Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold104G30129 Striga asiatica HOM05D006841 ORTHO05D008607 7.6e-286 986.5 500 100.0
SalBow2G2391 Salvia bowleyana HOM05D006841 ORTHO05D008607 3.7e-192 675.2 504 70.0
MSTRG.12683 Avicennia marina HOM05D006841 ORTHO05D008607 1.9e-183 646.4 506 67.8
Migut.N00773 Erythranthe guttata HOM05D006841 ORTHO05D008607 2.1e-179 632.9 515 66.0
Dinv28672 Davidia involucrata HOM05D006841 ORTHO05D008607 1.5e-172 610.1 495 64.2
Thecc.09G353800 Theobroma cacao HOM05D006841 ORTHO05D008607 7.3e-172 607.8 443 68.6
Prupe.6G052600 Prunus persica HOM05D006841 ORTHO05D008607 9.6e-172 607.4 457 66.3
Potri.009G075200 Populus trichocarpa HOM05D006841 ORTHO05D008607 1.2e-171 607.1 483 62.9
Oeu018490.1 Olea europaea HOM05D006841 ORTHO05D008607 1.6e-171 606.7 504 63.9
Ciclev10028251m.g Citrus clementina HOM05D006841 ORTHO05D008607 4.7e-171 605.1 468 65.8
Manes.02G217600 Manihot esculenta HOM05D006841 ORTHO05D008607 6.2e-171 604.7 450 66.7
CSS0042618 Camellia sinensis var. sinensis HOM05D006841 ORTHO05D008607 3.1e-170 602.4 515 61.0
Gohir.A05G108000 Gossypium hirsutum HOM05D006841 ORTHO05D008607 6.9e-170 601.3 469 65.0
Duzib170G1072 Durio zibethinus HOM05D006841 ORTHO05D008607 9.0e-170 600.9 472 65.7
COL.COLO4_11072 Corchorus olitorius HOM05D006841 ORTHO05D008607 1.2e-169 600.5 440 68.2
Gorai.009G112400 Gossypium raimondii HOM05D006841 ORTHO05D008607 3.4e-169 599.0 452 66.2
Phvul.006G071400 Phaseolus vulgaris HOM05D006841 ORTHO05D008607 1.7e-168 596.7 457 65.6
Duzib168G0722 Durio zibethinus HOM05D006841 ORTHO05D008607 1.1e-167 594.0 482 63.7
Gohir.D05G108200 Gossypium hirsutum HOM05D006841 ORTHO05D008607 1.4e-167 593.6 452 65.5
Eucgr.B02230 Eucalyptus grandis HOM05D006841 ORTHO05D008607 1.9e-167 593.2 492 62.6
MD03G1062600 Malus domestica HOM05D006841 ORTHO05D008607 1.9e-167 593.2 453 64.9
Sabra09G0057100 Salix brachista HOM05D006841 ORTHO05D008607 1.9e-167 593.2 479 62.6
vmacro14612 Vaccinium macrocarpon HOM05D006841 ORTHO05D008607 2.4e-167 592.8 510 60.4
Rhsim01G0239400 Rhododendron simsii HOM05D006841 ORTHO05D008607 3.2e-167 592.4 514 61.1
PGR102G0989 Punica granatum HOM05D006841 ORTHO05D008607 7.1e-167 591.3 449 65.3
FAN11G0941 Fragaria x ananassa HOM05D006841 ORTHO05D008607 9.3e-167 590.9 457 64.6
Glyma.11G167300 Glycine max HOM05D006841 ORTHO05D008607 9.3e-167 590.9 454 66.1
Atru.chr3.4145 Acer truncatum HOM05D006841 ORTHO05D008607 1.2e-166 590.5 485 61.6
CANSAT54G0320 Cannabis sativa HOM05D006841 ORTHO05D008607 1.2e-166 590.5 493 61.9
RcHm_v2.0_Chr5g0070721 Rosa chinensis HOM05D006841 ORTHO05D008607 1.2e-166 590.5 508 61.8
arahy.Tifrunner.gnm1.ann1.1QT3IR Arachis hypogaea HOM05D006841 ORTHO05D008607 1.6e-166 590.1 458 65.3
Glyma.18G059800 Glycine max HOM05D006841 ORTHO05D008607 2.1e-166 589.7 456 64.7
CiPaw.14G056400 Carya illinoinensis HOM05D006841 ORTHO05D008607 3.5e-166 589.0 511 61.8
FvH4_3g39290 Fragaria vesca HOM05D006841 ORTHO05D008607 4.6e-166 588.6 457 64.3
Actinidia34467 Actinidia chinensis HOM05D006841 ORTHO05D008607 1.3e-165 587.0 510 61.0
arahy.Tifrunner.gnm1.ann1.UR06JS Arachis hypogaea HOM05D006841 ORTHO05D008607 1.7e-165 586.6 493 62.1
TAR369G0096 Trochodendron aralioides HOM05D006841 ORTHO05D008607 2.3e-165 586.3 456 64.9
FAN25G3694 Fragaria x ananassa HOM05D006841 ORTHO05D008607 3.0e-165 585.9 457 63.9
FAN21G2904 Fragaria x ananassa HOM05D006841 ORTHO05D008607 5.1e-165 585.1 457 64.1
TAR636G1839 Trochodendron aralioides HOM05D006841 ORTHO05D008607 6.6e-165 584.7 475 62.1
unitig_94.g28363 Utricularia gibba HOM05D006841 ORTHO05D008607 1.1e-164 583.9 501 61.5
MD11G1066200 Malus domestica HOM05D006841 ORTHO05D008607 4.3e-164 582.0 452 64.2
Psat5g157440 Pisum sativum HOM05D006841 ORTHO05D008607 1.3e-163 580.5 447 65.8
Lj6g0024894 Lotus japonicus HOM05D006841 ORTHO05D008607 2.1e-163 579.7 492 61.4
Solyc05g012140.3 Solanum lycopersicum HOM05D006841 ORTHO05D008607 1.4e-162 577.0 458 64.2
HanXRQChr01g0011601 Helianthus annuus HOM05D006841 ORTHO05D008607 4.0e-162 575.5 505 58.8
Lalb_Chr18g0051231 Lupinus albus HOM05D006841 ORTHO05D008607 5.3e-162 575.1 486 61.1
CiPaw.13G073200 Carya illinoinensis HOM05D006841 ORTHO05D008607 9.0e-162 574.3 458 64.2
TWI79G1747 Tripterygium wilfordii HOM05D006841 ORTHO05D008607 9.0e-162 574.3 512 59.6
CsaV3_6G016010 Cucumis sativus L. HOM05D006841 ORTHO05D008607 2.6e-161 572.8 492 60.0
PGSC0003DMG401028313 Solanum tuberosum HOM05D006841 ORTHO05D008607 2.6e-161 572.8 458 64.2
Sopen05g006930 Solanum pennellii HOM05D006841 ORTHO05D008607 3.4e-161 572.4 509 60.1
CSS0014141 Camellia sinensis var. sinensis HOM05D006841 ORTHO05D008607 5.8e-161 571.6 515 58.6
MELO3C026835.2 Cucumis melo HOM05D006841 ORTHO05D008607 7.6e-161 571.2 484 60.7
Sc06g0008150 Simmondsia chinensis HOM05D006841 ORTHO05D008607 7.6e-161 571.2 450 64.4
Haze_24381 Corylus avellana HOM05D006841 ORTHO05D008607 2.2e-160 569.7 480 62.5
CAN.G707.10 Capsicum annuum HOM05D006841 ORTHO05D008607 2.9e-160 569.3 451 64.7
QL01p039597 Quercus lobata HOM05D006841 ORTHO05D008607 6.4e-160 568.2 494 60.3
TPR.G32925 Trifolium pratense HOM05D006841 ORTHO05D008607 6.4e-160 568.2 446 64.8
ClCG02G019390 Citrullus lanatus HOM05D006841 ORTHO05D008607 8.4e-160 567.8 517 58.0
Sed0019546 Sechium edule HOM05D006841 ORTHO05D008607 8.4e-160 567.8 510 57.8
Medtr3g465390 Medicago truncatula HOM05D006841 ORTHO05D008607 4.2e-159 565.5 443 64.3
VMungo0540G0160 Vigna mungo HOM05D006841 ORTHO05D008607 7.1e-159 564.7 433 65.1
EL10Ac7g15887 Beta vulgaris HOM05D006841 ORTHO05D008607 1.3e-157 560.5 451 63.2
Peaxi162Scf01324g00238 Petunia axillaris HOM05D006841 ORTHO05D008607 2.3e-157 559.7 452 62.8
AUR62009700 Chenopodium quinoa HOM05D006841 ORTHO05D008607 5.1e-157 558.5 451 63.0
THA.LOC104800754 Tarenaya hassleriana HOM05D006841 ORTHO05D008607 1.5e-156 557.0 517 58.8
Lsat_1_v5_gn_5_173260 Lactuca sativa HOM05D006841 ORTHO05D008607 4.3e-156 555.4 477 60.2
Lj2A1088G41 Lonicera japonica HOM05D006841 ORTHO05D008607 7.4e-156 554.7 448 64.7
Ah.15g096690 Amaranthus hybridus HOM05D006841 ORTHO05D008607 9.6e-156 554.3 451 62.3
AUR62036246 Chenopodium quinoa HOM05D006841 ORTHO05D008607 3.7e-155 552.4 450 62.4
Aa31LG5G6580 Aethionema arabicum HOM05D006841 ORTHO05D008607 1.8e-154 550.1 521 57.4
Hund05042 Selenicereus undatus HOM05D006841 ORTHO05D008607 2.4e-154 549.7 451 61.6
C04p58980 Brassica napus HOM05D006841 ORTHO05D008607 1.2e-153 547.4 487 58.7
AT2G30100 Arabidopsis thaliana HOM05D006841 ORTHO05D008607 2.0e-153 546.6 451 61.6
AL4G24870 Arabidopsis lyrata HOM05D006841 ORTHO05D008607 3.4e-153 545.8 450 61.8
CARHR123400 Cardamine hirsuta HOM05D006841 ORTHO05D008607 1.9e-151 540.0 477 59.1
Thhalv10016546m.g Eutrema salsugineum HOM05D006841 ORTHO05D008607 1.9e-151 540.0 451 61.2
BolC4t27410H Brassica oleracea HOM05D006841 ORTHO05D008607 2.5e-151 539.7 487 58.1
A04p22780 Brassica napus HOM05D006841 ORTHO05D008607 5.5e-151 538.5 457 60.4
BraA04t17817Z Brassica rapa HOM05D006841 ORTHO05D008607 5.5e-151 538.5 459 60.1
PSO017G2874 Papaver somniferum HOM05D006841 ORTHO05D008607 7.1e-151 538.1 520 54.4
ECA248G2088 Erigeron canadensis HOM05D006841 ORTHO05D008607 4.6e-150 535.4 408 64.0
Ah.08g215320 Amaranthus hybridus HOM05D006841 ORTHO05D008607 7.9e-150 534.6 441 60.8
Aqoxy1G01268 Aquilegia oxysepala HOM05D006841 ORTHO05D008607 1.8e-149 533.5 435 62.3
BcaC02g08056 Brassica carinata HOM05D006841 ORTHO05D008607 1.1e-148 530.8 477 58.1
Carub.0004s1120 Capsella rubella HOM05D006841 ORTHO05D008607 1.1e-148 530.8 513 56.9
Sp4g12660 Schrenkiella parvula HOM05D006841 ORTHO05D008607 1.5e-148 530.4 446 61.4
PSO349G0316 Papaver somniferum HOM05D006841 ORTHO05D008607 7.4e-148 528.1 521 53.9
Ca_14982_v3 Cicer arietinum L. HOM05D006841 ORTHO05D008607 1.0e-144 517.7 483 58.2
MBI15_g21765_MAGBIO Magnolia biondii HOM05D006841 ORTHO05D008607 2.1e-142 510.0 444 58.8
CDE06G2104 Ceratophyllum demersum HOM05D006841 ORTHO05D008607 6.9e-138 495.0 484 53.9
Cc01_g14600 Coffea canephora HOM05D006841 ORTHO05D008607 1.8e-130 470.3 399 59.9
GSVIVG01024686001 Vitis vinifera HOM05D006841 ORTHO05D008607 2.7e-126 456.4 382 60.7
ATR0174G035 Amborella trichopoda HOM05D006841 ORTHO05D008607 1.0e-125 454.5 424 55.4
Os05g0353300 Oryza sativa ssp. japonica HOM05D006841 ORTHO05D008607 2.4e-122 443.4 453 52.3
Zm00001eb286480 Zea mays HOM05D006841 ORTHO05D008607 5.9e-121 438.7 427 54.3
DCAR_007349 Daucus carota HOM05D006841 ORTHO05D008607 2.1e-118 430.3 355 59.2
AL59U10050 Arabidopsis lyrata HOM05D006841 ORTHO05D008607 2.3e-117 426.8 388 58.5
Actinidia23875 Actinidia chinensis HOM05D006841 ORTHO05D008607 2.0e-108 397.1 286 68.9
HPP92_025104 Vanilla planifolia HOM05D006841 ORTHO05D008607 1.6e-102 377.5 343 56.6
SEGI_38470 Sequoiadendron giganteum HOM05D006841 ORTHO05D008607 1.0e-101 374.8 425 44.5
Hma1.2p1_0146F.1_g065520 Hydrangea macrophylla HOM05D006841 ORTHO05D008607 1.6e-81 307.8 258 58.1
Mapoly0068s0098 Marchantia polymorpha HOM05D006841 ORTHO05D008607 6.6e-80 302.4 422 39.8
Nn2g10947 Nelumbo nucifera HOM05D006841 ORTHO05D008607 3.7e-75 286.6 201 68.7
CSS0012316 Camellia sinensis var. sinensis HOM05D006841 ORTHO05D008607 2.5e-71 273.9 424 39.6
Nn2g13216 Nelumbo nucifera HOM05D006841 ORTHO05D008607 5.6e-71 272.7 205 67.3
Cpa.g.sc2.394 Carica papaya HOM05D006841 ORTHO05D008607 9.2e-66 255.4 156 79.5
Pp3c12_8330 Physcomitrium patens HOM05D006841 ORTHO05D008607 1.2e-60 238.4 427 34.7
SMO304G0125 Selaginella moellendorffii HOM05D006841 ORTHO05D008607 5.4e-58 229.6 417 34.5
MD11G1194000 Malus domestica HOM05D006841 ORTHO05D008607 5.3e-53 213.0 155 68.4
Oeu034514.1 Olea europaea HOM05D006841 ORTHO05D008607 2.5e-34 151.0 125 60.0
Oeu034210.1 Olea europaea HOM05D009051 ORTHO05D000140 1.6e-33 148.3 170 45.9
Oeu034518.1 Olea europaea HOM05D006841 ORTHO05D008607 2.7e-33 147.5 125 59.2
AagrBONN_evm.TU.Sc2ySwM_117.787 Anthoceros agrestis HOM05D006841 ORTHO05D008607 2.3e-32 144.4 218 39.0
VMungo0331G0799 Vigna mungo HOM05D000172 ORTHO05D004529 5.1e-24 116.7 107 53.3
Oeu034517.1 Olea europaea HOM05D006841 ORTHO05D008607 1.5e-23 115.2 230 34.3
Oeu034513.1 Olea europaea HOM05D006841 ORTHO05D008607 8.5e-19 99.4 230 32.2
Oeu019495.1 Olea europaea HOM05D006841 ORTHO05D008607 2.7e-09 67.8 90 42.2


User provided reference genes

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