Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold1030G53801 Striga asiatica HOM05D009108 ORTHO05D011557 9.7e-110 400.2 208 100.0
SGA_v2.0_scaffold170G38837 Striga asiatica HOM05D009108 ORTHO05D011557 6.1e-72 274.6 194 79.4
SGA_v2.0_scaffold170G38839 Striga asiatica HOM05D009108 ORTHO05D011557 3.6e-64 248.8 214 68.2
SGA_v2.0_scaffold257G45673 Striga asiatica HOM05D009108 ORTHO05D011557 5.2e-55 218.4 115 94.8
Os03g0276850 Oryza sativa ssp. japonica HOM05D009108 ORTHO05D011557 7.1e-36 154.8 250 38.4
SGA_v2.0_scaffold63G21783 Striga asiatica HOM05D009108 ORTHO05D011557 9.9e-30 134.4 233 38.6
Nitab4.5_0001190g0020 Nicotiana tabacum HOM05D009108 ORTHO05D011557 7.8e-27 124.8 225 35.1
Nitab4.5_0009884g0010 Nicotiana tabacum HOM05D009108 ORTHO05D011557 1.7e-26 123.6 226 35.8
SGA_v2.0_scaffold126G33799 Striga asiatica HOM05D009108 ORTHO05D011557 2.3e-26 123.2 229 38.0
SGA_v2.0_scaffold75G24939 Striga asiatica HOM05D009108 ORTHO05D011557 3.1e-23 112.8 160 41.2
SGA_v2.0_scaffold257G45674 Striga asiatica HOM05D009108 ORTHO05D011557 8.7e-18 94.7 53 88.7
Os12g0569800 Oryza sativa ssp. japonica HOM05D009108 ORTHO05D011557 4.8e-16 89.0 159 39.0
SGA_v2.0_scaffold67G22546 Striga asiatica HOM05D009108 ORTHO05D402452 1.4e-12 77.4 40 92.5
SGA_v2.0_scaffold67G22574 Striga asiatica HOM05D009108 ORTHO05D405487 1.4e-12 77.4 40 97.5
Os02g0115950 Oryza sativa ssp. japonica HOM05D009108 ORTHO05D011557 8.7e-10 68.2 123 35.8
FAN01G2174 Fragaria x ananassa HOM05D009108 ORTHO05D011557 1.6e-08 63.9 83 42.2
SGA_v2.0_scaffold2902G54239 Striga asiatica HOM05D009108 ORTHO05D399099 1.6e-08 63.9 37 89.2
Hma1.2p1_1829F.1_g304550 Hydrangea macrophylla HOM05D009108 ORTHO05D011557 1.2e-06 57.8 89 36.0


User provided reference genes

Program Settings