Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold1027G53798 Striga asiatica HOM05D000886 ORTHO05D000525 2.4e-58 228.8 130 100.0
SGA_v2.0_scaffold73G24395 Striga asiatica HOM05D000886 ORTHO05D000525 1.9e-47 192.6 136 76.5
SGA_v2.0_scaffold189G40373 Striga asiatica HOM05D000886 ORTHO05D000525 1.5e-44 183.0 112 96.4
SGA_v2.0_scaffold51G18833 Striga asiatica HOM05D031511 ORTHO05D000525 3.4e-36 155.2 100 96.0
SGA_v2.0_scaffold225G43089 Striga asiatica HOM05D031511 ORTHO05D000525 3.7e-27 125.2 79 89.9
SGA_v2.0_scaffold240G44131 Striga asiatica HOM05D000886 ORTHO05D000525 1.2e-25 120.2 103 63.1
SGA_v2.0_scaffold10G05140 Striga asiatica HOM05D000206 ORTHO05D002004 4.7e-22 108.2 52 100.0
SalBow1G2078 Salvia bowleyana HOM05D000886 ORTHO05D000525 2.2e-19 99.4 101 51.5
Migut.K00159 Erythranthe guttata HOM05D000886 ORTHO05D000525 9.2e-18 94.0 103 50.5
Oeu060771.1 Olea europaea HOM05D000886 ORTHO05D000525 6.0e-17 91.3 101 48.5
Oeu064751.1 Olea europaea HOM05D000886 ORTHO05D000525 6.6e-16 87.8 103 45.6
Migut.J01613 Erythranthe guttata HOM05D000886 ORTHO05D000525 9.0e-13 77.4 101 39.6
Oeu060772.1 Olea europaea HOM05D000886 ORTHO05D000525 9.0e-13 77.4 103 40.8
Actinidia38124 Actinidia chinensis HOM05D000886 ORTHO05D000525 3.4e-12 75.5 101 41.6
Oeu064753.1 Olea europaea HOM05D000886 ORTHO05D000525 9.9e-12 73.9 103 40.8
MSTRG.19777 Avicennia marina HOM05D000886 ORTHO05D000525 1.3e-11 73.6 107 39.3
Nn7g36495 Nelumbo nucifera HOM05D000886 ORTHO05D000525 1.3e-11 73.6 103 38.8
HanXRQChr15g0495501 Helianthus annuus HOM05D000886 ORTHO05D000525 1.7e-11 73.2 101 40.6
HanXRQChr15g0495511 Helianthus annuus HOM05D000886 ORTHO05D000525 2.2e-11 72.8 101 38.6
Lsat_1_v5_gn_5_111240 Lactuca sativa HOM05D000886 ORTHO05D000525 6.4e-11 71.2 101 37.6
CAN.G208.12 Capsicum annuum HOM05D000886 ORTHO05D000525 8.4e-11 70.9 101 40.6
Lj8A26T46 Lonicera japonica HOM05D000886 ORTHO05D000525 8.4e-11 70.9 93 37.6
SalBow6G4799 Salvia bowleyana HOM05D000886 ORTHO05D000525 8.4e-11 70.9 101 38.6
Eucgr.K01677 Eucalyptus grandis HOM05D000886 ORTHO05D000525 1.1e-10 70.5 104 41.3
Hma1.2p1_1283F.1_g272790 Hydrangea macrophylla HOM05D000886 ORTHO05D000525 1.4e-10 70.1 101 38.6
Lsat_1_v5_gn_5_111280 Lactuca sativa HOM05D000886 ORTHO05D000525 1.4e-10 70.1 101 38.6
Lj2A411T32 Lonicera japonica HOM05D000886 ORTHO05D000525 1.4e-10 70.1 103 36.9
Dinv12028 Davidia involucrata HOM05D000886 ORTHO05D000525 2.4e-10 69.3 103 38.8
ECA232G4885 Erigeron canadensis HOM05D000886 ORTHO05D000525 2.4e-10 69.3 107 37.4
HanXRQChr09g0253651 Helianthus annuus HOM05D000886 ORTHO05D000525 2.4e-10 69.3 98 39.8
Lsat_1_v5_gn_5_161580 Lactuca sativa HOM05D000886 ORTHO05D000525 3.2e-10 68.9 103 35.9
Lalb_Chr03g0042881 Lupinus albus HOM05D000886 ORTHO05D000525 4.2e-10 68.6 98 38.8
Sopen12g031440 Solanum pennellii HOM05D000886 ORTHO05D000525 4.2e-10 68.6 101 41.6
CAN.G959.15 Capsicum annuum HOM05D000886 ORTHO05D000525 5.4e-10 68.2 103 38.8
Haze_20280 Corylus avellana HOM05D000886 ORTHO05D000525 5.4e-10 68.2 101 41.6
Haze_20285 Corylus avellana HOM05D000886 ORTHO05D000525 5.4e-10 68.2 101 41.6
Nitab4.5_0003694g0040 Nicotiana tabacum HOM05D000886 ORTHO05D000525 5.4e-10 68.2 103 39.8
Rhsim04G0117500 Rhododendron simsii HOM05D000886 ORTHO05D000525 5.4e-10 68.2 98 40.8
Rhsim04G0117600 Rhododendron simsii HOM05D000886 ORTHO05D000525 5.4e-10 68.2 98 39.8
Atru.chr1.1145 Acer truncatum HOM05D000886 ORTHO05D000525 7.1e-10 67.8 98 37.8
Solyc12g094540.1 Solanum lycopersicum HOM05D000886 ORTHO05D000525 9.3e-10 67.4 101 39.6
DCAR_013532 Daucus carota HOM05D000886 ORTHO05D000525 1.2e-09 67.0 101 38.6
HanXRQChr15g0495491 Helianthus annuus HOM05D000886 ORTHO05D000525 1.6e-09 66.6 126 32.5
Manes.08G161704 Manihot esculenta HOM05D000886 ORTHO05D000525 1.6e-09 66.6 101 38.6
Glyma.07G143200 Glycine max HOM05D000886 ORTHO05D000525 2.1e-09 66.2 93 39.8
Atru.chr1.1368 Acer truncatum HOM05D000886 ORTHO05D000525 2.7e-09 65.9 104 40.4
Aqoxy2G02684 Aquilegia oxysepala HOM05D000886 ORTHO05D000525 2.7e-09 65.9 101 33.7
ECA232G0479 Erigeron canadensis HOM05D000886 ORTHO05D000525 2.7e-09 65.9 103 35.0
Migut.J01614 Erythranthe guttata HOM05D000886 ORTHO05D000525 2.7e-09 65.9 103 37.9
Nitab4.5_0003544g0020 Nicotiana tabacum HOM05D000886 ORTHO05D000525 2.7e-09 65.9 103 39.8
Phvul.008G111200 Phaseolus vulgaris HOM05D000886 ORTHO05D000525 2.7e-09 65.9 93 37.6
SGA_v2.0_scaffold69G23180 Striga asiatica HOM05D000886 ORTHO05D000525 2.7e-09 65.9 104 37.5
Dinv17692 Davidia involucrata HOM05D000886 ORTHO05D000525 3.5e-09 65.5 103 35.9
HanXRQChr09g0255181 Helianthus annuus HOM05D000886 ORTHO05D000525 3.5e-09 65.5 98 36.7
MD09G1279200 Malus domestica HOM05D000886 ORTHO05D000525 3.5e-09 65.5 101 38.6
PGSC0003DMG400029410 Solanum tuberosum HOM05D000886 ORTHO05D000525 3.5e-09 65.5 101 40.6
Lsat_1_v5_gn_9_55780 Lactuca sativa HOM05D000886 ORTHO05D000525 4.6e-09 65.1 101 36.6
SalBow6G0974 Salvia bowleyana HOM05D000886 ORTHO05D000525 4.6e-09 65.1 103 37.9
Migut.K00157 Erythranthe guttata HOM05D000886 ORTHO05D000525 6.0e-09 64.7 114 38.6
Lj3g0008510 Lotus japonicus HOM05D000886 ORTHO05D000525 6.0e-09 64.7 101 37.6
MD03G1253300 Malus domestica HOM05D000886 ORTHO05D000525 6.0e-09 64.7 103 37.9
Nn4g25539 Nelumbo nucifera HOM05D000886 ORTHO05D000525 6.0e-09 64.7 98 37.8
Aqoxy2G02678 Aquilegia oxysepala HOM05D000886 ORTHO05D000525 7.8e-09 64.3 101 37.6
MELO3C009746.2 Cucumis melo HOM05D000886 ORTHO05D000525 7.8e-09 64.3 101 38.6
CsaV3_3G040060 Cucumis sativus L. HOM05D000886 ORTHO05D000525 7.8e-09 64.3 101 38.6
Nitab4.5_0000642g0270 Nicotiana tabacum HOM05D000886 ORTHO05D000525 7.8e-09 64.3 103 38.8
Cc06_g20650 Coffea canephora HOM05D000886 ORTHO05D000525 1.0e-08 63.9 109 38.5
Dinv03445 Davidia involucrata HOM05D000886 ORTHO05D000525 1.0e-08 63.9 104 36.5
Peaxi162Scf00975g00016 Petunia axillaris HOM05D000886 ORTHO05D000525 1.0e-08 63.9 100 36.0
CiPaw.09G051600 Carya illinoinensis HOM05D000886 ORTHO05D000525 1.3e-08 63.5 103 36.9
Nn4g25540 Nelumbo nucifera HOM05D000886 ORTHO05D000525 1.3e-08 63.5 101 36.6
ClCG10G016290 Citrullus lanatus HOM05D000886 ORTHO05D000525 1.7e-08 63.2 103 38.8
Lsat_1_v5_gn_9_55760 Lactuca sativa HOM05D000886 ORTHO05D000525 1.7e-08 63.2 101 36.6
Lsat_1_v5_gn_9_55720 Lactuca sativa HOM05D000886 ORTHO05D000525 2.3e-08 62.8 101 35.6
TAR623G1218 Trochodendron aralioides HOM05D000886 ORTHO05D000525 2.3e-08 62.8 98 37.8
HanXRQChr15g0495481 Helianthus annuus HOM05D000886 ORTHO05D000525 3.0e-08 62.4 126 31.0
Lsat_1_v5_gn_5_161560 Lactuca sativa HOM05D000886 ORTHO05D000525 3.0e-08 62.4 45 57.8
PSO017G6831 Papaver somniferum HOM05D000886 ORTHO05D000525 3.0e-08 62.4 97 36.1
PSO782G0468 Papaver somniferum HOM05D000886 ORTHO05D000525 3.0e-08 62.4 98 34.7
Potri.006G031400 Populus trichocarpa HOM05D000886 ORTHO05D000525 3.0e-08 62.4 104 36.5
ClCG10G016300 Citrullus lanatus HOM05D000886 ORTHO05D000525 3.9e-08 62.0 90 37.8
Nitab4.5_0000699g0130 Nicotiana tabacum HOM05D000886 ORTHO05D000525 3.9e-08 62.0 103 36.9
RcHm_v2.0_Chr5g0073181 Rosa chinensis HOM05D000886 ORTHO05D000525 3.9e-08 62.0 101 39.6
TAR623G1664 Trochodendron aralioides HOM05D000886 ORTHO05D000525 5.1e-08 61.6 103 35.9
Eucgr.D02522 Eucalyptus grandis HOM05D000886 ORTHO05D000525 6.6e-08 61.2 103 35.9
Potri.016G028700 Populus trichocarpa HOM05D000886 ORTHO05D000525 6.6e-08 61.2 104 37.5
Ciclev10012328m.g Citrus clementina HOM05D000886 ORTHO05D000525 8.7e-08 60.8 103 37.9
Dinv04815 Davidia involucrata HOM05D000886 ORTHO05D000525 8.7e-08 60.8 103 38.8
ECA232G1837 Erigeron canadensis HOM05D000886 ORTHO05D000525 8.7e-08 60.8 101 34.7
Eucgr.D02516 Eucalyptus grandis HOM05D000886 ORTHO05D000525 8.7e-08 60.8 103 35.0
PSO761G0004 Papaver somniferum HOM05D000886 ORTHO05D000525 8.7e-08 60.8 98 35.7
TWI53G1169 Tripterygium wilfordii HOM05D000886 ORTHO05D000525 8.7e-08 60.8 101 34.7
CSS0042968 Camellia sinensis var. sinensis HOM05D000886 ORTHO05D000525 1.1e-07 60.5 42 59.5
Ca_09165_v3 Cicer arietinum L. HOM05D000886 ORTHO05D000525 1.1e-07 60.5 104 32.7
FvH4_3g40510 Fragaria vesca HOM05D000886 ORTHO05D000525 1.1e-07 60.5 101 36.6
FAN11G3456 Fragaria x ananassa HOM05D000886 ORTHO05D000525 1.1e-07 60.5 101 36.6
FAN16G2738 Fragaria x ananassa HOM05D000886 ORTHO05D000525 1.1e-07 60.5 101 36.6
Peaxi162Scf00975g10015 Petunia axillaris HOM05D000886 ORTHO05D000525 1.1e-07 60.5 104 33.7
vmacro08978 Vaccinium macrocarpon HOM05D000886 ORTHO05D000525 1.1e-07 60.5 93 37.6
CDE12G0614 Ceratophyllum demersum HOM05D000886 ORTHO05D000525 1.5e-07 60.1 100 38.0
Prupe.4G179100 Prunus persica HOM05D000886 ORTHO05D000525 1.5e-07 60.1 101 36.6
SalBow6G6665 Salvia bowleyana HOM05D000886 ORTHO05D000525 1.5e-07 60.1 105 35.2
Sed0011417 Sechium edule HOM05D000886 ORTHO05D000525 1.5e-07 60.1 101 34.7
PSO675G0235 Papaver somniferum HOM05D000886 ORTHO05D000525 1.9e-07 59.7 88 37.5
TAR623G1595 Trochodendron aralioides HOM05D000886 ORTHO05D000525 1.9e-07 59.7 103 36.9
VMungo0647G0937 Vigna mungo HOM05D000886 ORTHO05D000525 2.5e-07 59.3 93 36.6
CsaV3_3G040040 Cucumis sativus L. HOM05D000886 ORTHO05D000525 3.3e-07 58.9 103 35.0
ECA232G0102 Erigeron canadensis HOM05D000886 ORTHO05D000525 3.3e-07 58.9 43 53.5
Eucgr.C04094 Eucalyptus grandis HOM05D000886 ORTHO05D000525 3.3e-07 58.9 103 35.9
FAN25G0223 Fragaria x ananassa HOM05D000886 ORTHO05D000525 3.3e-07 58.9 101 36.6
QL07p013665 Quercus lobata HOM05D000886 ORTHO05D000525 3.3e-07 58.9 98 34.7
TAR374G1684 Trochodendron aralioides HOM05D000886 ORTHO05D000525 3.3e-07 58.9 103 33.0
EL10Ac3g07294 Beta vulgaris HOM05D000886 ORTHO05D000525 4.3e-07 58.5 98 36.7
Lj1g0021355 Lotus japonicus HOM05D000886 ORTHO05D000525 4.3e-07 58.5 98 36.7
TPR.G1540 Trifolium pratense HOM05D000886 ORTHO05D000525 4.3e-07 58.5 103 30.1
Ca_09162_v3 Cicer arietinum L. HOM05D000886 ORTHO05D000525 5.6e-07 58.2 103 34.0
MBI18_g35538_MAGBIO Magnolia biondii HOM05D000886 ORTHO05D000525 5.6e-07 58.2 98 36.7
Nitab4.5_0011877g0020 Nicotiana tabacum HOM05D000886 ORTHO05D000525 5.6e-07 58.2 106 33.0
PSO210G1417 Papaver somniferum HOM05D000886 ORTHO05D000525 5.6e-07 58.2 99 33.3
TPR.G1581 Trifolium pratense HOM05D000886 ORTHO05D000525 5.6e-07 58.2 93 32.3
Zm00001eb157800 Zea mays HOM05D000886 ORTHO05D000525 5.6e-07 58.2 99 31.3
CDE12G0818 Ceratophyllum demersum HOM05D000886 ORTHO05D000525 7.3e-07 57.8 100 36.0
HanXRQChr09g0238531 Helianthus annuus HOM05D000886 ORTHO05D000525 7.3e-07 57.8 101 33.7
Lj4C788G2 Lonicera japonica HOM05D000886 ORTHO05D000525 7.3e-07 57.8 103 35.0
PGSC0003DMG400043401 Solanum tuberosum HOM05D000886 ORTHO05D000525 7.3e-07 57.8 103 38.8
Nitab4.5_0000296g0050 Nicotiana tabacum HOM05D000886 ORTHO05D000525 9.6e-07 57.4 106 34.0
Os01g0737700 Oryza sativa ssp. japonica HOM05D000886 ORTHO05D000525 9.6e-07 57.4 99 32.3
Sabra06G0021000 Salix brachista HOM05D000886 ORTHO05D000525 9.6e-07 57.4 104 34.6
Sc25g0005550 Simmondsia chinensis HOM05D000886 ORTHO05D000525 9.6e-07 57.4 103 35.9
SGA_v2.0_scaffold66G22305 Striga asiatica HOM05D000886 ORTHO05D000525 9.6e-07 57.4 102 33.3
CANSAT56G3317 Cannabis sativa HOM05D000886 ORTHO05D000525 1.3e-06 57.0 103 36.9
Ciclev10012747m.g Citrus clementina HOM05D000886 ORTHO05D000525 1.3e-06 57.0 102 36.3
MD14G1051900 Malus domestica HOM05D000886 ORTHO05D000525 1.3e-06 57.0 101 31.7
TPR.G1548 Trifolium pratense HOM05D000292 ORTHO05D000172 1.3e-06 57.0 104 31.7
Zm00001eb359560 Zea mays HOM05D000886 ORTHO05D000525 1.3e-06 57.0 98 34.7
AUR62021037 Chenopodium quinoa HOM05D000886 ORTHO05D000525 1.6e-06 56.6 42 52.4
Eucgr.J00899 Eucalyptus grandis HOM05D000886 ORTHO05D000525 1.6e-06 56.6 42 59.5
Os01g0660800 Oryza sativa ssp. japonica HOM05D000886 ORTHO05D000525 1.6e-06 56.6 101 33.7
Sed0018455 Sechium edule HOM05D000886 ORTHO05D000525 1.6e-06 56.6 99 34.3
AUR62018406 Chenopodium quinoa HOM05D000886 ORTHO05D000525 2.1e-06 56.2 47 48.9
Manes.08G161900 Manihot esculenta HOM05D000886 ORTHO05D000525 2.1e-06 56.2 81 39.5
Peaxi162Scf00011g01434 Petunia axillaris HOM05D000886 ORTHO05D000525 2.1e-06 56.2 94 36.2
Peaxi162Scf00069g00011 Petunia axillaris HOM05D000886 ORTHO05D000525 2.1e-06 56.2 101 38.6
Rhsim04G0069800 Rhododendron simsii HOM05D000886 ORTHO05D000525 2.8e-06 55.8 101 35.6
Solyc10g078200.1 Solanum lycopersicum HOM05D000886 ORTHO05D000525 2.8e-06 55.8 49 49.0
HPP92_008929 Vanilla planifolia HOM05D000886 ORTHO05D000525 2.8e-06 55.8 99 33.3
Psat3g135480 Pisum sativum HOM05D000886 ORTHO05D000525 3.6e-06 55.5 42 52.4
Sopen10g028880 Solanum pennellii HOM05D000886 ORTHO05D000525 3.6e-06 55.5 49 49.0
PGSC0003DMG400043674 Solanum tuberosum HOM05D000886 ORTHO05D000525 3.6e-06 55.5 98 34.7
Zm00001eb156970 Zea mays HOM05D000886 ORTHO05D000525 3.6e-06 55.5 99 29.3
CANSAT56G3075 Cannabis sativa HOM05D000886 ORTHO05D000525 4.8e-06 55.1 98 32.7
Nn2g14323 Nelumbo nucifera HOM05D000886 ORTHO05D000525 4.8e-06 55.1 101 32.7
Psat0s4525g0040 Pisum sativum HOM05D000886 ORTHO05D000525 4.8e-06 55.1 104 31.7
TWI74G0322 Tripterygium wilfordii HOM05D000886 ORTHO05D000525 4.8e-06 55.1 101 35.6
ECA232G0318 Erigeron canadensis HOM05D000886 ORTHO05D000525 6.2e-06 54.7 101 31.7
Glyma.18G194300 Glycine max HOM05D000886 ORTHO05D000525 6.2e-06 54.7 107 33.6
Lj8P110T28 Lonicera japonica HOM05D000886 ORTHO05D000525 6.2e-06 54.7 101 35.6
Os01g0737600 Oryza sativa ssp. japonica HOM05D000886 ORTHO05D000525 6.2e-06 54.7 98 31.6
Os04g0225100 Oryza sativa ssp. japonica HOM05D000886 ORTHO05D000525 6.2e-06 54.7 98 30.6
PSO541G5168 Papaver somniferum HOM05D000886 ORTHO05D000525 6.2e-06 54.7 88 36.4
Peaxi162Scf00877g00007 Petunia axillaris HOM05D000886 ORTHO05D000525 6.2e-06 54.7 98 33.7
Psat3g135440 Pisum sativum HOM05D000886 ORTHO05D000525 8.1e-06 54.3 42 50.0


User provided reference genes

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