Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold100G29662 Striga asiatica HOM05D012911 ORTHO05D010595 1.3e-165 586.3 285 100.0
SGA_v2.0_scaffold100G29614 Striga asiatica HOM05D012911 ORTHO05D010595 7.8e-102 374.4 249 77.1
SGA_v2.0_scaffold100G29617 Striga asiatica HOM05D012911 ORTHO05D010595 2.5e-100 369.4 238 78.2
SGA_v2.0_scaffold100G29621 Striga asiatica HOM05D012911 ORTHO05D010595 2.5e-84 316.2 240 66.2
SGA_v2.0_scaffold7G04003 Striga asiatica HOM05D012911 ORTHO05D010595 3.9e-29 132.9 225 40.0
SGA_v2.0_scaffold16G07514 Striga asiatica HOM05D012911 ORTHO05D010595 2.0e-28 130.6 196 42.3
SGA_v2.0_scaffold131G34426 Striga asiatica HOM05D000096 ORTHO05D010595 8.5e-24 115.2 194 39.2
SGA_v2.0_scaffold1G00248 Striga asiatica HOM05D011185 ORTHO05D010595 1.4e-23 114.4 223 32.7
SGA_v2.0_scaffold7G03853 Striga asiatica HOM05D012911 ORTHO05D010595 8.0e-22 108.6 257 36.6
SGA_v2.0_scaffold1G00255 Striga asiatica HOM05D011185 ORTHO05D010595 1.0e-21 108.2 223 33.6
SGA_v2.0_scaffold1G00250 Striga asiatica HOM05D011185 ORTHO05D010595 1.4e-21 107.8 223 32.3
SGA_v2.0_scaffold7G03939 Striga asiatica HOM05D012911 ORTHO05D010595 1.4e-21 107.8 251 32.7
SGA_v2.0_scaffold7G03729 Striga asiatica HOM05D012724 ORTHO05D010595 1.5e-20 104.4 249 32.1
SGA_v2.0_scaffold40G15638 Striga asiatica HOM05D011185 ORTHO05D010595 2.6e-20 103.6 227 33.5
SGA_v2.0_scaffold130G34213 Striga asiatica HOM05D030202 ORTHO05D010595 3.3e-20 103.2 220 32.7
SGA_v2.0_scaffold181G39784 Striga asiatica HOM05D017978 ORTHO05D010595 3.3e-20 103.2 207 35.3
SGA_v2.0_scaffold659G53394 Striga asiatica HOM05D012911 ORTHO05D010595 3.3e-20 103.2 141 45.4
SGA_v2.0_scaffold8G04360 Striga asiatica HOM05D011185 ORTHO05D010595 7.4e-20 102.1 247 30.8
SGA_v2.0_scaffold90G27929 Striga asiatica HOM05D012724 ORTHO05D010595 7.4e-20 102.1 240 33.8
SGA_v2.0_scaffold7G03555 Striga asiatica HOM05D012911 ORTHO05D010595 9.7e-20 101.7 245 31.4
SGA_v2.0_scaffold117G32318 Striga asiatica HOM05D011185 ORTHO05D010595 1.3e-19 101.3 221 34.4
SGA_v2.0_scaffold90G27930 Striga asiatica HOM05D012724 ORTHO05D010595 6.3e-19 99.0 227 32.6
SGA_v2.0_scaffold24G10254 Striga asiatica HOM05D011185 ORTHO05D010595 4.1e-18 96.3 240 32.1
SGA_v2.0_scaffold90G27927 Striga asiatica HOM05D012724 ORTHO05D010595 7.0e-18 95.5 248 31.5
SGA_v2.0_scaffold181G39793 Striga asiatica HOM05D017978 ORTHO05D010595 1.6e-17 94.4 205 33.7
SGA_v2.0_scaffold40G15666 Striga asiatica HOM05D011185 ORTHO05D010595 1.6e-17 94.4 228 32.5
SGA_v2.0_scaffold366G50043 Striga asiatica HOM05D011185 ORTHO05D010595 2.0e-17 94.0 189 34.4
SGA_v2.0_scaffold90G27918 Striga asiatica HOM05D012724 ORTHO05D010595 2.6e-17 93.6 225 33.3
SGA_v2.0_scaffold7G03938 Striga asiatica HOM05D012911 ORTHO05D010595 5.9e-17 92.4 183 36.1
SGA_v2.0_scaffold181G39796 Striga asiatica HOM05D017978 ORTHO05D010595 6.5e-16 89.0 212 32.5
SGA_v2.0_scaffold20G09149 Striga asiatica HOM05D011185 ORTHO05D010595 9.4e-15 85.1 217 32.7
SGA_v2.0_scaffold3G01637 Striga asiatica HOM05D003583 ORTHO05D004169 2.1e-14 84.0 196 33.2
TWI60G1487 Tripterygium wilfordii HOM05D000007 ORTHO05D000039 4.7e-14 82.8 244 29.9
SGA_v2.0_scaffold152G36797 Striga asiatica HOM05D011185 ORTHO05D010595 6.8e-13 79.0 233 29.6
Thecc.09G278300 Theobroma cacao HOM05D000007 ORTHO05D000039 1.5e-12 77.8 251 29.5
TWI60G0485 Tripterygium wilfordii HOM05D000007 ORTHO05D000039 1.5e-12 77.8 224 28.6
SGA_v2.0_scaffold7G03932 Striga asiatica HOM05D000002 ORTHO05D010595 2.6e-12 77.0 166 30.7
SGA_v2.0_scaffold7G04012 Striga asiatica HOM05D000449 ORTHO05D010595 3.4e-12 76.6 118 38.1
SGA_v2.0_scaffold1G00259 Striga asiatica HOM05D011185 ORTHO05D010595 4.4e-12 76.3 233 28.8
SGA_v2.0_scaffold181G39791 Striga asiatica HOM05D011185 ORTHO05D010595 5.7e-12 75.9 250 29.6
Gohir.A10G143700 Gossypium hirsutum HOM05D000007 ORTHO05D000039 9.7e-12 75.1 229 28.8
Gorai.011G135900 Gossypium raimondii HOM05D000007 ORTHO05D000039 3.7e-11 73.2 229 27.1
COL.COLO4_22623 Corchorus olitorius HOM05D000007 ORTHO05D000039 1.1e-10 71.6 228 27.2
Gohir.D10G241100 Gossypium hirsutum HOM05D000007 ORTHO05D000039 1.1e-10 71.6 236 27.5
Gohir.D10G123400 Gossypium hirsutum HOM05D000007 ORTHO05D000039 1.4e-10 71.2 230 28.3
Gorai.011G276100 Gossypium raimondii HOM05D000007 ORTHO05D000039 1.4e-10 71.2 236 27.1
SGA_v2.0_scaffold181G39794 Striga asiatica HOM05D017978 ORTHO05D010595 2.4e-10 70.5 199 30.7
TWI60G0843 Tripterygium wilfordii HOM05D000007 ORTHO05D000039 4.1e-10 69.7 246 27.2
Gohir.A10G227500 Gossypium hirsutum HOM05D000007 ORTHO05D000039 5.3e-10 69.3 230 27.4
TWI81G0699 Tripterygium wilfordii HOM05D000007 ORTHO05D000039 5.3e-10 69.3 248 27.0
TWI31G1434 Tripterygium wilfordii HOM05D000007 ORTHO05D000039 7.0e-10 68.9 238 27.7
Gorai.011G276900 Gossypium raimondii HOM05D000007 ORTHO05D000039 9.1e-10 68.6 265 27.5
Solyc01g055160.1 Solanum lycopersicum HOM05D000007 ORTHO05D000039 9.1e-10 68.6 160 27.5
CiPaw.14G019500 Carya illinoinensis HOM05D000007 ORTHO05D000039 1.6e-09 67.8 222 25.7
TWI34G1066 Tripterygium wilfordii HOM05D000007 ORTHO05D000039 3.5e-09 66.6 256 26.6
MBI17_g24693_MAGBIO Magnolia biondii HOM05D000007 ORTHO05D000521 1.7e-08 64.3 189 28.6
SalBow6G1123 Salvia bowleyana HOM05D012950 ORTHO05D005165 1.7e-08 64.3 224 29.9
EL10As6g23638 Beta vulgaris HOM05D000007 ORTHO05D000017 2.2e-08 63.9 236 26.7
Gorai.011G136300 Gossypium raimondii HOM05D000007 ORTHO05D000039 2.2e-08 63.9 189 29.6
Nn2g13281 Nelumbo nucifera HOM05D000007 ORTHO05D000017 2.2e-08 63.9 152 32.9
Medtr5g096910 Medicago truncatula HOM05D000007 ORTHO05D000039 5.0e-08 62.8 233 27.5
TWI59G1185 Tripterygium wilfordii HOM05D000007 ORTHO05D000039 8.5e-08 62.0 238 26.9
Haze_06943 Corylus avellana HOM05D000007 ORTHO05D000017 1.1e-07 61.6 129 29.5
CSS0018234 Camellia sinensis var. sinensis HOM05D000007 ORTHO05D000039 1.5e-07 61.2 217 28.1
Gorai.011G276600 Gossypium raimondii HOM05D000007 ORTHO05D000039 1.5e-07 61.2 192 27.1
Oeu025158.1 Olea europaea HOM05D000007 ORTHO05D000039 1.5e-07 61.2 239 27.6
Haze_02867 Corylus avellana HOM05D000007 ORTHO05D000039 1.9e-07 60.8 158 31.6
QL04p029107 Quercus lobata HOM05D000007 ORTHO05D000039 2.5e-07 60.5 221 24.4
Gohir.D08G107300 Gossypium hirsutum HOM05D000007 ORTHO05D000039 3.2e-07 60.1 260 25.8
Gorai.004G114700 Gossypium raimondii HOM05D000007 ORTHO05D000039 3.2e-07 60.1 260 25.8
RcHm_v2.0_Chr1g0321721 Rosa chinensis HOM05D000007 ORTHO05D000039 4.2e-07 59.7 234 26.1
AUR62012546 Chenopodium quinoa HOM05D000007 ORTHO05D000017 5.5e-07 59.3 158 26.6
Ciclev10011921m.g Citrus clementina HOM05D000007 ORTHO05D000039 5.5e-07 59.3 197 25.4
FAN08G0171 Fragaria x ananassa HOM05D003981 ORTHO05D003666 5.5e-07 59.3 148 33.8
Peaxi162Scf00047g00844 Petunia axillaris HOM05D000007 ORTHO05D000017 5.5e-07 59.3 132 31.1
CANSAT64G2524 Cannabis sativa HOM05D000007 ORTHO05D000039 7.2e-07 58.9 153 30.1
Gohir.A08G096400 Gossypium hirsutum HOM05D000007 ORTHO05D000039 7.2e-07 58.9 260 25.4
Ciclev10028647m.g Citrus clementina HOM05D000007 ORTHO05D000039 1.2e-06 58.2 172 27.3
Duzib168G0318 Durio zibethinus HOM05D000007 ORTHO05D000017 1.6e-06 57.8 159 27.0
Gohir.D10G123300 Gossypium hirsutum HOM05D000007 ORTHO05D000039 1.6e-06 57.8 179 28.5
MD09G1130700 Malus domestica HOM05D000007 ORTHO05D000039 2.1e-06 57.4 230 25.7
Oeu025157.1 Olea europaea HOM05D000007 ORTHO05D000039 2.1e-06 57.4 126 31.7
RcHm_v2.0_Chr5g0028051 Rosa chinensis HOM05D000007 ORTHO05D000039 2.1e-06 57.4 157 32.5
AT2G17830 Arabidopsis thaliana HOM05D000209 ORTHO05D000129 2.7e-06 57.0 149 30.2
Cfa000428 Carpinus fangiana HOM05D000007 ORTHO05D000039 2.7e-06 57.0 240 25.0
PSO478G2419 Papaver somniferum HOM05D000007 ORTHO05D000017 2.7e-06 57.0 238 26.5
FAN04G2111 Fragaria x ananassa HOM05D003981 ORTHO05D003666 3.6e-06 56.6 145 32.4
Manes.01G182601 Manihot esculenta HOM05D000007 ORTHO05D000039 3.6e-06 56.6 248 22.6
SalBow6G4569 Salvia bowleyana HOM05D012950 ORTHO05D005165 3.6e-06 56.6 224 28.1
Dinv21276 Davidia involucrata HOM05D000007 ORTHO05D000039 4.7e-06 56.2 242 23.1
TWI31G0323 Tripterygium wilfordii HOM05D000007 ORTHO05D000039 4.7e-06 56.2 242 25.6
Aqoxy3G01256 Aquilegia oxysepala HOM05D000007 ORTHO05D000521 6.1e-06 55.8 174 28.2
Lalb_Chr01g0007641 Lupinus albus HOM05D000007 ORTHO05D000039 6.1e-06 55.8 187 27.3
RcHm_v2.0_Chr3g0456241 Rosa chinensis HOM05D000007 ORTHO05D000039 8.0e-06 55.5 225 24.4


User provided reference genes

Program Settings