Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold100G29621 Striga asiatica HOM05D012911 ORTHO05D010595 5.5e-217 757.3 370 100.0
SGA_v2.0_scaffold100G29617 Striga asiatica HOM05D012911 ORTHO05D010595 5.7e-145 518.1 371 70.1
SGA_v2.0_scaffold100G29614 Striga asiatica HOM05D012911 ORTHO05D010595 7.4e-145 517.7 382 68.6
SGA_v2.0_scaffold100G29662 Striga asiatica HOM05D012911 ORTHO05D010595 1.5e-84 317.4 240 66.2
SGA_v2.0_scaffold7G04003 Striga asiatica HOM05D012911 ORTHO05D010595 4.2e-39 166.4 373 34.3
SGA_v2.0_scaffold131G34426 Striga asiatica HOM05D000096 ORTHO05D010595 3.3e-36 156.8 293 33.8
SGA_v2.0_scaffold1G00248 Striga asiatica HOM05D011185 ORTHO05D010595 3.4e-33 146.7 376 29.5
SGA_v2.0_scaffold16G07514 Striga asiatica HOM05D012911 ORTHO05D010595 4.5e-33 146.4 230 39.6
SGA_v2.0_scaffold1G00250 Striga asiatica HOM05D011185 ORTHO05D010595 4.9e-32 142.9 382 28.5
SGA_v2.0_scaffold1G00255 Striga asiatica HOM05D011185 ORTHO05D010595 1.4e-31 141.4 394 28.9
SGA_v2.0_scaffold90G27930 Striga asiatica HOM05D012724 ORTHO05D010595 2.5e-28 130.6 267 34.1
SGA_v2.0_scaffold40G15638 Striga asiatica HOM05D011185 ORTHO05D010595 3.1e-26 123.6 269 33.8
SGA_v2.0_scaffold7G03729 Striga asiatica HOM05D012724 ORTHO05D010595 3.4e-25 120.2 258 34.1
SGA_v2.0_scaffold117G32318 Striga asiatica HOM05D011185 ORTHO05D010595 1.3e-24 118.2 334 30.5
SGA_v2.0_scaffold90G27927 Striga asiatica HOM05D012724 ORTHO05D010595 1.3e-24 118.2 282 32.6
SGA_v2.0_scaffold7G03853 Striga asiatica HOM05D012911 ORTHO05D010595 1.7e-24 117.9 265 34.3
SGA_v2.0_scaffold24G10254 Striga asiatica HOM05D011185 ORTHO05D010595 3.8e-24 116.7 299 32.8
SGA_v2.0_scaffold181G39791 Striga asiatica HOM05D011185 ORTHO05D010595 5.0e-24 116.3 269 33.1
SGA_v2.0_scaffold659G53394 Striga asiatica HOM05D012911 ORTHO05D010595 8.4e-24 115.5 230 36.1
SGA_v2.0_scaffold366G50043 Striga asiatica HOM05D011185 ORTHO05D010595 1.4e-23 114.8 268 32.8
SGA_v2.0_scaffold84G26553 Striga asiatica HOM05D012911 ORTHO05D010595 1.9e-23 114.4 251 32.3
SGA_v2.0_scaffold8G04360 Striga asiatica HOM05D011185 ORTHO05D010595 3.2e-23 113.6 302 31.8
SGA_v2.0_scaffold90G27918 Striga asiatica HOM05D012724 ORTHO05D010595 7.2e-23 112.5 257 32.7
SGA_v2.0_scaffold181G39784 Striga asiatica HOM05D017978 ORTHO05D010595 4.6e-22 109.8 243 32.5
SGA_v2.0_scaffold40G15666 Striga asiatica HOM05D011185 ORTHO05D010595 7.9e-22 109.0 270 32.6
SGA_v2.0_scaffold90G27929 Striga asiatica HOM05D012724 ORTHO05D010595 1.0e-21 108.6 261 33.3
SGA_v2.0_scaffold130G34213 Striga asiatica HOM05D030202 ORTHO05D010595 1.3e-21 108.2 262 31.3
SGA_v2.0_scaffold20G09149 Striga asiatica HOM05D011185 ORTHO05D010595 1.3e-21 108.2 247 30.8
SGA_v2.0_scaffold1G00259 Striga asiatica HOM05D011185 ORTHO05D010595 3.0e-21 107.1 409 27.6
COL.COLO4_22623 Corchorus olitorius HOM05D000007 ORTHO05D000039 1.1e-20 105.1 330 29.4
Duzib150G0476 Durio zibethinus HOM05D000007 ORTHO05D000039 2.5e-20 104.0 253 29.2
SGA_v2.0_scaffold7G03555 Striga asiatica HOM05D012911 ORTHO05D010595 1.3e-19 101.7 255 30.2
Thecc.09G278300 Theobroma cacao HOM05D000007 ORTHO05D000039 1.3e-19 101.7 255 30.2
Gorai.011G135900 Gossypium raimondii HOM05D000007 ORTHO05D000039 1.6e-19 101.3 256 30.5
SGA_v2.0_scaffold84G26560 Striga asiatica HOM05D012911 ORTHO05D010595 1.4e-18 98.2 264 28.8
Gohir.D10G123400 Gossypium hirsutum HOM05D000007 ORTHO05D000039 1.8e-18 97.8 257 30.4
Gohir.A10G143700 Gossypium hirsutum HOM05D000007 ORTHO05D000039 3.1e-18 97.1 254 30.3
Gorai.011G136300 Gossypium raimondii HOM05D000007 ORTHO05D000039 1.2e-17 95.1 245 31.0
Gohir.D10G241100 Gossypium hirsutum HOM05D000007 ORTHO05D000039 7.7e-17 92.4 270 29.6
SGA_v2.0_scaffold3G01637 Striga asiatica HOM05D003583 ORTHO05D004169 2.2e-16 90.9 186 33.9
Gohir.D10G241600 Gossypium hirsutum HOM05D000007 ORTHO05D000039 1.9e-15 87.8 243 29.6
Gorai.011G281100 Gossypium raimondii HOM05D000007 ORTHO05D000039 3.2e-15 87.0 243 28.8
AUR62017742 Chenopodium quinoa HOM05D000007 ORTHO05D000039 5.5e-15 86.3 253 28.1
Gohir.A10G227500 Gossypium hirsutum HOM05D000007 ORTHO05D000039 3.6e-14 83.6 243 28.4
TWI59G0519 Tripterygium wilfordii HOM05D000007 ORTHO05D000039 4.6e-14 83.2 272 29.4
TWI31G1434 Tripterygium wilfordii HOM05D000007 ORTHO05D000039 1.4e-13 81.6 229 28.8
TWI59G1185 Tripterygium wilfordii HOM05D000007 ORTHO05D000039 2.3e-13 80.9 275 27.3
Gohir.A10G227601 Gossypium hirsutum HOM05D000007 ORTHO05D000039 3.9e-13 80.1 264 27.3
SGA_v2.0_scaffold7G03938 Striga asiatica HOM05D012911 ORTHO05D010595 3.9e-13 80.1 149 35.6
SGA_v2.0_scaffold7G04012 Striga asiatica HOM05D000449 ORTHO05D010595 5.1e-13 79.7 227 30.0
AUR62031045 Chenopodium quinoa HOM05D000007 ORTHO05D000039 2.0e-12 77.8 255 26.7
Gohir.D10G240616 Gossypium hirsutum HOM05D000007 ORTHO05D000039 4.3e-12 76.6 259 26.3
Gohir.D10G241300 Gossypium hirsutum HOM05D000007 ORTHO05D000039 4.3e-12 76.6 259 26.3
Gohir.D10G123300 Gossypium hirsutum HOM05D000007 ORTHO05D000039 7.4e-12 75.9 208 29.8
Gohir.A10G227233 Gossypium hirsutum HOM05D000007 ORTHO05D000039 2.2e-11 74.3 236 28.8
Ca_22994_v3 Cicer arietinum L. HOM05D000007 ORTHO05D000039 2.8e-11 73.9 255 25.5
Ca_31000_v3 Cicer arietinum L. HOM05D000007 ORTHO05D000039 2.8e-11 73.9 255 25.5
SGA_v2.0_scaffold7G03932 Striga asiatica HOM05D000002 ORTHO05D010595 8.2e-11 72.4 157 33.1
EL10Ac9g22940 Beta vulgaris HOM05D000007 ORTHO05D000039 1.4e-10 71.6 261 26.1
Gohir.D10G240608 Gossypium hirsutum HOM05D000007 ORTHO05D000039 1.4e-10 71.6 208 28.8
Gorai.011G276500 Gossypium raimondii HOM05D000007 ORTHO05D000039 1.8e-10 71.2 264 26.9
PSO478G4558 Papaver somniferum HOM05D000007 ORTHO05D000017 1.8e-10 71.2 280 25.4
Duzib114G0761 Durio zibethinus HOM05D000007 ORTHO05D000039 2.4e-10 70.9 240 24.2
SGA_v2.0_scaffold16G07511 Striga asiatica HOM05D000007 ORTHO05D000039 5.3e-10 69.7 244 26.2
Manes.04G093401 Manihot esculenta HOM05D000007 ORTHO05D000039 6.9e-10 69.3 273 27.5
Haze_02864 Corylus avellana HOM05D000007 ORTHO05D000039 9.1e-10 68.9 205 26.8
RcHm_v2.0_Chr2g0095711 Rosa chinensis HOM05D000007 ORTHO05D000039 1.5e-09 68.2 229 27.9
CAN.G475.39 Capsicum annuum HOM05D000007 ORTHO05D000039 2.6e-09 67.4 264 24.6
Ciclev10028647m.g Citrus clementina HOM05D000007 ORTHO05D000039 2.6e-09 67.4 215 27.9
Gorai.011G276600 Gossypium raimondii HOM05D000007 ORTHO05D000039 2.6e-09 67.4 161 31.1
TWI59G1353 Tripterygium wilfordii HOM05D000007 ORTHO05D000039 3.4e-09 67.0 260 27.3
TWI79G0220 Tripterygium wilfordii HOM05D000007 ORTHO05D000039 3.4e-09 67.0 230 26.1
Glyma.19G081500 Glycine max HOM05D000007 ORTHO05D000039 4.5e-09 66.6 265 26.0
Gohir.D10G241400 Gossypium hirsutum HOM05D000007 ORTHO05D000039 4.5e-09 66.6 161 31.1
Peaxi162Scf01439g00001 Petunia axillaris HOM05D000007 ORTHO05D000039 4.5e-09 66.6 258 27.9
Nitab4.5_0006627g0010 Nicotiana tabacum HOM05D000007 ORTHO05D000039 7.7e-09 65.9 290 26.2
Lj5P838T12 Lonicera japonica HOM05D000007 ORTHO05D000039 1.7e-08 64.7 276 27.2
TWI59G0999 Tripterygium wilfordii HOM05D000007 ORTHO05D000039 1.7e-08 64.7 256 27.0
TWI79G1037 Tripterygium wilfordii HOM05D000007 ORTHO05D000039 1.7e-08 64.7 230 25.7
Ca_14677_v3 Cicer arietinum L. HOM05D000007 ORTHO05D000039 2.2e-08 64.3 257 23.3
RcHm_v2.0_Chr1g0344471 Rosa chinensis HOM05D000007 ORTHO05D000039 2.2e-08 64.3 186 28.0
Ca_02472_v3 Cicer arietinum L. HOM05D000007 ORTHO05D000039 3.8e-08 63.5 233 23.2
Thecc.10G168100 Theobroma cacao HOM05D000007 ORTHO05D000039 3.8e-08 63.5 253 25.7
Cpa.g.sc17.141 Carica papaya HOM05D000007 ORTHO05D000039 5.0e-08 63.2 260 25.0
PSO135G0864 Papaver somniferum HOM05D000007 ORTHO05D000039 1.1e-07 62.0 236 25.8
RcHm_v2.0_Chr2g0096811 Rosa chinensis HOM05D000007 ORTHO05D000039 1.1e-07 62.0 212 29.2
PGSC0003DMG400014896 Solanum tuberosum HOM05D000007 ORTHO05D000017 1.1e-07 62.0 204 28.9
SGA_v2.0_scaffold90G27931 Striga asiatica HOM05D012724 ORTHO05D010595 1.9e-07 61.2 93 38.7
AUR62014647 Chenopodium quinoa HOM05D000007 ORTHO05D000017 2.5e-07 60.8 140 30.7
Haze_04106 Corylus avellana HOM05D000007 ORTHO05D000039 2.5e-07 60.8 138 33.3
TWI31G0323 Tripterygium wilfordii HOM05D000007 ORTHO05D000039 2.5e-07 60.8 223 29.1
TWI79G0415 Tripterygium wilfordii HOM05D000007 ORTHO05D000039 2.5e-07 60.8 221 21.3
Aqoxy5G04154 Aquilegia oxysepala HOM05D000007 ORTHO05D000039 3.2e-07 60.5 191 26.7
QL11p053765 Quercus lobata HOM05D000007 ORTHO05D000039 3.2e-07 60.5 291 23.0
CANSAT56G3489 Cannabis sativa HOM05D000007 ORTHO05D000017 4.2e-07 60.1 277 26.7
CANSAT80G1798 Cannabis sativa HOM05D000007 ORTHO05D000017 4.2e-07 60.1 207 28.5
Haze_03011 Corylus avellana HOM05D000007 ORTHO05D000039 5.5e-07 59.7 271 24.7
Peaxi162Scf00037g00084 Petunia axillaris HOM05D000007 ORTHO05D000039 5.5e-07 59.7 255 27.5
Manes.04G085700 Manihot esculenta HOM05D000007 ORTHO05D000039 7.2e-07 59.3 132 28.8
CANSAT64G2524 Cannabis sativa HOM05D000007 ORTHO05D000039 9.4e-07 58.9 171 26.3
Haze_02867 Corylus avellana HOM05D000007 ORTHO05D000039 9.4e-07 58.9 176 30.1
Aqoxy5G04164 Aquilegia oxysepala HOM05D000007 ORTHO05D000039 1.2e-06 58.5 192 29.2
FvH4_1g10030 Fragaria vesca HOM05D000007 ORTHO05D000039 1.2e-06 58.5 230 23.0
MD09G1130700 Malus domestica HOM05D000007 ORTHO05D000039 1.6e-06 58.2 187 27.8
PSO425G0017 Papaver somniferum HOM05D000007 ORTHO05D000017 1.6e-06 58.2 255 23.9
PSO541G4206 Papaver somniferum HOM05D000007 ORTHO05D000017 1.6e-06 58.2 283 26.9
Psat5g016120 Pisum sativum HOM05D000007 ORTHO05D000039 1.6e-06 58.2 230 24.3
Gohir.A10G225666 Gossypium hirsutum HOM05D000007 ORTHO05D000039 2.7e-06 57.4 227 25.6
PGSC0003DMG400005153 Solanum tuberosum HOM05D000007 ORTHO05D000039 2.7e-06 57.4 170 32.4
TWI59G0311 Tripterygium wilfordii HOM05D000007 ORTHO05D000039 2.7e-06 57.4 257 26.1
FvH4_6g33740 Fragaria vesca HOM05D000007 ORTHO05D000017 3.6e-06 57.0 209 25.4
FAN05G1410 Fragaria x ananassa HOM05D000007 ORTHO05D000017 3.6e-06 57.0 209 25.4
FAN09G3678 Fragaria x ananassa HOM05D000007 ORTHO05D000017 3.6e-06 57.0 209 25.4
FAN14G2437 Fragaria x ananassa HOM05D000007 ORTHO05D000017 3.6e-06 57.0 209 25.4
SalBow3G4636 Salvia bowleyana HOM05D000412 ORTHO05D000429 3.6e-06 57.0 190 28.9
PGSC0003DMG400038734 Solanum tuberosum HOM05D000007 ORTHO05D024778 3.6e-06 57.0 208 26.0
Peaxi162Scf00242g00044 Petunia axillaris HOM05D000007 ORTHO05D000017 4.7e-06 56.6 183 29.5
Thecc.07G075500 Theobroma cacao HOM05D000007 ORTHO05D000039 4.7e-06 56.6 255 22.7
C04p61610 Brassica napus HOM05D000171 ORTHO05D000101 6.1e-06 56.2 264 26.1
BolC3t17209H Brassica oleracea HOM05D000209 ORTHO05D000129 6.1e-06 56.2 262 24.0
Haze_03184 Corylus avellana HOM05D000007 ORTHO05D000039 6.1e-06 56.2 245 24.5
FAN02G1298 Fragaria x ananassa HOM05D000007 ORTHO05D000017 6.1e-06 56.2 209 24.9
Medtr4g117550 Medicago truncatula HOM05D000007 ORTHO05D000039 6.1e-06 56.2 253 21.3
Peaxi162Scf00700g00033 Petunia axillaris HOM05D000007 ORTHO05D000039 6.1e-06 56.2 178 28.1
Thecc.06G029600 Theobroma cacao HOM05D000007 ORTHO05D000039 6.1e-06 56.2 222 25.7
SalBow3G4328 Salvia bowleyana HOM05D000412 ORTHO05D000429 7.9e-06 55.8 194 28.4


User provided reference genes

Program Settings