Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold103G30048 Striga asiatica HOM05D005768 ORTHO05D007100 1.5e-175 619.4 309 100.0
Migut.A00171 Erythranthe guttata HOM05D005768 ORTHO05D007100 2.2e-65 253.4 166 75.3
SalBow6G5216 Salvia bowleyana HOM05D005768 ORTHO05D007100 2.7e-63 246.5 166 73.5
Cc00_g09250 Coffea canephora HOM05D005768 ORTHO05D007100 2.2e-57 226.9 179 62.6
MSTRG.25924 Avicennia marina HOM05D005768 ORTHO05D007100 4.1e-56 222.6 166 68.1
GSVIVG01035325001 Vitis vinifera HOM05D005768 ORTHO05D007100 1.0e-54 218.0 166 65.1
Nitab4.5_0000318g0060 Nicotiana tabacum HOM05D005768 ORTHO05D007100 1.7e-54 217.2 182 58.2
Dinv27944 Davidia involucrata HOM05D005768 ORTHO05D007100 5.0e-54 215.7 166 66.3
Atru.chr7.2675 Acer truncatum HOM05D005768 ORTHO05D007100 1.2e-52 211.1 166 65.1
RcHm_v2.0_Chr6g0306801 Rosa chinensis HOM05D005768 ORTHO05D007100 2.7e-52 209.9 148 70.3
Solyc08g066030.3 Solanum lycopersicum HOM05D005768 ORTHO05D007100 3.6e-52 209.5 167 62.3
Sopen08g019690 Solanum pennellii HOM05D005768 ORTHO05D007100 3.6e-52 209.5 167 62.3
AUR62017359 Chenopodium quinoa HOM05D005768 ORTHO05D007100 4.7e-52 209.1 149 68.5
PGSC0003DMG401025462 Solanum tuberosum HOM05D005768 ORTHO05D007100 8.0e-52 208.4 167 62.3
Peaxi162Scf00699g00655 Petunia axillaris HOM05D005768 ORTHO05D007100 1.0e-51 208.0 163 62.0
Ciclev10022280m.g Citrus clementina HOM05D005768 ORTHO05D007100 1.8e-51 207.2 166 60.2
Atru.chr4.1221 Acer truncatum HOM05D005768 ORTHO05D007100 2.3e-51 206.8 166 62.7
Manes.02G043100 Manihot esculenta HOM05D005768 ORTHO05D007100 2.3e-51 206.8 166 62.0
Ah.02g116310 Amaranthus hybridus HOM05D005768 ORTHO05D007100 5.2e-51 205.7 177 57.6
Aqoxy5G03966 Aquilegia oxysepala HOM05D005768 ORTHO05D007100 5.2e-51 205.7 164 62.8
CSS0002565 Camellia sinensis var. sinensis HOM05D005768 ORTHO05D007100 5.2e-51 205.7 166 63.3
EL10Ac5g12654 Beta vulgaris HOM05D005768 ORTHO05D007100 6.8e-51 205.3 150 66.0
AUR62010536 Chenopodium quinoa HOM05D005768 ORTHO05D007100 6.8e-51 205.3 149 66.4
Prupe.1G443600 Prunus persica HOM05D005768 ORTHO05D007100 6.8e-51 205.3 148 69.6
CiPaw.07G201500 Carya illinoinensis HOM05D005768 ORTHO05D007100 1.2e-50 204.5 150 68.0
Eucgr.C02988 Eucalyptus grandis HOM05D005768 ORTHO05D007100 1.5e-50 204.1 166 63.3
FAN20G2834 Fragaria x ananassa HOM05D005768 ORTHO05D007100 1.5e-50 204.1 148 68.2
MD08G1109000 Malus domestica HOM05D005768 ORTHO05D007100 2.0e-50 203.8 149 69.1
Hma1.2p1_0442F.1_g153950 Hydrangea macrophylla HOM05D005768 ORTHO05D007100 7.5e-50 201.8 180 57.8
TWI63G1351 Tripterygium wilfordii HOM05D005768 ORTHO05D007100 1.7e-49 200.7 149 62.4
Actinidia18208 Actinidia chinensis HOM05D005768 ORTHO05D007100 2.8e-49 199.9 195 55.4
PGR044G0118 Punica granatum HOM05D005768 ORTHO05D007100 6.3e-49 198.7 172 56.4
FAN27G1715 Fragaria x ananassa HOM05D005768 ORTHO05D007100 8.3e-49 198.4 148 67.6
Gohir.D07G024000 Gossypium hirsutum HOM05D005768 ORTHO05D007100 1.1e-48 198.0 151 63.6
Gorai.001G024700 Gossypium raimondii HOM05D005768 ORTHO05D007100 1.1e-48 198.0 151 63.6
Cpa.g.sc1868.1 Carica papaya HOM05D005768 ORTHO05D007100 3.1e-48 196.4 166 60.8
CANSAT56G2391 Cannabis sativa HOM05D005768 ORTHO05D007100 7.0e-48 195.3 166 59.6
COL.COLO4_21009 Corchorus olitorius HOM05D005768 ORTHO05D007100 9.2e-48 194.9 148 64.2
HanXRQChr03g0078001 Helianthus annuus HOM05D005768 ORTHO05D007100 9.2e-48 194.9 144 66.0
Thecc.09G049100 Theobroma cacao HOM05D005768 ORTHO05D007100 9.2e-48 194.9 148 64.9
Nitab4.5_0002021g0070 Nicotiana tabacum HOM05D005768 ORTHO05D007100 1.2e-47 194.5 144 65.3
Sabra06G0183200 Salix brachista HOM05D005768 ORTHO05D007100 1.2e-47 194.5 167 61.7
Sc09g0009490 Simmondsia chinensis HOM05D005768 ORTHO05D007100 1.2e-47 194.5 199 53.8
TPR.G33208 Trifolium pratense HOM05D005768 ORTHO05D007100 1.2e-47 194.5 167 62.3
Haze_01966 Corylus avellana HOM05D005768 ORTHO05D007100 1.6e-47 194.1 155 61.9
Duzib168G0475 Durio zibethinus HOM05D005768 ORTHO05D007100 2.0e-47 193.7 148 62.8
TWI34G0524 Tripterygium wilfordii HOM05D005768 ORTHO05D007100 2.0e-47 193.7 150 61.3
TAR383G0888 Trochodendron aralioides HOM05D005768 ORTHO05D007100 2.0e-47 193.7 148 66.2
Hma1.2p1_0603F.1_g187720 Hydrangea macrophylla HOM05D005768 ORTHO05D007100 3.5e-47 193.0 148 64.2
Potri.006G234800 Populus trichocarpa HOM05D005768 ORTHO05D007100 3.5e-47 193.0 167 61.1
TPR.G29192 Trifolium pratense HOM05D005768 ORTHO05D007100 1.0e-46 191.4 167 61.7
PSO832G3354 Papaver somniferum HOM05D005768 ORTHO05D007100 2.3e-46 190.3 175 57.7
Glyma.19G233100 Glycine max HOM05D005768 ORTHO05D007100 5.0e-46 189.1 150 64.7
TAR624G0371 Trochodendron aralioides HOM05D005768 ORTHO05D007100 6.6e-46 188.7 166 59.0
PSO063G0290 Papaver somniferum HOM05D005768 ORTHO05D007100 8.6e-46 188.3 155 63.9
Lsat_1_v5_gn_3_56860 Lactuca sativa HOM05D005768 ORTHO05D007100 1.1e-45 188.0 148 62.8
Psat0s1830g0160 Pisum sativum HOM05D005768 ORTHO05D007100 1.1e-45 188.0 167 61.1
Medtr7g112710 Medicago truncatula HOM05D005768 ORTHO05D007100 1.9e-45 187.2 166 61.4
unitig_0.g2567 Utricularia gibba HOM05D005768 ORTHO05D007100 2.5e-45 186.8 128 65.6
Gohir.A07G022184 Gossypium hirsutum HOM05D005768 ORTHO05D007100 3.3e-45 186.4 140 62.1
PSO832G1534 Papaver somniferum HOM05D005768 ORTHO05D007100 5.6e-45 185.7 153 62.7
Psat0s1830g0280 Pisum sativum HOM05D005768 ORTHO05D007100 5.6e-45 185.7 167 59.3
PSO063G1479 Papaver somniferum HOM05D005768 ORTHO05D007100 2.8e-44 183.3 155 62.6
PSO063G2632 Papaver somniferum HOM05D005768 ORTHO05D007100 2.8e-44 183.3 155 62.6
PSO063G5891 Papaver somniferum HOM05D005768 ORTHO05D007100 2.8e-44 183.3 155 62.6
Lalb_Chr24g0397251 Lupinus albus HOM05D005768 ORTHO05D007100 4.7e-44 182.6 151 62.9
Rhsim07G0145000 Rhododendron simsii HOM05D005768 ORTHO05D007100 1.4e-43 181.0 166 59.0
vmacro07473 Vaccinium macrocarpon HOM05D005768 ORTHO05D007100 2.3e-43 180.3 166 57.8
arahy.Tifrunner.gnm1.ann1.FJ9VJT Arachis hypogaea HOM05D005768 ORTHO05D007100 3.0e-43 179.9 151 62.9
CARHR021320 Cardamine hirsuta HOM05D005768 ORTHO05D007100 6.8e-43 178.7 155 56.8
Lj1g0020400 Lotus japonicus HOM05D005768 ORTHO05D007100 6.8e-43 178.7 151 60.9
MELO3C003477.2 Cucumis melo HOM05D005768 ORTHO05D007100 8.9e-43 178.3 148 60.8
Lalb_Chr08g0242881 Lupinus albus HOM05D005768 ORTHO05D007100 8.9e-43 178.3 151 58.3
Sed0022019 Sechium edule HOM05D005768 ORTHO05D007100 1.2e-42 177.9 148 60.1
QL12p040865 Quercus lobata HOM05D005768 ORTHO05D007100 2.6e-42 176.8 235 45.1
THA.LOC104812009 Tarenaya hassleriana HOM05D005768 ORTHO05D007100 4.4e-42 176.0 149 59.7
AT1G20890 Arabidopsis thaliana HOM05D005768 ORTHO05D007100 7.5e-42 175.3 149 59.1
Sp1g18590 Schrenkiella parvula HOM05D005768 ORTHO05D007100 9.8e-42 174.9 155 56.8
Aa31LG7G5050 Aethionema arabicum HOM05D005768 ORTHO05D007100 1.7e-41 174.1 173 51.4
Nn6g34840 Nelumbo nucifera HOM05D005768 ORTHO05D007100 1.7e-41 174.1 148 60.8
BcaB07g32084 Brassica carinata HOM05D005768 ORTHO05D007100 3.7e-41 172.9 155 57.4
CsaV3_3G048420 Cucumis sativus L. HOM05D005768 ORTHO05D007100 4.9e-41 172.6 148 58.8
Phvul.006G089400 Phaseolus vulgaris HOM05D005768 ORTHO05D007100 6.4e-41 172.2 166 56.0
Aqoxy7G01356 Aquilegia oxysepala HOM05D005768 ORTHO05D007100 1.1e-40 171.4 167 57.5
Thhalv10008823m.g Eutrema salsugineum HOM05D005768 ORTHO05D007100 1.1e-40 171.4 156 56.4
AL1G33910 Arabidopsis lyrata HOM05D005768 ORTHO05D007100 2.4e-40 170.2 149 57.0
Carub.0001s2036 Capsella rubella HOM05D005768 ORTHO05D007100 2.4e-40 170.2 155 55.5
Sed0000338 Sechium edule HOM05D005768 ORTHO05D007100 5.4e-40 169.1 148 56.8
BcaC06g34845 Brassica carinata HOM05D005768 ORTHO05D007100 7.0e-40 168.7 155 57.4
A07p15420 Brassica napus HOM05D005768 ORTHO05D007100 7.0e-40 168.7 155 56.8
Oeu033885.1 Olea europaea HOM05D005768 ORTHO05D007100 1.2e-39 167.9 110 74.5
FAN15G1520 Fragaria x ananassa HOM05D005768 ORTHO05D007100 2.7e-39 166.8 127 66.1
ECA234G0765 Erigeron canadensis HOM05D000185 ORTHO05D000105 7.8e-39 165.2 135 63.0
BcaB03g14295 Brassica carinata HOM05D005768 ORTHO05D007100 1.3e-38 164.5 155 56.8
vmacro05269 Vaccinium macrocarpon HOM05D005768 ORTHO05D007100 1.3e-38 164.5 171 55.0
AT1G76480 Arabidopsis thaliana HOM05D005768 ORTHO05D007100 8.6e-38 161.8 149 54.4
SalBow4G3076 Salvia bowleyana HOM05D005768 ORTHO05D007100 1.5e-37 161.0 166 54.2
PSO832G4156 Papaver somniferum HOM05D005768 ORTHO05D007100 3.3e-37 159.8 144 59.7
Hund19578 Selenicereus undatus HOM05D005768 ORTHO05D007100 2.1e-36 157.1 109 69.7
SEGI_27706 Sequoiadendron giganteum HOM05D005768 ORTHO05D007100 4.0e-35 152.9 155 51.0
Lj7A696G17 Lonicera japonica HOM05D005768 ORTHO05D007100 8.9e-35 151.8 166 51.8
Os03g0804100 Oryza sativa ssp. japonica HOM05D005768 ORTHO05D007100 1.9e-32 144.1 147 54.4
Zm00001eb061390 Zea mays HOM05D005768 ORTHO05D007100 2.4e-32 143.7 144 52.8
Os08g0374900 Oryza sativa ssp. japonica HOM05D005768 ORTHO05D007100 1.0e-30 138.3 147 52.4
ATR0693G003 Amborella trichopoda HOM05D005768 ORTHO05D007100 6.6e-30 135.6 161 46.0
PSO063G4631 Papaver somniferum HOM05D005768 ORTHO05D007100 1.9e-29 134.0 113 61.9
C05p19520 Brassica napus HOM05D005768 ORTHO05D007100 7.3e-29 132.1 182 44.5
BolC5t30654H Brassica oleracea HOM05D005768 ORTHO05D007100 7.3e-29 132.1 182 44.5
AL2G36620 Arabidopsis lyrata HOM05D005768 ORTHO05D007100 6.2e-28 129.0 149 48.3
BraA06t24798Z Brassica rapa HOM05D005768 ORTHO05D007100 8.1e-28 128.6 155 47.1
A06p16890 Brassica napus HOM05D005768 ORTHO05D007100 1.4e-27 127.9 135 54.1
Glyma.03G235400 Glycine max HOM05D005768 ORTHO05D007100 1.4e-27 127.9 132 56.1
MBI02_g46987_MAGBIO Magnolia biondii HOM05D005768 ORTHO05D007100 2.3e-27 127.1 97 64.9
BolC7t42805H Brassica oleracea HOM05D005768 ORTHO05D007100 5.2e-27 125.9 110 60.0
C07p22730 Brassica napus HOM05D005768 ORTHO05D007100 2.6e-26 123.6 110 59.1
Ca_05797_v3 Cicer arietinum L. HOM05D001134 ORTHO05D001035 6.4e-25 119.0 110 58.2
Thhalv10019630m.g Eutrema salsugineum HOM05D005768 ORTHO05D007100 4.6e-23 112.8 145 45.5
ClCG02G014210 Citrullus lanatus HOM05D005768 ORTHO05D007100 7.8e-23 112.1 99 58.6
Sc09g0009510 Simmondsia chinensis HOM05D005768 ORTHO05D007100 1.7e-22 110.9 88 62.5
Pp3c24_1520 Physcomitrium patens HOM05D005768 ORTHO05D007100 2.3e-22 110.5 139 41.7
HPP92_009604 Vanilla planifolia HOM05D005768 ORTHO05D007100 2.5e-21 107.1 103 51.5
CDE02G0943 Ceratophyllum demersum HOM05D005768 ORTHO05D007100 2.8e-20 103.6 95 54.7
FvH4_2g35150 Fragaria vesca HOM05D005768 ORTHO05D007100 5.2e-19 99.4 71 66.2
MBI02_g46884_MAGBIO Magnolia biondii HOM05D000614 ORTHO05D007100 5.8e-18 95.9 109 50.5
Mapoly0062s0068 Marchantia polymorpha HOM05D005768 ORTHO05D007100 7.6e-18 95.5 146 40.4
HanXRQChr14g0439211 Helianthus annuus HOM05D005768 ORTHO05D007100 3.9e-14 83.2 72 59.7
DCAR_003074 Daucus carota HOM05D001613 ORTHO05D001556 1.5e-13 81.3 73 57.5
Cre12.g547734 Chlamydomonas reinhardtii HOM05D005768 ORTHO05D007100 4.4e-10 69.7 106 43.4
Oeu002722.1 Olea europaea HOM05D005768 ORTHO05D007100 1.7e-09 67.8 77 50.6
CBR_g130 Chara braunii HOM05D000019 ORTHO05D000002 2.9e-09 67.0 153 31.4
ClCG11G015010 Citrullus lanatus HOM05D005768 ORTHO05D007100 3.8e-09 66.6 96 45.8


User provided reference genes

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