Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold100G29660 Striga asiatica HOM05D004441 ORTHO05D003109 7.0e-142 507.3 260 100.0
SGA_v2.0_scaffold22G09746 Striga asiatica HOM05D004441 ORTHO05D003109 3.5e-48 196.1 232 55.2
SalBow8G3623 Salvia bowleyana HOM05D004441 ORTHO05D003109 4.2e-46 189.1 266 51.9
SalBow8G4382 Salvia bowleyana HOM05D004441 ORTHO05D003109 4.2e-46 189.1 266 51.9
Migut.M01162 Erythranthe guttata HOM05D004441 ORTHO05D003109 1.0e-36 157.9 279 45.5
Nitab4.5_0001820g0050 Nicotiana tabacum HOM05D004441 ORTHO05D003109 1.7e-31 140.6 259 44.8
Nitab4.5_0007319g0010 Nicotiana tabacum HOM05D004441 ORTHO05D003109 7.2e-30 135.2 256 42.6
Oeu026007.1 Olea europaea HOM05D004441 ORTHO05D003109 1.2e-29 134.4 271 41.0
Cc00_g11510 Coffea canephora HOM05D004441 ORTHO05D003109 2.1e-29 133.7 274 39.1
Solyc02g078760.1 Solanum lycopersicum HOM05D004441 ORTHO05D003109 1.2e-24 117.9 258 41.9
Oeu029188.1 Olea europaea HOM05D004441 ORTHO05D003109 2.5e-22 110.2 269 36.4
PGSC0003DMG400022372 Solanum tuberosum HOM05D004441 ORTHO05D003109 4.3e-22 109.4 261 38.3
Sopen02g023590 Solanum pennellii HOM05D004441 ORTHO05D003109 1.6e-21 107.5 258 39.1
Hma1.2p1_0191F.1_g083410 Hydrangea macrophylla HOM05D004441 ORTHO05D003109 1.4e-20 104.4 258 39.9
Hma1.2p1_2209F.1_g317155 Hydrangea macrophylla HOM05D004441 ORTHO05D003109 1.4e-20 104.4 258 39.9
VMungo0540G1643 Vigna mungo HOM05D004441 ORTHO05D003109 1.5e-19 100.9 268 37.3
Peaxi162Scf00612g00043 Petunia axillaris HOM05D004441 ORTHO05D003109 3.4e-19 99.8 258 36.4
Dinv40519 Davidia involucrata HOM05D004441 ORTHO05D003109 5.8e-19 99.0 260 39.2
Lj1A1210T53 Lonicera japonica HOM05D004441 ORTHO05D003109 4.9e-18 95.9 261 37.2
Sc17g0006420 Simmondsia chinensis HOM05D004441 ORTHO05D003109 1.1e-17 94.7 286 39.5
Dinv39787 Davidia involucrata HOM05D004441 ORTHO05D003109 4.1e-17 92.8 275 35.3
Phvul.006G189700 Phaseolus vulgaris HOM05D004441 ORTHO05D003109 1.3e-15 87.8 266 36.1
Ca_00297_v3 Cicer arietinum L. HOM05D004441 ORTHO05D003109 8.6e-15 85.1 275 37.5
Psat1g207120 Pisum sativum HOM05D004441 ORTHO05D003109 1.5e-14 84.3 276 37.3
Actinidia05598 Actinidia chinensis HOM05D004441 ORTHO05D003109 4.3e-14 82.8 218 40.8
TAR626G0020 Trochodendron aralioides HOM05D004441 ORTHO05D003109 5.6e-14 82.4 280 33.6
Prupe.4G040000 Prunus persica HOM05D004441 ORTHO05D003109 1.6e-13 80.9 311 32.5
Medtr2g012750 Medicago truncatula HOM05D004441 ORTHO05D003109 4.7e-13 79.3 273 34.8
Hma1.2p1_0835F.1_g225850 Hydrangea macrophylla HOM05D004441 ORTHO05D003109 1.1e-12 78.2 260 33.8
Hma1.2p1_0835F.1_g225855 Hydrangea macrophylla HOM05D004441 ORTHO05D003109 1.1e-12 78.2 260 33.8
CiPaw.09G160900 Carya illinoinensis HOM05D004441 ORTHO05D003109 1.4e-12 77.8 271 32.8
DCAR_004123 Daucus carota HOM05D004441 ORTHO05D003109 5.2e-12 75.9 278 35.3
Glyma.15G069600 Glycine max HOM05D004441 ORTHO05D003109 1.2e-11 74.7 235 35.3
Rhsim13G0175700 Rhododendron simsii HOM05D004441 ORTHO05D003109 1.2e-11 74.7 278 33.8
TAR629G3100 Trochodendron aralioides HOM05D004441 ORTHO05D003109 2.0e-11 73.9 286 34.6
TPR.G36719 Trifolium pratense HOM05D004441 ORTHO05D003109 2.6e-11 73.6 275 34.5
Glyma.13G244100 Glycine max HOM05D004441 ORTHO05D003109 4.4e-11 72.8 273 34.1
arahy.Tifrunner.gnm1.ann1.KXRU9A Arachis hypogaea HOM05D004441 ORTHO05D003109 1.7e-10 70.9 277 34.3
Lsat_1_v5_gn_4_55461 Lactuca sativa HOM05D004441 ORTHO05D003109 2.2e-10 70.5 270 35.2
Thecc.06G194800 Theobroma cacao HOM05D004441 ORTHO05D003109 3.7e-10 69.7 257 35.4
TWI63G0258 Tripterygium wilfordii HOM05D004441 ORTHO05D003109 3.7e-10 69.7 278 36.0
Manes.17G041200 Manihot esculenta HOM05D004441 ORTHO05D003109 8.3e-10 68.6 307 30.6
Ciclev10015894m.g Citrus clementina HOM05D004441 ORTHO05D003109 1.1e-09 68.2 271 34.3
Lj6g0023239 Lotus japonicus HOM05D004441 ORTHO05D003109 1.1e-09 68.2 280 32.1
MD10G1300500 Malus domestica HOM05D004441 ORTHO05D003109 1.4e-09 67.8 317 31.9
Lj1A733T64 Lonicera japonica HOM05D009304 ORTHO05D003109 2.4e-09 67.0 273 34.4
RcHm_v2.0_Chr5g0007441 Rosa chinensis HOM05D004441 ORTHO05D003109 5.4e-09 65.9 298 29.9
Gohir.A05G163400 Gossypium hirsutum HOM05D004441 ORTHO05D003109 9.2e-09 65.1 290 32.4
Duzib160G0195 Durio zibethinus HOM05D004441 ORTHO05D003109 1.2e-08 64.7 288 33.7
Gorai.009G171500 Gossypium raimondii HOM05D004441 ORTHO05D003109 1.2e-08 64.7 286 32.2
FAN25G3261 Fragaria x ananassa HOM05D004441 ORTHO05D003109 2.1e-08 63.9 283 31.4
Lsat_1_v5_gn_7_20000 Lactuca sativa HOM05D004441 ORTHO05D003109 2.1e-08 63.9 270 34.8
COL.COLO4_31538 Corchorus olitorius HOM05D004441 ORTHO05D003109 3.5e-08 63.2 294 31.6
MBI18_g13205_MAGBIO Magnolia biondii HOM05D004441 ORTHO05D003109 4.6e-08 62.8 277 29.6
Gohir.D05G166400 Gossypium hirsutum HOM05D004441 ORTHO05D003109 6.0e-08 62.4 290 31.7
PGR004G2153 Punica granatum HOM05D004441 ORTHO05D003109 1.7e-07 60.8 306 34.0
PSO675G8062 Papaver somniferum HOM05D004441 ORTHO05D003109 2.3e-07 60.5 313 33.2
FAN11G1619 Fragaria x ananassa HOM05D004441 ORTHO05D003109 3.9e-07 59.7 271 32.1
FAN16G1227 Fragaria x ananassa HOM05D004441 ORTHO05D003109 3.9e-07 59.7 285 31.6
Migut.H01500 Erythranthe guttata HOM05D004441 ORTHO05D003109 6.6e-07 58.9 96 44.8
Cc05_g06660 Coffea canephora HOM05D009304 ORTHO05D003109 8.6e-07 58.5 258 33.7
Duzib192G0975 Durio zibethinus HOM05D004441 ORTHO05D003109 8.6e-07 58.5 289 32.2
Aqoxy1G02647 Aquilegia oxysepala HOM05D004441 ORTHO05D003109 1.5e-06 57.8 276 33.3
arahy.Tifrunner.gnm1.ann1.W0S7NR Arachis hypogaea HOM05D004441 ORTHO05D003109 1.5e-06 57.8 166 38.0
FvH4_3g04520 Fragaria vesca HOM05D004441 ORTHO05D003109 4.3e-06 56.2 280 31.1
ClCG03G005640 Citrullus lanatus HOM05D004441 ORTHO05D003109 7.3e-06 55.5 263 33.5
MELO3C007307.2 Cucumis melo HOM05D004441 ORTHO05D003109 7.3e-06 55.5 264 31.1
Dinv23691 Davidia involucrata HOM05D009304 ORTHO05D003109 7.3e-06 55.5 273 34.4


User provided reference genes

Program Settings