Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold101G29789 Striga asiatica HOM05D006334 ORTHO05D008320 5.9e-84 315.1 299 100.0
Migut.M01801 Erythranthe guttata HOM05D006334 ORTHO05D008320 3.7e-70 269.2 303 84.8
Nitab4.5_0002342g0070 Nicotiana tabacum HOM05D006334 ORTHO05D008320 3.6e-65 252.7 300 74.7
MSTRG.27096 Avicennia marina HOM05D006334 ORTHO05D008320 4.7e-65 252.3 301 79.7
Nitab4.5_0002229g0170 Nicotiana tabacum HOM05D006334 ORTHO05D008320 8.0e-65 251.5 299 74.2
Solyc10g006460.3 Solanum lycopersicum HOM05D006334 ORTHO05D008320 1.8e-64 250.4 139 89.9
PGSC0003DMG400014399 Solanum tuberosum HOM05D006334 ORTHO05D008320 2.3e-64 250.0 137 90.5
Sopen10g002410 Solanum pennellii HOM05D006334 ORTHO05D008320 3.0e-64 249.6 139 89.9
CAN.G1110.6 Capsicum annuum HOM05D006334 ORTHO05D008320 8.8e-64 248.1 299 74.6
Eucgr.F03434 Eucalyptus grandis HOM05D006334 ORTHO05D008320 1.2e-63 247.7 193 80.8
Lj8A166G85 Lonicera japonica HOM05D006334 ORTHO05D008320 1.5e-63 247.3 142 86.6
vmacro09744 Vaccinium macrocarpon HOM05D006334 ORTHO05D008320 2.6e-63 246.5 295 73.6
CSS0039549 Camellia sinensis var. sinensis HOM05D006334 ORTHO05D008320 3.3e-63 246.1 142 85.2
Dinv22296 Davidia involucrata HOM05D006334 ORTHO05D008320 3.7e-62 242.7 142 83.8
Prupe.4G205200 Prunus persica HOM05D006334 ORTHO05D008320 1.1e-61 241.1 294 69.4
CiPaw.12G127100 Carya illinoinensis HOM05D006334 ORTHO05D008320 3.1e-61 239.6 295 65.4
COL.COLO4_09585 Corchorus olitorius HOM05D006334 ORTHO05D008320 3.1e-61 239.6 300 75.0
GSVIVG01001978001 Vitis vinifera HOM05D006334 ORTHO05D008320 3.1e-61 239.6 139 84.9
Aqoxy1G03666 Aquilegia oxysepala HOM05D006334 ORTHO05D008320 5.3e-61 238.8 142 82.4
Peaxi162Scf00407g00312 Petunia axillaris HOM05D006334 ORTHO05D008320 5.3e-61 238.8 142 83.1
Atru.chr2.3229 Acer truncatum HOM05D006334 ORTHO05D008320 7.0e-61 238.4 141 85.8
Nn1g07058 Nelumbo nucifera HOM05D006334 ORTHO05D008320 9.1e-61 238.0 132 87.1
Haze_09629 Corylus avellana HOM05D006334 ORTHO05D008320 1.2e-60 237.7 299 64.2
Lsat_1_v5_gn_7_109541 Lactuca sativa HOM05D006334 ORTHO05D008320 2.0e-60 236.9 290 65.5
Thecc.07G050800 Theobroma cacao HOM05D006334 ORTHO05D008320 2.0e-60 236.9 142 83.8
Peaxi162Scf00450g00858 Petunia axillaris HOM05D006334 ORTHO05D008320 4.5e-60 235.7 155 78.7
Ciclev10009059m.g Citrus clementina HOM05D006334 ORTHO05D008320 5.9e-60 235.3 142 81.7
Gorai.002G083500 Gossypium raimondii HOM05D006334 ORTHO05D008320 1.0e-59 234.6 142 82.4
Cfa020403 Carpinus fangiana HOM05D001306 ORTHO05D001159 1.3e-59 234.2 296 65.2
Duzib268G1565 Durio zibethinus HOM05D006334 ORTHO05D008320 1.3e-59 234.2 293 73.4
HanXRQChr11g0337741 Helianthus annuus HOM05D006334 ORTHO05D008320 1.3e-59 234.2 140 82.9
Gohir.D01G062800 Gossypium hirsutum HOM05D006334 ORTHO05D008320 1.7e-59 233.8 142 82.4
Cc05_g13330 Coffea canephora HOM05D006334 ORTHO05D008320 2.2e-59 233.4 302 73.8
Gohir.A01G075500 Gossypium hirsutum HOM05D006334 ORTHO05D008320 2.9e-59 233.0 141 82.3
TAR629G3436 Trochodendron aralioides HOM05D006334 ORTHO05D008320 3.8e-59 232.6 133 85.0
MBI02_g23962_MAGBIO Magnolia biondii HOM05D006334 ORTHO05D008320 5.0e-59 232.3 142 82.4
MD11G1224700 Malus domestica HOM05D006334 ORTHO05D008320 5.0e-59 232.3 142 81.0
DCAR_022532 Daucus carota HOM05D006334 ORTHO05D008320 6.5e-59 231.9 138 80.4
ECA236G0521 Erigeron canadensis HOM05D006334 ORTHO05D008320 6.5e-59 231.9 140 81.4
PSO210G7302 Papaver somniferum HOM05D006334 ORTHO05D008320 8.5e-59 231.5 142 82.4
FvH4_3g21950 Fragaria vesca HOM05D006334 ORTHO05D008320 1.1e-58 231.1 139 82.7
FAN11G3716 Fragaria x ananassa HOM05D006334 ORTHO05D008320 1.1e-58 231.1 139 82.7
Potri.001G418900 Populus trichocarpa HOM05D006334 ORTHO05D008320 1.1e-58 231.1 300 49.0
PGR031G1291 Punica granatum HOM05D006334 ORTHO05D008320 1.5e-58 230.7 307 80.1
Manes.03G123900 Manihot esculenta HOM05D006334 ORTHO05D008320 1.9e-58 230.3 137 81.8
PSO832G3755 Papaver somniferum HOM05D006334 ORTHO05D008320 1.9e-58 230.3 142 81.7
CsaV3_3G023200 Cucumis sativus L. HOM05D006334 ORTHO05D008320 2.5e-58 229.9 300 73.7
CsaV3_UNG104770 Cucumis sativus L. HOM05D006334 ORTHO05D008320 2.5e-58 229.9 300 73.7
MELO3C018091.2 Cucumis melo HOM05D006334 ORTHO05D008320 4.2e-58 229.2 300 73.7
Sabra16G0284400 Salix brachista HOM05D006334 ORTHO05D008320 4.2e-58 229.2 141 80.9
ClCG05G014700 Citrullus lanatus HOM05D006334 ORTHO05D008320 5.5e-58 228.8 290 65.9
FAN25G1013 Fragaria x ananassa HOM05D006334 ORTHO05D008320 5.5e-58 228.8 138 82.6
MD03G1210000 Malus domestica HOM05D006334 ORTHO05D008320 5.5e-58 228.8 136 81.6
QL08p012879 Quercus lobata HOM05D006334 ORTHO05D008320 5.5e-58 228.8 192 66.1
RcHm_v2.0_Chr5g0037801 Rosa chinensis HOM05D006334 ORTHO05D008320 5.5e-58 228.8 139 82.0
QL08p012752 Quercus lobata HOM05D006334 ORTHO05D008320 9.4e-58 228.0 139 81.3
Haze_24344 Corylus avellana HOM05D003220 ORTHO05D003944 1.2e-57 227.6 138 82.6
RhsimUnG0252800 Rhododendron simsii HOM05D006334 ORTHO05D008320 3.6e-57 226.1 173 69.4
TWI38G1766 Tripterygium wilfordii HOM05D006334 ORTHO05D008320 3.0e-56 223.0 302 64.9
CDE05G3377 Ceratophyllum demersum HOM05D006334 ORTHO05D008320 6.8e-56 221.9 180 77.2
AUR62020535 Chenopodium quinoa HOM05D006334 ORTHO05D008320 6.8e-56 221.9 286 57.3
Lj3g0002745 Lotus japonicus HOM05D006334 ORTHO05D008320 1.2e-55 221.1 301 73.8
arahy.Tifrunner.gnm1.ann1.9AY9GA Arachis hypogaea HOM05D006334 ORTHO05D008320 1.5e-55 220.7 297 67.3
arahy.Tifrunner.gnm1.ann1.Q0MPW2 Arachis hypogaea HOM05D006334 ORTHO05D008320 1.5e-55 220.7 297 67.7
A03p57090 Brassica napus HOM05D006334 ORTHO05D008320 1.5e-55 220.7 144 77.8
BraA03t14779Z Brassica rapa HOM05D006334 ORTHO05D008320 1.5e-55 220.7 144 77.8
Ca_01740_v3 Cicer arietinum L. HOM05D006334 ORTHO05D008320 2.0e-55 220.3 193 82.4
THA.LOC104812531 Tarenaya hassleriana HOM05D006334 ORTHO05D008320 2.6e-55 219.9 297 69.7
CARHR234770 Cardamine hirsuta HOM05D006334 ORTHO05D008320 4.4e-55 219.2 144 78.5
Phvul.005G092400 Phaseolus vulgaris HOM05D006334 ORTHO05D008320 4.4e-55 219.2 187 73.8
AUR62005409 Chenopodium quinoa HOM05D006334 ORTHO05D008320 5.7e-55 218.8 140 79.3
AUR62015668 Chenopodium quinoa HOM05D006334 ORTHO05D008320 5.7e-55 218.8 129 83.7
Thhalv10025846m.g Eutrema salsugineum HOM05D006334 ORTHO05D008320 7.5e-55 218.4 144 77.8
VMungo1080G0184 Vigna mungo HOM05D006334 ORTHO05D008320 7.5e-55 218.4 291 78.7
AL7G25680 Arabidopsis lyrata HOM05D006334 ORTHO05D008320 9.8e-55 218.0 144 78.5
AT4G27120 Arabidopsis thaliana HOM05D006334 ORTHO05D008320 9.8e-55 218.0 144 78.5
BcaC06g32710 Brassica carinata HOM05D006334 ORTHO05D008320 9.8e-55 218.0 143 77.6
C07p54970 Brassica napus HOM05D006334 ORTHO05D008320 9.8e-55 218.0 143 77.6
Aa31LG5G10300 Aethionema arabicum HOM05D006334 ORTHO05D008320 1.7e-54 217.2 301 69.1
BcaNung03057 Brassica carinata HOM05D006334 ORTHO05D008320 1.7e-54 217.2 143 78.3
TPR.G19971 Trifolium pratense HOM05D006334 ORTHO05D008320 2.2e-54 216.9 194 83.0
Sed0009538 Sechium edule HOM05D006334 ORTHO05D008320 2.8e-54 216.5 133 80.5
Hund23297 Selenicereus undatus HOM05D006334 ORTHO05D008320 2.8e-54 216.5 142 77.5
BraA01t01781Z Brassica rapa HOM05D006334 ORTHO05D008320 4.8e-54 215.7 143 77.6
Glyma.12G213500 Glycine max HOM05D006334 ORTHO05D008320 4.8e-54 215.7 292 83.2
Carub.0008s0614 Capsella rubella HOM05D006334 ORTHO05D008320 6.3e-54 215.3 143 78.3
Sc07g0002760 Simmondsia chinensis HOM05D006334 ORTHO05D008320 6.3e-54 215.3 296 65.9
Psat5g251960 Pisum sativum HOM05D006334 ORTHO05D008320 8.3e-54 214.9 138 79.0
Glyma.13G288200 Glycine max HOM05D006334 ORTHO05D008320 1.4e-53 214.2 131 80.9
unitig_748.g7233 Utricularia gibba HOM05D006334 ORTHO05D008320 1.4e-53 214.2 294 62.9
Medtr2g083200 Medicago truncatula HOM05D006334 ORTHO05D008320 1.8e-53 213.8 138 79.0
BolC7t46013H Brassica oleracea HOM05D006334 ORTHO05D001501 2.4e-53 213.4 133 81.2
Lalb_Chr24g0400251 Lupinus albus HOM05D006334 ORTHO05D008320 3.1e-53 213.0 138 77.5
Sp7g25090 Schrenkiella parvula HOM05D006334 ORTHO05D008320 3.1e-53 213.0 144 76.4
Zm00001eb298180 Zea mays HOM05D006334 ORTHO05D008320 5.4e-53 212.2 181 65.2
C01p23260 Brassica napus HOM05D006334 ORTHO05D008320 7.0e-53 211.8 143 76.9
BolC1t02259H Brassica oleracea HOM05D006334 ORTHO05D008320 7.0e-53 211.8 144 75.7
Os07g0103200 Oryza sativa ssp. japonica HOM05D006334 ORTHO05D008320 7.0e-53 211.8 196 71.4
Carub.0007s1372 Capsella rubella HOM05D006334 ORTHO05D008320 1.2e-52 211.1 143 76.9
Ah.04g165560 Amaranthus hybridus HOM05D006334 ORTHO05D008320 1.6e-52 210.7 129 79.8
A01p18260 Brassica napus HOM05D006334 ORTHO05D008320 4.5e-52 209.1 127 80.3
HPP92_014117 Vanilla planifolia HOM05D006334 ORTHO05D008320 1.1e-50 204.5 129 77.5
SEGI_34639 Sequoiadendron giganteum HOM05D006334 ORTHO05D008320 4.7e-49 199.1 123 77.2
Actinidia35324 Actinidia chinensis HOM05D006334 ORTHO05D008320 3.0e-48 196.4 105 87.6
Mapoly0114s0022 Marchantia polymorpha HOM05D006334 ORTHO05D008320 3.7e-46 189.5 135 69.6
Pp3c20_19360 Physcomitrium patens HOM05D006334 ORTHO05D008320 1.6e-44 184.1 134 68.7
SMO143G0307 Selaginella moellendorffii HOM05D006334 ORTHO05D008320 2.0e-44 183.7 137 67.2
EL10Ac4g07940 Beta vulgaris HOM05D006334 ORTHO05D008320 7.8e-44 181.8 155 66.5
Actinidia10714 Actinidia chinensis HOM05D006334 ORTHO05D008320 2.8e-41 173.3 105 82.9
AagrBONN_evm.TU.Sc2ySwM_228.581 Anthoceros agrestis HOM05D006334 ORTHO05D008320 3.6e-41 172.9 134 64.9
AagrBONN_evm.TU.Sc2ySwM_368.826 Anthoceros agrestis HOM05D006334 ORTHO05D008320 4.7e-41 172.6 128 66.4
FAN21G3458 Fragaria x ananassa HOM05D006334 ORTHO05D008320 6.1e-41 172.2 145 66.9
CBR_g8852 Chara braunii HOM05D006334 ORTHO05D008320 1.7e-38 164.1 123 61.0
Oeu032444.1 Olea europaea HOM05D006334 ORTHO05D008320 4.4e-31 139.4 77 81.8
Cre02.g101100 Chlamydomonas reinhardtii HOM05D006334 ORTHO05D008320 2.7e-28 130.2 119 55.5
ATR0697G296 Amborella trichopoda HOM05D006334 ORTHO05D008320 1.3e-22 111.3 65 78.5
Cpa.g.sc97.55 Carica papaya HOM05D006334 ORTHO05D008320 2.9e-22 110.2 115 74.8
FAN16G1435 Fragaria x ananassa HOM05D006334 ORTHO05D008320 1.9e-21 107.5 68 80.9
Cpa.g.sc97.53 Carica papaya HOM05D006334 ORTHO05D008320 5.4e-21 105.9 67 80.6
Haze_27349 Corylus avellana HOM05D006334 ORTHO05D008320 1.2e-20 104.8 120 43.3
BcaC09g50615 Brassica carinata HOM05D006334 ORTHO05D008320 3.3e-18 96.7 60 78.3
FAN16G3226 Fragaria x ananassa HOM05D006334 ORTHO05D008320 1.9e-10 70.9 41 80.5
SGA_v2.0_scaffold8G04454 Striga asiatica HOM05D006334 ORTHO05D400598 5.8e-07 59.3 31 100.0


User provided reference genes

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