium quinoa HOM05D004923 ORTHO05D005940 1.3e-32 145.6 607 27.8
MELO3C004316.2 Cucumis melo HOM05D004923 ORTHO05D005940 1.3e-32 145.6 644 26.7
Glyma.10G157900 Glycine max HOM05D004923 ORTHO05D005940 2.9e-32 144.4 629 27.5
Nn4g26097 Nelumbo nucifera HOM05D004923 ORTHO05D005940 1.1e-31 142.5 756 25.3
PGR083G0910 Punica granatum HOM05D004923 ORTHO05D005940 1.9e-31 141.7 594 25.6
CAN.G1329.24 Capsicum annuum HOM05D004923 ORTHO05D005940 3.2e-31 141.0 655 26.4
Thecc.05G297900 Theobroma cacao HOM05D004923 ORTHO05D005940 4.1e-31 140.6 674 26.9
Lsat_1_v5_gn_5_38100 Lactuca sativa HOM05D004923 ORTHO05D005940 5.4e-31 140.2 641 24.3
C07p40590 Brassica napus HOM05D004923 ORTHO05D005940 7.0e-31 139.8 631 25.7
Sp2g20550 Schrenkiella parvula HOM05D004923 ORTHO05D005940 2.0e-30 138.3 616 25.3
CiPaw.08G168100 Carya illinoinensis HOM05D004923 ORTHO05D005940 7.8e-30 136.3 256 34.0
ECA246G1289 Erigeron canadensis HOM05D004923 ORTHO05D005940 7.8e-30 136.3 734 24.3
Carub.0006s2521 Capsella rubella HOM05D004923 ORTHO05D005940 3.0e-29 134.4 639 27.2
AT3G05130 Arabidopsis thaliana HOM05D004923 ORTHO05D005940 3.9e-29 134.0 648 26.7
Potri.013G028600 Populus trichocarpa HOM05D004923 ORTHO05D005940 3.9e-29 134.0 629 25.6
AL6G39740 Arabidopsis lyrata HOM05D004923 ORTHO05D005940 1.1e-28 132.5 638 27.3
Sabra13G0028900 Salix brachista HOM05D004923 ORTHO05D005940 3.3e-28 131.0 631 24.9
Ah.04g159880 Amaranthus hybridus HOM05D004923 ORTHO05D005940 2.8e-27 127.9 649 25.0
Duzib177G0588 Durio zibethinus HOM05D004923 ORTHO05D005940 3.6e-27 127.5 671 26.1
Gohir.A11G260600 Gossypium hirsutum HOM05D004923 ORTHO05D005940 6.2e-27 126.7 625 24.3
Thhalv10003823m.g Eutrema salsugineum HOM05D004923 ORTHO05D005940 1.4e-26 125.6 630 24.9
MD12G1227100 Malus domestica HOM05D004923 ORTHO05D005940 1.8e-26 125.2 302 35.4
DCAR_029454 Daucus carota HOM05D004923 ORTHO05D005940 2.6e-25 121.3 630 26.5
Prupe.6G332700 Prunus persica HOM05D004923 ORTHO05D005940 2.6e-25 121.3 643 26.3
THA.LOC104821702 Tarenaya hassleriana HOM05D004923 ORTHO05D005940 5.8e-25 120.2 645 26.5
Carub.0003s0437 Capsella rubella HOM05D004923 ORTHO05D005940 1.3e-24 119.0 636 25.0
arahy.Tifrunner.gnm1.ann1.S9CKM7 Arachis hypogaea HOM05D004923 ORTHO05D005940 3.7e-24 117.5 595 24.5
Lj8C55T15 Lonicera japonica HOM05D004923 ORTHO05D005940 8.3e-24 116.3 300 36.0
Aqoxy2G03170 Aquilegia oxysepala HOM05D004923 ORTHO05D005940 1.1e-23 115.9 690 21.7
Lj5g0013750 Lotus japonicus HOM05D004923 ORTHO05D005940 1.4e-23 115.5 699 24.6
BcaNung02477 Brassica carinata HOM05D004923 ORTHO05D005940 5.4e-23 113.6 631 24.7
Manes.08G124600 Manihot esculenta HOM05D004923 ORTHO05D005940 2.1e-22 111.7 322 29.5
Glyma.20G230700 Glycine max HOM05D004923 ORTHO05D005940 3.5e-22 110.9 637 26.1
Nn4g26098 Nelumbo nucifera HOM05D004923 ORTHO05D005940 1.7e-21 108.6 719 23.2
MBI18_g16961_MAGBIO Magnolia biondii HOM05D004923 ORTHO05D005940 3.0e-21 107.8 682 22.3
Peaxi162Scf00016g10236 Petunia axillaris HOM05D004923 ORTHO05D005940 1.9e-20 105.1 605 24.6
Peaxi162Scf00413g00516 Petunia axillaris HOM05D004923 ORTHO05D005940 2.5e-20 104.8 264 31.4
Gohir.D11G270900 Gossypium hirsutum HOM05D004923 ORTHO05D005940 5.6e-20 103.6 652 23.0
Nitab4.5_0000003g0420 Nicotiana tabacum HOM05D004923 ORTHO05D005940 7.3e-20 103.2 659 22.8
BraA05t23008Z Brassica rapa HOM05D004923 ORTHO05D005940 1.6e-19 102.1 628 26.3
CANSAT54G1324 Cannabis sativa HOM05D004923 ORTHO05D005940 3.6e-19 100.9 753 23.6
FAN09G1938 Fragaria x ananassa HOM05D004923 ORTHO05D005940 3.6e-19 100.9 638 24.3
Phvul.007G183300 Phaseolus vulgaris HOM05D004923 ORTHO05D005940 4.7e-19 100.5 388 26.5
COL.COLO4_13559 Corchorus olitorius HOM05D004923 ORTHO05D005940 5.2e-18 97.1 208 32.2
Gorai.007G291400 Gossypium raimondii HOM05D004923 ORTHO05D005940 8.9e-18 96.3 655 21.8
Nitab4.5_0008768g0010 Nicotiana tabacum HOM05D004923 ORTHO05D005940 1.3e-16 92.4 653 22.8
CARHR079450 Cardamine hirsuta HOM05D004923 ORTHO05D005940 1.7e-16 92.0 245 30.6
CsaV3_2G004820 Cucumis sativus L. HOM05D004923 ORTHO05D005940 6.4e-16 90.1 631 23.8
Peaxi162Scf00351g00530 Petunia axillaris HOM05D004923 ORTHO05D005940 6.4e-16 90.1 277 28.5
ECA233G0604 Erigeron canadensis HOM05D004923 ORTHO05D005940 1.9e-15 88.6 410 25.4
MD04G1212300 Malus domestica HOM05D004923 ORTHO05D005940 1.9e-15 88.6 624 24.2
Potri.005G040500 Populus trichocarpa HOM05D004923 ORTHO05D005940 2.4e-15 88.2 635 24.3
TPR.G2744 Trifolium pratense HOM05D004923 ORTHO05D005940 2.7e-14 84.7 158 34.8
Aa31LG11G9060 Aethionema arabicum HOM05D004923 ORTHO05D005940 6.0e-14 83.6 633 21.8
FAN02G0211 Fragaria x ananassa HOM05D004923 ORTHO05D005940 3.0e-13 81.3 650 22.5
Atru.chr2.532 Acer truncatum HOM05D004923 ORTHO05D005940 6.6e-13 80.1 657 22.4
Psat6g148400 Pisum sativum HOM05D004923 ORTHO05D005940 6.6e-13 80.1 144 36.1
A05p42440 Brassica napus HOM05D004923 ORTHO05D005940 8.7e-13 79.7 635 24.1
VMungo0720G2495 Vigna mungo HOM05D004923 ORTHO05D005940 1.1e-12 79.3 615 22.0
CDE09G0746 Ceratophyllum demersum HOM05D056443 ORTHO05D005940 1.9e-12 78.6 662 23.9
RcHm_v2.0_Chr3g0453461 Rosa chinensis HOM05D004923 ORTHO05D005940 2.5e-12 78.2 636 21.5
PSO151G0084 Papaver somniferum HOM05D004923 ORTHO05D005940 4.3e-12 77.4 649 22.5
Medtr1g082215 Medicago truncatula HOM05D004923 ORTHO05D005940 5.6e-12 77.0 700 21.0
PSO151G0007 Papaver somniferum HOM05D004923 ORTHO05D005940 5.6e-12 77.0 394 24.4
PSO151G0141 Papaver somniferum HOM05D004923 ORTHO05D005940 5.6e-12 77.0 394 24.4
Ah.04g159900 Amaranthus hybridus HOM05D004923 ORTHO05D005940 2.8e-11 74.7 628 22.8
CAN.G65.101 Capsicum annuum HOM05D004923 ORTHO05D005940 2.8e-11 74.7 151 34.4
FvH4_6g04961 Fragaria vesca HOM05D004923 ORTHO05D005940 3.6e-11 74.3 645 23.3
Lsat_1_v5_gn_4_137721 Lactuca sativa HOM05D004923 ORTHO05D005940 1.8e-10 72.0 254 26.4
FAN14G0846 Fragaria x ananassa HOM05D004923 ORTHO05D005940 2.4e-10 71.6 639 24.1
Atru.chr5.1952 Acer truncatum HOM05D000107 ORTHO05D000062 2.0e-09 68.6 250 28.0
BolC7t44596H Brassica oleracea HOM05D004923 ORTHO05D005940 2.0e-09 68.6 635 22.0
FAN05G2617 Fragaria x ananassa HOM05D004923 ORTHO05D005940 4.4e-09 67.4 637 21.2
FAN05G5260 Fragaria x ananassa HOM05D004923 ORTHO05D005940 4.4e-09 67.4 637 21.4
A06p37630 Brassica napus HOM05D004923 ORTHO05D005940 2.9e-08 64.7 637 22.4
PSO170G6876 Papaver somniferum HOM05D004923 ORTHO05D005940 3.8e-08 64.3 436 20.6
Lalb_Chr18g0045421 Lupinus albus HOM05D004923 ORTHO05D005940 4.9e-08 63.9 326 26.1
Ah.04g159890 Amaranthus hybridus HOM05D004923 ORTHO05D005940 8.4e-08 63.2 108 38.9
BraA06t26683Z Brassica rapa HOM05D004923 ORTHO05D005940 4.2e-07 60.8 617 21.1
PSO302G0039 Papaver somniferum HOM05D004923 ORTHO05D005940 2.7e-06 58.2 135 29.6
Actinidia00480 Actinidia chinensis HOM05D001349 ORTHO05D005940 4.6e-06 57.4 71 53.5
Actinidia08545 Actinidia chinensis HOM05D004923 ORTHO05D005940 6.0e-06 57.0 71 52.1


User provided reference genes

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