Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold101G29731 Striga asiatica HOM05D005408 ORTHO05D006790 0.0e+00 1625.5 820 100.0
Oeu002940.1 Olea europaea HOM05D005408 ORTHO05D006790 2.9e-250 869.0 907 54.2
Migut.N00286 Erythranthe guttata HOM05D005408 ORTHO05D006790 1.9e-238 829.7 934 52.1
MSTRG.21921 Avicennia marina HOM05D005408 ORTHO05D006790 1.4e-236 823.5 966 51.2
Migut.G00502 Erythranthe guttata HOM05D005408 ORTHO05D006790 3.3e-230 802.4 862 54.9
SalBow3G0714 Salvia bowleyana HOM05D005408 ORTHO05D006790 6.9e-228 794.7 956 50.1
Oeu005084.1 Olea europaea HOM05D005408 ORTHO05D006790 3.8e-226 788.9 915 50.5
Actinidia20821 Actinidia chinensis HOM05D005408 ORTHO05D006790 1.9e-225 786.6 976 47.5
SGA_v2.0_scaffold43G16217 Striga asiatica HOM05D005408 ORTHO05D006790 4.1e-220 768.8 955 50.4
Dinv27073 Davidia involucrata HOM05D005408 ORTHO05D006790 5.9e-219 765.0 996 46.1
DCAR_024278 Daucus carota HOM05D005408 ORTHO05D006790 2.1e-216 756.5 882 49.8
CSS0047984 Camellia sinensis var. sinensis HOM05D005408 ORTHO05D006790 5.2e-215 751.9 990 46.5
Dinv29839 Davidia involucrata HOM05D005408 ORTHO05D006790 1.5e-214 750.4 956 46.7
Peaxi162Scf00392g00730 Petunia axillaris HOM05D005408 ORTHO05D006790 7.4e-214 748.0 933 47.5
Sopen09g033240 Solanum pennellii HOM05D005408 ORTHO05D006790 1.7e-213 746.9 946 46.6
PGSC0003DMG400017212 Solanum tuberosum HOM05D005408 ORTHO05D006790 1.2e-211 740.7 946 46.7
GSVIVG01027854001 Vitis vinifera HOM05D005408 ORTHO05D006790 2.6e-211 739.6 922 47.9
MSTRG.4147 Avicennia marina HOM05D005408 ORTHO05D006790 3.5e-211 739.2 853 51.6
Solyc09g090340.3 Solanum lycopersicum HOM05D005408 ORTHO05D006790 1.3e-210 737.3 941 46.4
CAN.G220.39 Capsicum annuum HOM05D005408 ORTHO05D006790 1.7e-210 736.9 991 44.7
Cc03_g05790 Coffea canephora HOM05D005408 ORTHO05D006790 1.5e-209 733.8 916 48.3
Thecc.04G259100 Theobroma cacao HOM05D005408 ORTHO05D006790 1.2e-208 730.7 918 47.6
CSS0016984 Camellia sinensis var. sinensis HOM05D005408 ORTHO05D006790 1.0e-207 727.6 979 45.9
FAN12G0827 Fragaria x ananassa HOM05D005408 ORTHO05D006790 1.8e-207 726.9 919 47.8
FvH4_4g04020 Fragaria vesca HOM05D005408 ORTHO05D006790 8.8e-207 724.5 919 47.8
Rhsim02G0041600 Rhododendron simsii HOM05D005408 ORTHO05D006790 4.4e-206 722.2 675 55.3
Atru.chr4.2004 Acer truncatum HOM05D005408 ORTHO05D006790 9.7e-206 721.1 901 47.8
Aa31LG9G3050 Aethionema arabicum HOM05D005408 ORTHO05D006790 9.7e-206 721.1 877 45.8
Prupe.1G042300 Prunus persica HOM05D005408 ORTHO05D006790 1.3e-205 720.7 1003 45.4
Haze_11418 Corylus avellana HOM05D005408 ORTHO05D006790 2.8e-205 719.5 958 46.2
QL06p019224 Quercus lobata HOM05D005408 ORTHO05D006790 3.7e-205 719.2 913 47.6
TAR633G1608 Trochodendron aralioides HOM05D005408 ORTHO05D006790 8.2e-205 718.0 1011 44.3
TAR362G0279 Trochodendron aralioides HOM05D005408 ORTHO05D006790 5.3e-204 715.3 996 44.8
Cfa014743 Carpinus fangiana HOM05D005408 ORTHO05D006790 7.0e-204 714.9 953 46.0
Lj3A679T38 Lonicera japonica HOM05D005408 ORTHO05D006790 9.1e-204 714.5 977 45.0
Ciclev10004264m.g Citrus clementina HOM05D005408 ORTHO05D006790 1.6e-203 713.8 894 45.7
Potri.008G169200 Populus trichocarpa HOM05D005408 ORTHO05D006790 1.6e-203 713.8 919 46.8
vmacro15459 Vaccinium macrocarpon HOM05D005408 ORTHO05D006790 2.0e-203 713.4 710 53.7
CiPaw.02G109300 Carya illinoinensis HOM05D005408 ORTHO05D006790 3.5e-203 712.6 953 45.6
Duzib151G0888 Durio zibethinus HOM05D005408 ORTHO05D006790 1.7e-202 710.3 923 46.6
Potri.010G069200 Populus trichocarpa HOM05D005408 ORTHO05D006790 1.7e-202 710.3 931 46.4
MD13G1216600 Malus domestica HOM05D005408 ORTHO05D006790 3.8e-202 709.1 979 44.9
RcHm_v2.0_Chr4g0394291 Rosa chinensis HOM05D005408 ORTHO05D006790 8.5e-202 708.0 945 46.1
Lj3A684T25 Lonicera japonica HOM05D005408 ORTHO05D006790 1.1e-201 707.6 999 44.7
FAN17G2537 Fragaria x ananassa HOM05D005408 ORTHO05D006790 1.5e-201 707.2 930 46.3
Nn1g02867 Nelumbo nucifera HOM05D005408 ORTHO05D006790 4.2e-201 705.7 990 43.1
Sp7g12340 Schrenkiella parvula HOM05D005408 ORTHO05D006790 7.2e-201 704.9 890 46.4
MD16G1222000 Malus domestica HOM05D005408 ORTHO05D006790 1.4e-199 700.7 979 44.0
EL10Ac3g04981 Beta vulgaris HOM05D005408 ORTHO05D006790 2.3e-199 699.9 954 45.3
Duzib212G0761 Durio zibethinus HOM05D005408 ORTHO05D006790 2.3e-199 699.9 908 47.9
AT4G14310 Arabidopsis thaliana HOM05D005408 ORTHO05D006790 1.2e-198 697.6 882 46.1
AUR62015544 Chenopodium quinoa HOM05D005408 ORTHO05D006790 1.5e-198 697.2 726 53.2
COL.COLO4_15917 Corchorus olitorius HOM05D005408 ORTHO05D006790 1.5e-198 697.2 890 47.0
CANSAT54G2691 Cannabis sativa HOM05D005408 ORTHO05D006790 2.6e-198 696.4 945 44.4
Manes.15G043200 Manihot esculenta HOM05D005408 ORTHO05D006790 5.7e-198 695.3 919 45.3
Nitab4.5_0000596g0060 Nicotiana tabacum HOM05D005408 ORTHO05D006790 7.5e-198 694.9 1064 41.1
ClCG05G004200 Citrullus lanatus HOM05D005408 ORTHO05D006790 3.7e-197 692.6 976 43.0
Manes.15G043300 Manihot esculenta HOM05D005408 ORTHO05D006790 3.7e-197 692.6 869 46.3
HanXRQChr11g0330791 Helianthus annuus HOM05D005408 ORTHO05D006790 4.8e-197 692.2 901 46.3
CARHR220500 Cardamine hirsuta HOM05D005408 ORTHO05D006790 6.3e-197 691.8 889 45.6
Nitab4.5_0000044g0530 Nicotiana tabacum HOM05D005408 ORTHO05D006790 6.3e-197 691.8 983 43.0
Thhalv10024359m.g Eutrema salsugineum HOM05D005408 ORTHO05D006790 1.1e-196 691.0 845 46.9
Lalb_Chr03g0037341 Lupinus albus HOM05D005408 ORTHO05D006790 1.4e-196 690.6 921 46.0
TWI53G1583 Tripterygium wilfordii HOM05D005408 ORTHO05D006790 1.8e-196 690.3 932 44.4
Hma1.2p1_0112F.1_g054305 Hydrangea macrophylla HOM05D005408 ORTHO05D006790 2.4e-196 689.9 677 52.6
CiPaw.01G181400 Carya illinoinensis HOM05D005408 ORTHO05D006790 3.1e-196 689.5 940 44.8
TWI09G0385 Tripterygium wilfordii HOM05D005408 ORTHO05D006790 3.1e-196 689.5 931 44.8
MELO3C006406.2 Cucumis melo HOM05D005408 ORTHO05D006790 4.1e-196 689.1 977 42.5
C03p76860 Brassica napus HOM05D005408 ORTHO05D006790 7.0e-196 688.3 838 47.7
CsaV3_3G011930 Cucumis sativus L. HOM05D005408 ORTHO05D006790 7.0e-196 688.3 976 42.5
ECA248G0134 Erigeron canadensis HOM05D005408 ORTHO05D006790 7.0e-196 688.3 878 46.9
Hund03055 Selenicereus undatus HOM05D005408 ORTHO05D006790 2.0e-195 686.8 702 52.3
AL7G41950 Arabidopsis lyrata HOM05D005408 ORTHO05D006790 3.5e-195 686.0 852 46.0
BcaC01g00205 Brassica carinata HOM05D005408 ORTHO05D006790 7.7e-195 684.9 835 47.4
Gohir.A02G040500 Gossypium hirsutum HOM05D005408 ORTHO05D006790 7.7e-195 684.9 922 46.0
A08p24350 Brassica napus HOM05D005408 ORTHO05D006790 1.0e-194 684.5 838 47.4
Sc19g0003230 Simmondsia chinensis HOM05D005408 ORTHO05D006790 1.3e-194 684.1 930 45.3
Gohir.D02G046500 Gossypium hirsutum HOM05D005408 ORTHO05D006790 2.9e-194 682.9 923 46.2
BcaNung06103 Brassica carinata HOM05D005408 ORTHO05D006790 1.5e-193 680.6 839 47.0
Carub.0007s2798 Capsella rubella HOM05D005408 ORTHO05D006790 1.9e-193 680.2 880 45.9
PGR004G2334 Punica granatum HOM05D005408 ORTHO05D006790 1.9e-193 680.2 910 45.4
Sabra10G0037900 Salix brachista HOM05D005408 ORTHO05D006790 1.9e-193 680.2 936 45.6
Eucgr.H03018 Eucalyptus grandis HOM05D005408 ORTHO05D006790 1.6e-192 677.2 939 44.4
BolC3t19941H Brassica oleracea HOM05D005408 ORTHO05D006790 2.1e-192 676.8 854 46.4
PSO832G1937 Papaver somniferum HOM05D005408 ORTHO05D006790 4.7e-192 675.6 954 44.0
arahy.Tifrunner.gnm1.ann1.HQEG75 Arachis hypogaea HOM05D005408 ORTHO05D006790 1.4e-191 674.1 884 45.0
Glyma.02G003800 Glycine max HOM05D005408 ORTHO05D006790 2.3e-191 673.3 648 54.3
Lsat_1_v5_gn_1_74661 Lactuca sativa HOM05D005408 ORTHO05D006790 3.0e-191 672.9 911 45.8
arahy.Tifrunner.gnm1.ann1.NA4LRU Arachis hypogaea HOM05D005408 ORTHO05D006790 5.2e-191 672.2 879 45.1
Cpa.g.sc44.32 Carica papaya HOM05D005408 ORTHO05D006790 5.2e-191 672.2 908 46.7
BraA08t34390Z Brassica rapa HOM05D005408 ORTHO05D006790 6.8e-191 671.8 862 46.1
Sabra08G0129000 Salix brachista HOM05D005408 ORTHO05D006790 1.5e-190 670.6 943 45.0
FAN22G0039 Fragaria x ananassa HOM05D005408 ORTHO05D006790 3.4e-190 669.5 973 43.7
Lj6g0021221 Lotus japonicus HOM05D005408 ORTHO05D006790 9.8e-190 667.9 831 46.1
AUR62002164 Chenopodium quinoa HOM05D005408 ORTHO05D006790 2.8e-189 666.4 917 45.3
Psat6g104520 Pisum sativum HOM05D005408 ORTHO05D006790 1.1e-188 664.5 842 46.6
THA.LOC104804761 Tarenaya hassleriana HOM05D005408 ORTHO05D006790 1.8e-188 663.7 883 44.7
Ca_03010_v3 Cicer arietinum L. HOM05D005408 ORTHO05D006790 5.4e-188 662.1 789 48.9
PSO210G0343 Papaver somniferum HOM05D005408 ORTHO05D006790 9.2e-188 661.4 956 43.6
TPR.G25189 Trifolium pratense HOM05D005408 ORTHO05D006790 7.8e-187 658.3 781 47.8
MBI07_g31083_MAGBIO Magnolia biondii HOM05D005408 ORTHO05D006790 1.0e-186 657.9 971 43.3
Sed0026902 Sechium edule HOM05D005408 ORTHO05D006790 3.8e-186 656.0 924 43.3
Glyma.10G004700 Glycine max HOM05D005408 ORTHO05D006790 8.6e-186 654.8 639 53.5
Medtr1g041685 Medicago truncatula HOM05D005408 ORTHO05D006790 1.9e-185 653.7 800 46.4
THA.LOC104822240 Tarenaya hassleriana HOM05D005408 ORTHO05D006790 3.3e-185 652.9 928 44.1
VMungo0720G1073 Vigna mungo HOM05D005408 ORTHO05D006790 1.0e-183 647.9 808 45.3
Gorai.005G051300 Gossypium raimondii HOM05D005408 ORTHO05D006790 5.2e-183 645.6 867 46.1
Phvul.007G275400 Phaseolus vulgaris HOM05D005408 ORTHO05D006790 6.8e-183 645.2 644 52.3
Aqoxy5G00183 Aquilegia oxysepala HOM05D005408 ORTHO05D006790 3.4e-182 642.9 965 42.2
HanXRQChr01g0023201 Helianthus annuus HOM05D005408 ORTHO05D006790 1.9e-177 627.1 928 43.0
Zm00001eb258510 Zea mays HOM05D005408 ORTHO05D006790 8.1e-168 595.1 680 47.1
Zm00001eb191660 Zea mays HOM05D005408 ORTHO05D006790 1.8e-167 594.0 693 46.6
ATR0736G089 Amborella trichopoda HOM05D005408 ORTHO05D006790 4.9e-165 585.9 732 46.4
unitig_736.g22443 Utricularia gibba HOM05D005408 ORTHO05D006790 5.4e-156 555.8 751 44.9
CDE04G2551 Ceratophyllum demersum HOM05D005408 ORTHO05D006790 8.7e-154 548.5 669 46.6
CDE07G1006 Ceratophyllum demersum HOM05D005408 ORTHO05D006790 1.2e-150 538.1 820 40.5
SEGI_14734 Sequoiadendron giganteum HOM05D005408 ORTHO05D006790 9.6e-137 491.9 838 37.6
HPP92_008326 Vanilla planifolia HOM05D005408 ORTHO05D006790 2.1e-136 490.7 641 44.8
TPR.G25191 Trifolium pratense HOM05D005408 ORTHO05D006790 2.9e-117 427.2 659 39.3
Ah.13g072600 Amaranthus hybridus HOM05D005408 ORTHO05D006790 1.1e-105 388.7 706 39.0
Mapoly0063s0094 Marchantia polymorpha HOM05D005408 ORTHO05D006790 1.1e-103 382.1 553 38.3
Pp3c16_10130 Physcomitrium patens HOM05D005408 ORTHO05D006790 6.5e-93 346.3 478 38.9
Pp3c25_7300 Physcomitrium patens HOM05D005408 ORTHO05D006790 8.0e-91 339.3 942 30.3
AagrBONN_evm.TU.Sc2ySwM_228.3605 Anthoceros agrestis HOM05D005408 ORTHO05D006790 1.8e-90 338.2 485 40.4
Os02g0809900 Oryza sativa ssp. japonica HOM05D005408 ORTHO05D006790 4.8e-88 330.1 306 52.6
SalBow7G4774 Salvia bowleyana HOM05D005408 ORTHO05D006790 1.1e-36 159.5 170 52.9
SalBow8G3468 Salvia bowleyana HOM05D005408 ORTHO05D006790 5.6e-36 157.1 117 70.1
CBR_g30942 Chara braunii HOM05D005408 ORTHO05D006790 1.3e-29 136.0 437 27.2
SGA_v2.0_scaffold57G20265 Striga asiatica HOM05D005408 ORTHO05D006790 1.3e-21 109.4 77 76.6
Rhsim02G0041700 Rhododendron simsii HOM05D005408 ORTHO05D006790 4.5e-17 94.4 172 35.5
Hund11908 Selenicereus undatus HOM05D005408 ORTHO05D006790 1.7e-16 92.4 128 41.4
CiPaw.06G041800 Carya illinoinensis HOM05D005408 ORTHO05D006790 7.1e-15 87.0 321 32.7
C04p41430 Brassica napus HOM05D005408 ORTHO05D006790 1.9e-12 79.0 143 36.4
BolC4t25724H Brassica oleracea HOM05D005408 ORTHO05D006790 2.5e-12 78.6 143 37.1
BolC4t25725H Brassica oleracea HOM05D005408 ORTHO05D006790 6.2e-11 73.9 102 42.2
C04p41440 Brassica napus HOM05D005408 ORTHO05D006790 1.2e-09 69.7 102 41.2
BcaC02g09333 Brassica carinata HOM05D005408 ORTHO05D006790 1.9e-07 62.4 71 47.9
unitig_899.g14890 Utricularia gibba HOM05D005408 ORTHO05D416926 4.6e-06 57.8 85 45.9


User provided reference genes

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