Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold100G29692 Striga asiatica HOM05D007285 ORTHO05D009224 9.2e-51 203.4 111 100.0
MSTRG.7339 Avicennia marina HOM05D007285 ORTHO05D009224 1.5e-37 159.5 106 80.2
Migut.M01131 Erythranthe guttata HOM05D007285 ORTHO05D009224 3.2e-35 151.8 106 79.2
Hma1.2p1_0208F.1_g088230 Hydrangea macrophylla HOM05D007285 ORTHO05D009224 5.1e-33 144.4 107 72.0
Rhsim02G0132100 Rhododendron simsii HOM05D007285 ORTHO05D009224 6.7e-33 144.1 105 75.2
Actinidia07587 Actinidia chinensis HOM05D007285 ORTHO05D009224 8.7e-33 143.7 98 80.6
SalBow8G5072 Salvia bowleyana HOM05D007285 ORTHO05D009224 2.5e-32 142.1 94 81.9
Dinv40575 Davidia involucrata HOM05D007285 ORTHO05D009224 5.6e-32 141.0 98 75.5
Ca_18554_v3 Cicer arietinum L. HOM05D007285 ORTHO05D009224 1.6e-31 139.4 106 72.6
Medtr4g088680 Medicago truncatula HOM05D007285 ORTHO05D009224 1.4e-30 136.3 99 76.8
COL.COLO4_31450 Corchorus olitorius HOM05D007285 ORTHO05D009224 3.1e-30 135.2 103 73.8
TPR.G16329 Trifolium pratense HOM05D007285 ORTHO05D009224 4.0e-30 134.8 102 73.5
arahy.Tifrunner.gnm1.ann1.J7N80D Arachis hypogaea HOM05D007285 ORTHO05D009224 9.0e-30 133.7 106 68.9
arahy.Tifrunner.gnm1.ann1.VSLT1W Arachis hypogaea HOM05D007285 ORTHO05D009224 9.0e-30 133.7 106 68.9
Sopen02g022850 Solanum pennellii HOM05D007285 ORTHO05D009224 9.0e-30 133.7 109 67.9
Solyc02g078010.4 Solanum lycopersicum HOM05D007285 ORTHO05D009224 1.2e-29 133.3 109 67.9
Actinidia26129 Actinidia chinensis HOM05D007285 ORTHO05D009224 1.5e-29 132.9 103 73.8
CSS0032734 Camellia sinensis var. sinensis HOM05D007285 ORTHO05D009224 1.5e-29 132.9 110 68.2
Cc02_g13540 Coffea canephora HOM05D007285 ORTHO05D009224 1.5e-29 132.9 110 65.5
DCAR_008032 Daucus carota HOM05D007285 ORTHO05D009224 1.5e-29 132.9 109 69.7
Nitab4.5_0005745g0020 Nicotiana tabacum HOM05D007285 ORTHO05D009224 3.4e-29 131.7 109 66.1
Atru.chr10.1858 Acer truncatum HOM05D007285 ORTHO05D009224 5.8e-29 131.0 105 70.5
Gorai.010G155100 Gossypium raimondii HOM05D007285 ORTHO05D009224 5.8e-29 131.0 99 74.7
TWI38G2229 Tripterygium wilfordii HOM05D007285 ORTHO05D009224 7.6e-29 130.6 103 69.9
Peaxi162Scf00623g00519 Petunia axillaris HOM05D007285 ORTHO05D009224 9.9e-29 130.2 108 66.7
Thecc.06G185100 Theobroma cacao HOM05D007285 ORTHO05D009224 9.9e-29 130.2 103 71.8
Ciclev10017252m.g Citrus clementina HOM05D007285 ORTHO05D009224 1.7e-28 129.4 96 77.1
Dinv17325 Davidia involucrata HOM05D007285 ORTHO05D009224 1.7e-28 129.4 107 68.2
unitig_27.g24965 Utricularia gibba HOM05D007285 ORTHO05D009224 1.7e-28 129.4 108 66.7
Gohir.D06G133300 Gossypium hirsutum HOM05D007285 ORTHO05D009224 2.2e-28 129.0 99 73.7
CiPaw.09G061300 Carya illinoinensis HOM05D007285 ORTHO05D009224 2.9e-28 128.6 110 64.5
CAN.G529.14 Capsicum annuum HOM05D007285 ORTHO05D009224 4.9e-28 127.9 103 68.9
Lsat_1_v5_gn_4_52261 Lactuca sativa HOM05D007285 ORTHO05D009224 4.9e-28 127.9 107 65.4
FAN25G3510 Fragaria x ananassa HOM05D007285 ORTHO05D009224 6.4e-28 127.5 94 72.3
Phvul.002G229600 Phaseolus vulgaris HOM05D007285 ORTHO05D009224 6.4e-28 127.5 102 70.6
HanXRQChr14g0435131 Helianthus annuus HOM05D007285 ORTHO05D009224 8.4e-28 127.1 99 70.7
Psat7g114520 Pisum sativum HOM05D007285 ORTHO05D009224 8.4e-28 127.1 97 74.2
VMungo0251G0987 Vigna mungo HOM05D007285 ORTHO05D009224 8.4e-28 127.1 102 70.6
FAN21G1653 Fragaria x ananassa HOM05D007285 ORTHO05D009224 1.1e-27 126.7 101 70.3
FvH4_3g08990 Fragaria vesca HOM05D007285 ORTHO05D009224 1.4e-27 126.3 102 69.6
FAN16G1611 Fragaria x ananassa HOM05D007285 ORTHO05D009224 1.4e-27 126.3 102 69.6
Manes.17G046800 Manihot esculenta HOM05D007285 ORTHO05D009224 2.4e-27 125.6 92 77.2
Lj4g0016922 Lotus japonicus HOM05D007285 ORTHO05D009224 3.2e-27 125.2 99 71.7
MD10G1292600 Malus domestica HOM05D007285 ORTHO05D009224 3.2e-27 125.2 98 68.4
Potri.004G045400 Populus trichocarpa HOM05D007285 ORTHO05D009224 4.2e-27 124.8 99 68.7
MD00G1116000 Malus domestica HOM05D007285 ORTHO05D009224 7.1e-27 124.0 98 67.3
RcHm_v2.0_Chr5g0008721 Rosa chinensis HOM05D007285 ORTHO05D009224 7.1e-27 124.0 100 70.0
Lalb_Chr15g0089751 Lupinus albus HOM05D007285 ORTHO05D009224 9.3e-27 123.6 102 69.6
Gohir.A06G129300 Gossypium hirsutum HOM05D007285 ORTHO05D009224 1.6e-26 122.9 99 70.7
Prupe.4G049200 Prunus persica HOM05D007285 ORTHO05D009224 2.1e-26 122.5 105 66.7
TWI63G1057 Tripterygium wilfordii HOM05D007285 ORTHO05D009224 2.7e-26 122.1 103 68.0
Glyma.07G198400 Glycine max HOM05D007285 ORTHO05D009224 3.5e-26 121.7 95 72.6
Glyma.13G178000 Glycine max HOM05D007285 ORTHO05D009224 6.0e-26 120.9 94 73.4
Hund23773 Selenicereus undatus HOM05D007285 ORTHO05D009224 6.0e-26 120.9 102 67.6
Sed0001788 Sechium edule HOM05D007285 ORTHO05D009224 1.0e-25 120.2 102 66.7
CsaV3_1G012400 Cucumis sativus L. HOM05D007285 ORTHO05D009224 1.8e-25 119.4 102 66.7
PGR042G2867 Punica granatum HOM05D007285 ORTHO05D009224 1.8e-25 119.4 98 68.4
ClCG03G008150 Citrullus lanatus HOM05D007285 ORTHO05D009224 2.3e-25 119.0 104 64.4
Nn1g04136 Nelumbo nucifera HOM05D007285 ORTHO05D009224 5.1e-25 117.9 102 62.7
Sed0014393 Sechium edule HOM05D007285 ORTHO05D009224 6.7e-25 117.5 104 63.5
Sc05g0007570 Simmondsia chinensis HOM05D007285 ORTHO05D009224 1.5e-24 116.3 95 66.3
Ah.09g237440 Amaranthus hybridus HOM05D007285 ORTHO05D009224 4.3e-24 114.8 104 60.6
EL10Ac8g20395 Beta vulgaris HOM05D007285 ORTHO05D009224 7.4e-24 114.0 104 62.5
PSO541G0778 Papaver somniferum HOM05D007285 ORTHO05D009224 9.6e-24 113.6 110 57.3
Carub.0001s2669 Capsella rubella HOM05D007285 ORTHO05D009224 1.6e-23 112.8 106 57.5
Aa31LG6G10160 Aethionema arabicum HOM05D007285 ORTHO05D009224 2.8e-23 112.1 101 60.4
AUR62017028 Chenopodium quinoa HOM05D007285 ORTHO05D009224 3.7e-23 111.7 103 63.1
AL1G41800 Arabidopsis lyrata HOM05D007285 ORTHO05D009224 8.2e-23 110.5 92 63.0
THA.LOC104820545 Tarenaya hassleriana HOM05D007285 ORTHO05D009224 8.2e-23 110.5 105 60.0
CARHR027740 Cardamine hirsuta HOM05D007285 ORTHO05D009224 2.4e-22 109.0 99 59.6
TAR626G1757 Trochodendron aralioides HOM05D007285 ORTHO05D009224 2.4e-22 109.0 103 59.2
AT1G28250 Arabidopsis thaliana HOM05D007285 ORTHO05D009224 3.1e-22 108.6 96 61.5
PGSC0003DMG401029703 Solanum tuberosum HOM05D007285 ORTHO05D009224 1.2e-21 106.7 97 63.9
BolC3t19748H Brassica oleracea HOM05D007285 ORTHO05D009224 2.6e-21 105.5 92 60.9
Eucgr.E03264 Eucalyptus grandis HOM05D007285 ORTHO05D009224 3.4e-21 105.1 98 61.2
HPP92_007016 Vanilla planifolia HOM05D007285 ORTHO05D009224 1.3e-20 103.2 106 53.8
Haze_06424 Corylus avellana HOM05D007285 ORTHO05D009224 1.7e-20 102.8 82 73.2
BcaB07g32433 Brassica carinata HOM05D007285 ORTHO05D009224 4.9e-20 101.3 101 53.5
A09p37820 Brassica napus HOM05D007285 ORTHO05D009224 6.5e-20 100.9 96 58.3
BraA09t39294Z Brassica rapa HOM05D007285 ORTHO05D009224 6.5e-20 100.9 96 58.3
CDE01G0551 Ceratophyllum demersum HOM05D007285 ORTHO05D009224 6.5e-20 100.9 97 53.6
vmacro15913 Vaccinium macrocarpon HOM05D007285 ORTHO05D009224 6.5e-20 100.9 71 76.1
BcaC05g26830 Brassica carinata HOM05D007285 ORTHO05D009224 8.4e-20 100.5 96 58.3
C05p27060 Brassica napus HOM05D007285 ORTHO05D009224 1.4e-19 99.8 96 57.3
Thhalv10009792m.g Eutrema salsugineum HOM05D007285 ORTHO05D009224 1.9e-19 99.4 110 52.7
ECA234G4273 Erigeron canadensis HOM05D007285 ORTHO05D009224 3.2e-19 98.6 83 69.9
CANSAT35G0751 Cannabis sativa HOM05D007285 ORTHO05D009224 5.5e-19 97.8 112 53.6
Zm00001eb305570 Zea mays HOM05D007285 ORTHO05D009224 5.5e-19 97.8 95 54.7
Sabra04G0028300 Salix brachista HOM05D007285 ORTHO05D009224 7.1e-19 97.4 144 45.1
ATR0763G085 Amborella trichopoda HOM05D007285 ORTHO05D009224 9.3e-19 97.1 112 53.6
QL05p041285 Quercus lobata HOM05D007285 ORTHO05D009224 9.3e-19 97.1 79 70.9
SalBow8G3155 Salvia bowleyana HOM05D007285 ORTHO05D009224 9.3e-19 97.1 60 88.3
DCAR_004065 Daucus carota HOM05D007285 ORTHO05D009224 1.2e-18 96.7 71 74.6
BcaC01g00030 Brassica carinata HOM05D007285 ORTHO05D009224 5.1e-17 91.3 118 47.5
BolC5t31425H Brassica oleracea HOM05D007285 ORTHO05D009224 5.1e-17 91.3 114 50.0
SEGI_38595 Sequoiadendron giganteum HOM05D007285 ORTHO05D009224 4.3e-16 88.2 100 51.0
MELO3C002614.2 Cucumis melo HOM05D007285 ORTHO05D009224 1.6e-15 86.3 69 69.6
BcaB03g12118 Brassica carinata HOM05D007285 ORTHO05D009224 1.4e-14 83.2 71 60.6
Os07g0299600 Oryza sativa ssp. japonica HOM05D007285 ORTHO05D009224 2.6e-13 79.0 82 52.4
Pp3c8_510 Physcomitrium patens HOM05D007285 ORTHO05D009224 1.3e-12 76.6 103 46.6
Mapoly0007s0165 Marchantia polymorpha HOM05D007285 ORTHO05D009224 1.1e-11 73.6 87 49.4
C03p74970 Brassica napus HOM05D007285 ORTHO05D009224 1.0e-09 67.0 99 42.4
CDE12G0235 Ceratophyllum demersum HOM05D007285 ORTHO05D009224 1.8e-09 66.2 97 43.3
SMO229G0021 Selaginella moellendorffii HOM05D007397 ORTHO05D009336 1.1e-08 63.5 84 47.6


User provided reference genes

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