Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold1040G53805 Striga asiatica HOM05D005447 ORTHO05D006730 3.2e-153 545.0 270 100.0
Migut.A00152 Erythranthe guttata HOM05D005447 ORTHO05D006730 2.1e-120 436.0 272 79.4
SalBow4G2766 Salvia bowleyana HOM05D005447 ORTHO05D006730 7.8e-120 434.1 266 78.6
MSTRG.11670 Avicennia marina HOM05D005447 ORTHO05D006730 8.1e-117 424.1 268 76.5
unitig_748.g8015 Utricularia gibba HOM05D005447 ORTHO05D006730 5.4e-105 384.8 264 70.1
Dinv27967 Davidia involucrata HOM05D005447 ORTHO05D006730 8.7e-103 377.5 259 69.5
Sopen12g031820 Solanum pennellii HOM05D005447 ORTHO05D006730 1.9e-102 376.3 260 71.2
CSS0008615 Camellia sinensis var. sinensis HOM05D005447 ORTHO05D006730 4.3e-102 375.2 245 71.8
Solyc12g095920.2 Solanum lycopersicum HOM05D005447 ORTHO05D006730 1.6e-101 373.2 260 70.8
Cc08_g10370 Coffea canephora HOM05D005447 ORTHO05D006730 1.1e-100 370.5 243 71.2
Lsat_1_v5_gn_6_7400 Lactuca sativa HOM05D005447 ORTHO05D006730 3.1e-100 369.0 241 72.6
Nitab4.5_0000738g0170 Nicotiana tabacum HOM05D005447 ORTHO05D006730 6.9e-100 367.9 250 70.0
PGSC0003DMG400029302 Solanum tuberosum HOM05D005447 ORTHO05D006730 1.5e-99 366.7 260 70.4
Peaxi162Scf00064g01636 Petunia axillaris HOM05D005447 ORTHO05D006730 2.6e-99 365.9 243 72.0
HanXRQChr09g0251181 Helianthus annuus HOM05D005447 ORTHO05D006730 4.5e-99 365.2 260 69.2
Lju3103C0G11 Lonicera japonica HOM05D005447 ORTHO05D006730 2.2e-98 362.8 274 66.1
Actinidia30302 Actinidia chinensis HOM05D005447 ORTHO05D006730 2.9e-98 362.5 242 72.3
Hma1.2p1_1213F.1_g267530 Hydrangea macrophylla HOM05D005447 ORTHO05D006730 2.9e-98 362.5 265 66.8
Peaxi162Scf00436g00831 Petunia axillaris HOM05D005447 ORTHO05D006730 4.9e-98 361.7 250 70.0
Hma1.2p1_2708F.1_g327220 Hydrangea macrophylla HOM05D005447 ORTHO05D006730 8.4e-98 360.9 265 66.4
Prupe.1G414700 Prunus persica HOM05D005447 ORTHO05D006730 1.1e-97 360.5 257 69.3
EL10Ac2g03925 Beta vulgaris HOM05D005447 ORTHO05D006730 3.2e-97 359.0 250 67.6
ECA233G2666 Erigeron canadensis HOM05D005447 ORTHO05D006730 3.2e-97 359.0 253 70.8
CSS0040006 Camellia sinensis var. sinensis HOM05D005447 ORTHO05D006730 9.3e-97 357.5 262 66.4
Cfa017935 Carpinus fangiana HOM05D005447 ORTHO05D006730 1.2e-96 357.1 250 69.2
vmacro00161 Vaccinium macrocarpon HOM05D005447 ORTHO05D006730 1.2e-96 357.1 264 66.3
Nitab4.5_0011306g0050 Nicotiana tabacum HOM05D005447 ORTHO05D006730 5.1e-95 351.7 261 66.7
Cpa.g.sc7.194 Carica papaya HOM05D005447 ORTHO05D006730 6.7e-95 351.3 238 70.2
Ciclev10009241m.g Citrus clementina HOM05D005447 ORTHO05D006730 6.7e-95 351.3 257 67.3
Hma1.2p1_1944F.1_g308590 Hydrangea macrophylla HOM05D005447 ORTHO05D006730 8.7e-95 350.9 264 67.4
Hund03355 Selenicereus undatus HOM05D005447 ORTHO05D006730 2.5e-94 349.4 246 67.1
MD08G1073300 Malus domestica HOM05D005447 ORTHO05D006730 3.3e-94 349.0 256 67.6
Eucgr.C03005 Eucalyptus grandis HOM05D005447 ORTHO05D006730 4.3e-94 348.6 242 68.2
CiPaw.16G030000 Carya illinoinensis HOM05D005447 ORTHO05D006730 1.6e-93 346.7 251 67.3
TAR626G0638 Trochodendron aralioides HOM05D005447 ORTHO05D006730 3.7e-93 345.5 237 70.5
TWI34G1470 Tripterygium wilfordii HOM05D005447 ORTHO05D006730 4.8e-93 345.1 250 68.0
Hma1.2p1_0482F.1_g162683 Hydrangea macrophylla HOM05D005447 ORTHO05D006730 8.2e-93 344.4 236 71.6
Atru.chr7.2018 Acer truncatum HOM05D005447 ORTHO05D006730 1.4e-92 343.6 270 64.4
RcHm_v2.0_Chr6g0310521 Rosa chinensis HOM05D005447 ORTHO05D006730 5.3e-92 341.7 250 67.2
QL02p001555 Quercus lobata HOM05D005447 ORTHO05D006730 2.0e-91 339.7 242 68.2
Nn8g38949 Nelumbo nucifera HOM05D005447 ORTHO05D006730 5.0e-90 335.1 263 62.7
Sc06g0000920 Simmondsia chinensis HOM05D005447 ORTHO05D006730 8.4e-90 334.3 239 65.7
Sabra18G0050000 Salix brachista HOM05D005447 ORTHO05D006730 1.1e-89 334.0 242 66.5
AUR62022047 Chenopodium quinoa HOM05D005447 ORTHO05D006730 1.4e-89 333.6 250 65.6
Lalb_Chr08g0245101 Lupinus albus HOM05D005447 ORTHO05D006730 1.4e-89 333.6 250 64.8
Manes.16G078100 Manihot esculenta HOM05D005447 ORTHO05D006730 2.5e-89 332.8 246 65.9
arahy.Tifrunner.gnm1.ann1.PT16FZ Arachis hypogaea HOM05D005447 ORTHO05D006730 4.2e-89 332.0 261 64.4
DCAR_004445 Daucus carota HOM05D005447 ORTHO05D006730 4.2e-89 332.0 249 64.3
Potri.018G061800 Populus trichocarpa HOM05D005447 ORTHO05D006730 4.2e-89 332.0 244 66.0
arahy.Tifrunner.gnm1.ann1.H6GXLW Arachis hypogaea HOM05D005447 ORTHO05D006730 7.1e-89 331.3 261 64.0
C07p59440 Brassica napus HOM05D005447 ORTHO05D006730 7.1e-89 331.3 247 64.8
BolC7t46387H Brassica oleracea HOM05D005447 ORTHO05D006730 7.1e-89 331.3 247 64.8
Lj1g0020487 Lotus japonicus HOM05D005447 ORTHO05D006730 9.3e-89 330.9 247 63.6
Prupe.6G150100 Prunus persica HOM05D005447 ORTHO05D006730 1.2e-88 330.5 257 64.6
CANSAT25G3707 Cannabis sativa HOM05D005447 ORTHO05D006730 4.6e-88 328.6 249 64.3
Psat5g036560 Pisum sativum HOM05D005447 ORTHO05D006730 4.6e-88 328.6 258 62.4
PSO063G2264 Papaver somniferum HOM05D005447 ORTHO05D006730 7.9e-88 327.8 244 66.0
CsaV3_4G035510 Cucumis sativus L. HOM05D005447 ORTHO05D006730 1.0e-87 327.4 251 62.5
PGR044G0161 Punica granatum HOM05D005447 ORTHO05D006730 1.8e-87 326.6 252 65.1
Sed0025565 Sechium edule HOM05D005447 ORTHO05D006730 1.8e-87 326.6 243 64.2
MELO3C016858.2 Cucumis melo HOM05D005447 ORTHO05D006730 5.1e-87 325.1 232 64.7
FvH4_2g32160 Fragaria vesca HOM05D005447 ORTHO05D006730 5.1e-87 325.1 248 64.1
Phvul.009G076500 Phaseolus vulgaris HOM05D005447 ORTHO05D006730 5.1e-87 325.1 254 63.8
A03p61720 Brassica napus HOM05D005447 ORTHO05D006730 6.7e-87 324.7 247 63.6
DCAR_004444 Daucus carota HOM05D005447 ORTHO05D006730 8.7e-87 324.3 241 62.7
BraA03t15210Z Brassica rapa HOM05D005447 ORTHO05D006730 1.1e-86 323.9 247 63.6
FAN27G1388 Fragaria x ananassa HOM05D005447 ORTHO05D006730 1.1e-86 323.9 248 63.7
PSO832G2924 Papaver somniferum HOM05D005447 ORTHO05D006730 1.1e-86 323.9 252 63.9
VMungo1309G1567 Vigna mungo HOM05D005447 ORTHO05D006730 1.5e-86 323.6 239 66.1
Medtr3g081440 Medicago truncatula HOM05D005447 ORTHO05D006730 7.4e-86 321.2 243 63.8
Carub.0007s0752 Capsella rubella HOM05D005447 ORTHO05D006730 9.7e-86 320.9 245 63.3
Thecc.09G051400 Theobroma cacao HOM05D005447 ORTHO05D006730 9.7e-86 320.9 254 65.4
AL7G18730 Arabidopsis lyrata HOM05D005447 ORTHO05D006730 1.6e-85 320.1 245 62.4
BcaNung02148 Brassica carinata HOM05D005447 ORTHO05D006730 2.2e-85 319.7 245 63.7
Gorai.009G046500 Gossypium raimondii HOM05D005447 ORTHO05D006730 2.2e-85 319.7 246 66.3
AT4G32960 Arabidopsis thaliana HOM05D005447 ORTHO05D006730 4.8e-85 318.5 244 62.7
Ca_15869_v3 Cicer arietinum L. HOM05D005447 ORTHO05D006730 4.8e-85 318.5 237 64.1
Duzib187G1160 Durio zibethinus HOM05D005447 ORTHO05D006730 4.8e-85 318.5 254 65.4
Gohir.D05G045300 Gossypium hirsutum HOM05D005447 ORTHO05D006730 4.8e-85 318.5 246 65.9
Sp7g30740 Schrenkiella parvula HOM05D005447 ORTHO05D006730 4.8e-85 318.5 245 62.9
Duzib168G1543 Durio zibethinus HOM05D005447 ORTHO05D006730 6.3e-85 318.2 247 65.6
Gohir.A05G043700 Gossypium hirsutum HOM05D005447 ORTHO05D006730 6.3e-85 318.2 246 65.9
THA.LOC104803734 Tarenaya hassleriana HOM05D005447 ORTHO05D006730 1.4e-84 317.0 239 64.4
Thhalv10025994m.g Eutrema salsugineum HOM05D005447 ORTHO05D006730 5.3e-84 315.1 242 61.6
CARHR240980 Cardamine hirsuta HOM05D005447 ORTHO05D006730 1.5e-83 313.5 244 61.1
Glyma.06G051000 Glycine max HOM05D005447 ORTHO05D006730 1.5e-83 313.5 266 60.2
HPP92_026778 Vanilla planifolia HOM05D005447 ORTHO05D006730 1.5e-83 313.5 228 65.8
Aqoxy6G02809 Aquilegia oxysepala HOM05D005447 ORTHO05D006730 2.9e-82 309.3 243 59.7
Aqoxy7G03929 Aquilegia oxysepala HOM05D005447 ORTHO05D006730 2.9e-82 309.3 243 59.7
Lj7C280G4 Lonicera japonica HOM05D005447 ORTHO05D006730 6.5e-82 308.1 274 58.8
Aa31sc248G10 Aethionema arabicum HOM05D005447 ORTHO05D006730 1.9e-81 306.6 245 60.8
Psat5g106840 Pisum sativum HOM05D005447 ORTHO05D006730 4.6e-80 302.0 248 60.1
AUR62009180 Chenopodium quinoa HOM05D005447 ORTHO05D006730 6.7e-79 298.1 219 67.6
ATR0789G081 Amborella trichopoda HOM05D005447 ORTHO05D006730 1.3e-77 293.9 251 56.6
COL.COLO4_21030 Corchorus olitorius HOM05D005447 ORTHO05D006730 3.7e-77 292.4 248 60.5
THA.LOC104818575 Tarenaya hassleriana HOM05D005447 ORTHO05D006730 7.9e-72 274.6 240 57.1
Carub.0007s0751 Capsella rubella HOM05D005447 ORTHO05D006730 8.8e-71 271.2 222 59.5
Os06g0150100 Oryza sativa ssp. japonica HOM05D005447 ORTHO05D006730 4.4e-70 268.9 282 48.6
CARHR240970 Cardamine hirsuta HOM05D005447 ORTHO05D006730 1.3e-69 267.3 228 58.8
AT4G32970 Arabidopsis thaliana HOM05D005447 ORTHO05D006730 2.2e-69 266.5 230 57.8
AL7G18720 Arabidopsis lyrata HOM05D005447 ORTHO05D006730 2.8e-69 266.2 222 59.5
Ah.11g044670 Amaranthus hybridus HOM05D005447 ORTHO05D006730 4.1e-68 262.3 248 54.0
Oeu057690.3 Olea europaea HOM05D005447 ORTHO05D006730 4.1e-68 262.3 170 74.7
Nitab4.5_0001179g0010 Nicotiana tabacum HOM05D005447 ORTHO05D006730 4.2e-65 252.3 168 72.6
AUR62022045 Chenopodium quinoa HOM05D005447 ORTHO05D006730 5.5e-65 251.9 170 71.2
Zm00001eb270840 Zea mays HOM05D005447 ORTHO05D006730 3.0e-63 246.1 271 46.5
Haze_18213 Corylus avellana HOM05D005447 ORTHO05D006730 4.0e-63 245.7 168 71.4
SEGI_08476 Sequoiadendron giganteum HOM05D005447 ORTHO05D006730 8.2e-61 238.0 207 53.6
Pp3c6_24590 Physcomitrium patens HOM05D005447 ORTHO05D006730 7.0e-60 235.0 219 53.0
CDE04G0748 Ceratophyllum demersum HOM05D005447 ORTHO05D006730 3.5e-59 232.6 176 62.5
Mapoly0129s0035 Marchantia polymorpha HOM05D005447 ORTHO05D006730 1.8e-55 220.3 220 49.1
ClCG05G017740 Citrullus lanatus HOM05D005447 ORTHO05D006730 2.7e-51 206.5 159 61.6
Oeu036349.1 Olea europaea HOM05D005447 ORTHO05D006730 5.9e-51 205.3 151 72.2
SMO367G0921 Selaginella moellendorffii HOM05D005447 ORTHO05D006730 2.5e-49 199.9 217 46.1
FAN15G0839 Fragaria x ananassa HOM05D005447 ORTHO05D006730 1.2e-48 197.6 146 63.7
AUR62009181 Chenopodium quinoa HOM05D005447 ORTHO05D006730 2.1e-48 196.8 136 69.9
CBR_g6395 Chara braunii HOM05D005447 ORTHO05D006730 2.3e-47 193.4 240 43.3
Nitab4.5_0000359g0050 Nicotiana tabacum HOM05D006502 ORTHO05D006730 1.5e-46 190.7 115 77.4
Eucgr.C03947 Eucalyptus grandis HOM05D005447 ORTHO05D006730 9.8e-46 188.0 132 67.4
MSTRG.25940 Avicennia marina HOM05D005447 ORTHO05D006730 1.0e-42 177.9 107 74.8
FAN24G0255 Fragaria x ananassa HOM05D005447 ORTHO05D006730 6.1e-40 168.7 134 64.2
FAN20G2744 Fragaria x ananassa HOM05D005447 ORTHO05D006730 1.5e-38 164.1 134 62.7
AagrBONN_evm.TU.Sc2ySwM_344.4531 Anthoceros agrestis HOM05D005447 ORTHO05D006730 7.5e-38 161.8 171 47.4
VMungo0251G2120 Vigna mungo HOM05D005447 ORTHO05D006730 5.2e-31 139.0 136 50.0
GSVIVG01035346001 Vitis vinifera HOM05D005447 ORTHO05D006730 5.2e-31 139.0 91 78.0
Actinidia01202 Actinidia chinensis HOM05D005447 ORTHO05D006730 4.9e-29 132.5 102 62.7
VMungo0540G0355 Vigna mungo HOM05D005447 ORTHO05D006730 9.2e-28 128.3 105 58.1
SEGI_23140 Sequoiadendron giganteum HOM05D005447 ORTHO05D006730 3.5e-27 126.3 127 50.4
AUR62025497 Chenopodium quinoa HOM05D005447 ORTHO05D006730 1.1e-23 114.8 83 62.7
AUR62022046 Chenopodium quinoa HOM05D005447 ORTHO05D006730 3.4e-22 109.8 250 32.0
TPR.G36227 Trifolium pratense HOM05D005447 ORTHO05D006730 7.5e-22 108.6 96 55.2
C01p05700 Brassica napus HOM05D005447 ORTHO05D006730 3.9e-18 96.3 98 53.1
BolC1t00551H Brassica oleracea HOM05D005447 ORTHO05D006730 3.9e-18 96.3 98 53.1
SHI18783 Sapria himalayana HOM05D005447 ORTHO05D006730 5.6e-17 92.4 75 56.0
Cre13.g604850 Chlamydomonas reinhardtii HOM05D005447 ORTHO05D006730 1.8e-15 87.4 252 29.0
Gorai.010G105200 Gossypium raimondii HOM05D005447 ORTHO05D006730 4.7e-08 62.8 65 49.2
Gohir.D06G091250 Gossypium hirsutum HOM05D005447 ORTHO05D006730 5.2e-07 59.3 65 47.7
Gohir.D06G091325 Gossypium hirsutum HOM05D005447 ORTHO05D006730 5.2e-07 59.3 65 47.7


User provided reference genes

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