Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold104G30104 Striga asiatica HOM05D007336 ORTHO05D009339 7.7e-62 240.4 125 100.0
Migut.G00122 Erythranthe guttata HOM05D007336 ORTHO05D009339 1.8e-47 192.6 125 76.0
MSTRG.3884 Avicennia marina HOM05D007336 ORTHO05D009339 4.1e-47 191.4 125 74.4
SalBow2G0618 Salvia bowleyana HOM05D007336 ORTHO05D009339 8.5e-45 183.7 125 73.6
CSS0001044 Camellia sinensis var. sinensis HOM05D007336 ORTHO05D009339 2.3e-42 175.6 123 67.5
Dinv29713 Davidia involucrata HOM05D002548 ORTHO05D003031 5.2e-42 174.5 121 70.2
Cc03_g01420 Coffea canephora HOM05D007336 ORTHO05D009339 7.5e-41 170.6 125 67.2
vmacro08103 Vaccinium macrocarpon HOM05D007336 ORTHO05D009339 7.5e-41 170.6 125 64.8
Actinidia40305 Actinidia chinensis HOM05D007336 ORTHO05D009339 9.8e-41 170.2 121 66.1
Dinv44340 Davidia involucrata HOM05D007336 ORTHO05D009339 9.8e-41 170.2 121 69.4
Nitab4.5_0000306g0320 Nicotiana tabacum HOM05D007336 ORTHO05D009339 2.8e-40 168.7 118 67.8
Rhsim04G0227800 Rhododendron simsii HOM05D007336 ORTHO05D009339 3.7e-40 168.3 125 63.2
Sc19g0005520 Simmondsia chinensis HOM05D007336 ORTHO05D009339 4.1e-39 164.9 118 69.5
Duzib128G0390 Durio zibethinus HOM05D007336 ORTHO05D009339 1.2e-38 163.3 126 64.3
GSVIVG01031156001 Vitis vinifera HOM05D007336 ORTHO05D009339 1.2e-38 163.3 126 63.5
PGSC0003DMG400006241 Solanum tuberosum HOM05D007336 ORTHO05D009339 1.6e-38 162.9 113 68.1
Thecc.05G317300 Theobroma cacao HOM05D007336 ORTHO05D009339 5.9e-38 161.0 126 64.3
Aqoxy2G02873 Aquilegia oxysepala HOM05D007336 ORTHO05D009339 7.7e-38 160.6 124 66.1
AUR62018066 Chenopodium quinoa HOM05D007336 ORTHO05D009339 1.0e-37 160.2 118 68.6
AUR62015269 Chenopodium quinoa HOM05D007336 ORTHO05D009339 2.3e-37 159.1 121 66.1
COL.COLO4_03798 Corchorus olitorius HOM05D007336 ORTHO05D009339 2.3e-37 159.1 126 61.1
CAN.G14.12 Capsicum annuum HOM05D007336 ORTHO05D009339 5.0e-37 157.9 113 68.1
Peaxi162Scf00065g01021 Petunia axillaris HOM05D007336 ORTHO05D009339 6.5e-37 157.5 118 63.6
Nitab4.5_0002755g0010 Nicotiana tabacum HOM05D007336 ORTHO05D009339 8.6e-37 157.1 135 58.5
Cfa006663 Carpinus fangiana HOM05D007336 ORTHO05D009339 1.5e-36 156.4 122 62.3
TAR362G0973 Trochodendron aralioides HOM05D007336 ORTHO05D009339 1.5e-36 156.4 124 62.1
FvH4_6g06960 Fragaria vesca HOM05D007336 ORTHO05D009339 1.9e-36 156.0 126 62.7
FAN05G1709 Fragaria x ananassa HOM05D007336 ORTHO05D009339 2.5e-36 155.6 126 61.9
FAN05G3591 Fragaria x ananassa HOM05D007336 ORTHO05D009339 2.5e-36 155.6 126 61.9
RcHm_v2.0_Chr3g0456501 Rosa chinensis HOM05D007336 ORTHO05D009339 2.5e-36 155.6 126 63.5
Potri.005G021800 Populus trichocarpa HOM05D007336 ORTHO05D009339 3.3e-36 155.2 122 62.3
EL10Ac3g06656 Beta vulgaris HOM05D007336 ORTHO05D009339 7.2e-36 154.1 121 62.0
DCAR_030493 Daucus carota HOM05D007336 ORTHO05D009339 7.2e-36 154.1 123 61.0
Gorai.007G303000 Gossypium raimondii HOM05D007336 ORTHO05D009339 7.2e-36 154.1 126 61.9
Lsat_1_v5_gn_6_76001 Lactuca sativa HOM05D007336 ORTHO05D009339 7.2e-36 154.1 120 60.8
Solyc01g065710.3 Solanum lycopersicum HOM05D007336 ORTHO05D009339 9.5e-36 153.7 113 65.5
Sopen01g027110 Solanum pennellii HOM05D007336 ORTHO05D009339 9.5e-36 153.7 113 65.5
Atru.chr1.2192 Acer truncatum HOM05D007336 ORTHO05D009339 1.6e-35 152.9 124 62.9
FAN09G1805 Fragaria x ananassa HOM05D007336 ORTHO05D009339 2.1e-35 152.5 126 61.9
FAN14G5314 Fragaria x ananassa HOM05D007336 ORTHO05D009339 2.1e-35 152.5 126 61.9
Manes.01G127100 Manihot esculenta HOM05D007336 ORTHO05D009339 2.8e-35 152.1 124 59.7
Ciclev10002848m.g Citrus clementina HOM05D007336 ORTHO05D009339 3.6e-35 151.8 126 61.1
Gohir.D11G280800 Gossypium hirsutum HOM05D007336 ORTHO05D009339 4.7e-35 151.4 126 61.1
MD12G1210100 Malus domestica HOM05D007336 ORTHO05D009339 8.0e-35 150.6 126 59.5
Atru.chr1.2191 Acer truncatum HOM05D007336 ORTHO05D009339 1.4e-34 149.8 124 62.1
Prupe.6G317700 Prunus persica HOM05D007336 ORTHO05D009339 1.4e-34 149.8 123 61.0
CsaV3_2G006800 Cucumis sativus L. HOM05D007336 ORTHO05D009339 1.8e-34 149.4 125 61.6
CiPaw.08G158700 Carya illinoinensis HOM05D007336 ORTHO05D009339 2.3e-34 149.1 122 59.8
MD04G1197300 Malus domestica HOM05D007336 ORTHO05D009339 3.0e-34 148.7 126 58.7
CANSAT54G2288 Cannabis sativa HOM05D007336 ORTHO05D009339 4.0e-34 148.3 118 61.0
MELO3C004210.2 Cucumis melo HOM05D007336 ORTHO05D009339 4.0e-34 148.3 125 60.8
FAN02G4454 Fragaria x ananassa HOM05D007336 ORTHO05D009339 4.0e-34 148.3 136 58.8
PGR031G1948 Punica granatum HOM05D007336 ORTHO05D009339 6.8e-34 147.5 123 61.0
THA.LOC104805904 Tarenaya hassleriana HOM05D007336 ORTHO05D009339 6.8e-34 147.5 120 60.0
Hund20531 Selenicereus undatus HOM05D007336 ORTHO05D009339 8.9e-34 147.1 118 61.9
ClCG02G015210 Citrullus lanatus HOM05D007336 ORTHO05D009339 2.0e-33 146.0 125 59.2
Eucgr.H03266 Eucalyptus grandis HOM05D007336 ORTHO05D009339 7.5e-33 144.1 125 59.2
Psat0s3672g0040 Pisum sativum HOM05D007336 ORTHO05D009339 7.5e-33 144.1 126 55.6
Lalb_Chr16g0391581 Lupinus albus HOM05D007336 ORTHO05D009339 9.8e-33 143.7 126 57.1
Lj1g0024848 Lotus japonicus HOM05D007336 ORTHO05D009339 3.7e-32 141.7 126 55.6
Glyma.19G230700 Glycine max HOM05D007336 ORTHO05D009339 8.3e-32 140.6 122 55.7
Thhalv10023757m.g Eutrema salsugineum HOM05D007336 ORTHO05D009339 1.1e-31 140.2 121 56.2
arahy.Tifrunner.gnm1.ann1.N7WCQ3 Arachis hypogaea HOM05D000001 ORTHO05D010781 1.4e-31 139.8 123 61.0
Eucgr.H03264 Eucalyptus grandis HOM05D007336 ORTHO05D009339 1.8e-31 139.4 125 57.6
arahy.Tifrunner.gnm1.ann1.63GRQU Arachis hypogaea HOM05D007336 ORTHO05D010781 2.4e-31 139.0 123 60.2
AL1G65880 Arabidopsis lyrata HOM05D007336 ORTHO05D009339 5.4e-31 137.9 122 58.2
CDE02G0601 Ceratophyllum demersum HOM05D007336 ORTHO05D009339 5.4e-31 137.9 122 57.4
unitig_46.g18696 Utricularia gibba HOM05D007336 ORTHO05D009339 5.4e-31 137.9 113 60.2
Aa31LG2G11600 Aethionema arabicum HOM05D007336 ORTHO05D009339 1.2e-30 136.7 121 57.0
HPP92_013733 Vanilla planifolia HOM05D007336 ORTHO05D009339 2.7e-30 135.6 118 59.3
BcaB04g20156 Brassica carinata HOM05D007336 ORTHO05D009339 3.5e-30 135.2 121 56.2
CARHR289820 Cardamine hirsuta HOM05D007336 ORTHO05D009339 3.5e-30 135.2 122 56.6
A01p27330 Brassica napus HOM05D007336 ORTHO05D009339 4.5e-30 134.8 116 57.8
C01p35170 Brassica napus HOM05D007336 ORTHO05D009339 4.5e-30 134.8 116 57.8
BolC1t03475H Brassica oleracea HOM05D007336 ORTHO05D009339 4.5e-30 134.8 116 57.8
BraA01t02872Z Brassica rapa HOM05D007336 ORTHO05D009339 4.5e-30 134.8 116 57.8
Haze_04108 Corylus avellana HOM05D002548 ORTHO05D003031 4.5e-30 134.8 160 46.9
Phvul.001G227200 Phaseolus vulgaris HOM05D007336 ORTHO05D009339 4.5e-30 134.8 123 54.5
AT1G56260 Arabidopsis thaliana HOM05D007336 ORTHO05D009339 7.8e-30 134.0 123 56.9
Gohir.A11G270600 Gossypium hirsutum HOM05D007336 ORTHO05D009339 3.8e-29 131.7 99 68.7
Carub.0002s0790 Capsella rubella HOM05D007336 ORTHO05D009339 6.6e-29 131.0 125 55.2
Sp2g06650 Schrenkiella parvula HOM05D007336 ORTHO05D009339 3.3e-28 128.6 121 53.7
SEGI_32823 Sequoiadendron giganteum HOM05D007336 ORTHO05D009339 4.3e-28 128.3 124 51.6
Medtr7g112530 Medicago truncatula HOM05D007336 ORTHO05D009339 1.2e-27 126.7 126 50.8
BcaC09g49567 Brassica carinata HOM05D007336 ORTHO05D009339 2.1e-27 125.9 116 56.0
MBI18_g25083_MAGBIO Magnolia biondii HOM05D007336 ORTHO05D009339 2.8e-27 125.6 154 47.4
Zm00001eb300400 Zea mays HOM05D007336 ORTHO05D009339 3.6e-27 125.2 126 53.2
HanXRQChr13g0413951 Helianthus annuus HOM05D007336 ORTHO05D009339 6.1e-27 124.4 86 67.4
PSO832G0037 Papaver somniferum HOM05D007336 ORTHO05D009339 1.0e-26 123.6 120 50.8
TPR.G39916 Trifolium pratense HOM05D007336 ORTHO05D009339 1.0e-26 123.6 126 50.0
Ah.04g153680 Amaranthus hybridus HOM05D007336 ORTHO05D009339 4.1e-23 111.7 93 59.1
Oeu031988.1 Olea europaea HOM05D007336 ORTHO05D009339 5.4e-23 111.3 85 61.2
QL03p019121 Quercus lobata HOM05D007336 ORTHO05D009339 5.4e-23 111.3 88 59.1
Cpa.g.sc48.123 Carica papaya HOM05D007336 ORTHO05D009339 7.0e-23 110.9 205 38.0
Nn4g25729 Nelumbo nucifera HOM05D007336 ORTHO05D009339 1.2e-22 110.2 86 66.3
Sed0016582 Sechium edule HOM05D007336 ORTHO05D009339 2.0e-22 109.4 90 57.8
ATR0693G059 Amborella trichopoda HOM05D007336 ORTHO05D009339 2.7e-22 109.0 88 60.2
Eucgr.H03263 Eucalyptus grandis HOM05D007336 ORTHO05D009339 2.7e-22 109.0 92 60.9
Prupe.2G221300 Prunus persica HOM05D007336 ORTHO05D009339 4.6e-22 108.2 95 54.7
Eucgr.H03265 Eucalyptus grandis HOM05D007336 ORTHO05D009339 1.0e-21 107.1 92 59.8
Eucgr.L02901 Eucalyptus grandis HOM05D007336 ORTHO05D009339 1.0e-21 107.1 92 59.8
Pp3c22_13440 Physcomitrium patens HOM05D007336 ORTHO05D009339 3.0e-21 105.5 115 47.0
AagrBONN_evm.TU.Sc2ySwM_344.3688 Anthoceros agrestis HOM05D007336 ORTHO05D009339 2.5e-20 102.4 117 48.7
VMungo1383G0834 Vigna mungo HOM05D007336 ORTHO05D009339 1.1e-18 97.1 88 51.1
SMO137G0008 Selaginella moellendorffii HOM05D007336 ORTHO05D009339 6.8e-18 94.4 110 50.0
Glyma.03G233600 Glycine max HOM05D007336 ORTHO05D009339 6.4e-16 87.8 82 53.7
Prupe.3G209800 Prunus persica HOM05D007336 ORTHO05D009339 8.3e-16 87.4 108 46.3
Mapoly0064s0018 Marchantia polymorpha HOM05D007336 ORTHO05D009339 7.5e-09 64.3 78 43.6


User provided reference genes

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